Trichomycterus rosablanca: 134325653
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Entry
134325653 CDS
T09921
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134325653 (dhx32b)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134325653 (dhx32b)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134325653 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
134325653
NCBI-ProteinID:
XP_062863970
LinkDB
All DBs
Position
13:5958553..5969224
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AA seq
728 aa
AA seq
DB search
MARYMDAFEDTGAHRGSDCGDILELNQFDGLPFSSRYYELLKERKTLPVWGAKFKFTTSV
IKNQVVIVSGSAKTGQSTQIPQWCAEFCLSVQYQHGMVVCTQIHQQTTVELALRVADEMD
VNIGHEVGYSIPHQNCCSIDTVLRYCTDDMLLREMMSDPLLEQYAVVLVDQAQERTVSTD
LLLGLLKDVLLARPELRLVILTAPHSADKLLHHYGNVPLIQLEAAQPCEVVHGTGMEGVK
DYLCSALRLALDIHQTEEPGDIVAFLATEQEIECAYAILRREGANVASSLGELKPVLLCP
NQRDKVSFLSKQESQCRRVFLTCGPTEDIFWATHSIHFIIDTGVQKRYVYNPRIRANSIV
IRPISKSQADSRKQLVGSSGKCFCLYPETTPLPSESVPHMLESDITSTVLFLKRMEIAGL
GHCDFIDRPDPEGLMQALEELDYLAALDNDGNLSEIGIIMSEFPMEPQMAKTLLASCEFD
CVSEVLTIAAMLTAPSCFLVPSVEFKQQAAECHQSFSHAEGDHFTLINVYNTYKHHQHST
YYSIEQWCDEQFLSRTALETADAVHAELTDILKRLELPVSSPAFGTKTNTMNIKRALLSG
FFMQVARNIDGTGNYFILTHKHVAQIHPLSGYGTKPAQQKLPEWVLYHEHMLAENNCIRT
ITQISAHEFIQLAPQYFFYNLPSSKSKELLQHIIEQGSAAAQGKSKNKPQSLKSTSSEEQ
SYERCVIQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttatatggatgcttttgaggacactggtgcgcaccgaggttcggactgtggt
gatattctggagttaaaccagtttgacgggcttcctttttcctctcggtattacgaacta
ttgaaagagagaaaaacgcttccagtttggggagccaaatttaaattcacgacctctgtt
attaaaaaccaagttgtcattgtaagtggatcagcaaaaacaggacaaagcacacagatc
cctcagtggtgtgcagagttttgtctctctgtgcagtaccagcatggtatggtggtgtgc
actcagatccaccagcaaaccacagtggaacttgctctgagagtggctgatgagatggat
gtgaacataggacatgaagtgggctacagcatccctcaccagaactgctgcagtattgat
acagtgcttcggtactgtactgacgacatgctgctacgtgagatgatgtcagaccctctg
ctggagcagtatgctgtggtcctcgttgatcaagctcaggagcgtacagtcagcacagac
cttctccttggtttgcttaaggacgtgctgctagcgaggcctgaactgcgccttgttatc
ctcaccgcacctcactccgctgacaagctgttgcaccactatggaaatgtccccctgatc
caactcgaggcagcacagccctgtgaagtggtgcatggcacagggatggagggtgtgaag
gactatctgtgctcggctctccgactggctttggacatccatcagactgaggagcctgga
gatattgtggcatttctggctactgaacaagagattgaatgtgcttatgctatcctgcgg
cgagaaggggccaatgtagcgtcgtcgctaggtgagctcaagcctgtgttgctctgtcca
aaccagagagacaaggtatcatttctgtctaagcaggagagccagtgcaggagagtcttt
ctcacctgtggacccactgaggacattttttgggccacacatagcatccacttcatcatt
gacacgggagtacagaagagatatgtgtacaaccctcgaatcagagccaactccatcgtc
attcgaccaattagcaaaagccaagccgatagccgcaaacagttggttggatcaagtgga
aagtgcttctgtttgtacccggagaccacaccccttccttctgagagcgtacctcatatg
ttggagtctgacatcacttccactgtactttttcttaaaaggatggagattgctgggctt
ggtcactgtgactttatcgataggccagatcctgagggactgatgcaagctttagaagag
cttgattacctggcagctctagataatgatggaaatctatctgagataggaataataatg
tctgaatttcctatggagccccaaatggctaagactctgctagcatcctgcgagtttgac
tgtgtgagtgaggtgcttaccattgctgccatgttaacagctccaagctgtttcctggtt
ccttctgtggagttcaaacagcaggccgcagagtgtcatcagagcttcagtcatgcggag
ggagatcacttcaccctcattaatgtgtacaacacctacaaacatcatcagcacagcaca
tattacagcatagagcagtggtgtgacgaacaattcctgagccgaactgctcttgagaca
gctgacgcagtccatgcagagcttactgatatcctgaaacgattagagctgccagtgtcc
tctccagcatttggcaccaagaccaacacaatgaacataaaacgggcactgctgtccggt
ttcttcatgcaggtggcaaggaacattgatggtacaggaaattacttcatacttacccac
aagcatgtggctcagattcaccctctctctggctatggaaccaaaccagcccagcaaaaa
cttcctgagtgggttttatatcatgagcacatgctggctgagaataactgcatccgaacc
atcacccagatttcagcacatgagttcatccagttggctcctcagtatttcttctacaac
ctgccctctagtaagagtaaagagctactgcagcacatcatcgaacaaggctcagcagct
gcacagggtaagagcaagaacaaaccacaaagtctgaagagcaccagcagtgaagaacag
tcctacgaacgctgtgtcatacagtaa
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