Trichomycterus rosablanca: 134325814
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Entry
134325814 CDS
T09921
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
trn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134325814 (pnn)
03015 mRNA surveillance pathway
134325814 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134325814 (pnn)
03041 Spliceosome [BR:
trn03041
]
134325814 (pnn)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134325814 (pnn)
Spliceosome [BR:
trn03041
]
Complex C
Other components
EJC/TREX
134325814 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
TonB_N
Motif
Other DBs
NCBI-GeneID:
134325814
NCBI-ProteinID:
XP_062864123
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All DBs
Position
13:531113..537019
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AA seq
667 aa
AA seq
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MAVAVRALQDQLEKAKESLKNVDENIKKLTGRDPTELRPGQNRRLSLTGPGVGGGRGRGI
NILRRGLSDGGGGPPAKQRDIEGALLRLAGDQRARRVSRNDSDAEDEDEGKKPALQSSVV
ATSKERTRRDLIQDQTIDEKGKQRNRRMFGLLMGTLQKFKQESTVSTESLKRRHEIEQKL
EVQAEQERKKVDSERRELFEERRAKQTELRLLEQKVELAQLQEEWNMHNAKIMKFIRTKT
KPPLLYLPGRICSATQKLLDESQKKMNAMFEERRQAFAEHLNKMEARPRRQSQRAPKRAA
ESAEERKKEVEDEEEGKQKERLTGKRHDVEMEDEEEEGEDEVEEKEDVVREGEGDGEVQE
MQAEGEKEQQERPHEEEEEKHEAVEKDDRESEGGQAERKEDVKVEAGEDQGVEETMEVEV
AKDLEGEEQKWEQEEEKQEESPVVQEEGNESREREEEEKRAEQEGEKIEVHEESRKSSDN
EMDVQAKTKDPSETEPKVSESDTPSDAVVEPKVESKQPEDDGKPNETAPDPKESEKERGR
PKTKPTKSGSSSSSSSSSSSSSSSGSSSSSSSTSSSSSGSSSSSSTSRSRSRSKEQQRRR
NSDRRKSDRNQKSGKSGGGGGGSHRERKERSKEKDKKRASPEGGSRSGKRSSRSERERKS
DRKDKRR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtgcgagctttgcaggatcagctcgaaaaggcgaaggagagtttaaaa
aatgtggacgagaacattaagaaactgacgggacgcgacccgaccgaattacgaccgggt
cagaacagacggctttccctcacaggaccgggtgtaggtggaggtagaggccgaggaatc
aacatactgaggcgtggactctctgacggcggtggaggacccccagccaaacagagggac
atagaaggggcgctgctgaggttggcgggggatcagcgagccaggagagtttcacgtaat
gacagcgacgctgaggatgaggacgaagggaaaaagccggcgttgcagtcatcagtagtg
gctacctccaaagaacgcacacgtcgagatctgatccaagatcagaccatcgatgagaaa
ggaaaacaaagaaatcgccgcatgttcggcctgttgatgggaacgctgcagaaatttaag
caggagtcgaccgtgtccacggagagcctgaaacgacggcatgagatcgagcagaagctg
gaggttcaggcggaacaggagcgtaagaaagtggacagcgagaggcgggagctgttcgag
gaaaggcgagccaagcagacggagctcaggctcctggagcagaaagtggagctggctcag
ctgcaagaggagtggaacatgcacaatgccaagatcatgaagttcattcgcaccaagacc
aagcctccgctgctctacctgcctggtcgtatatgttcagccacccagaagctcctggac
gagtctcagaaaaagatgaatgccatgtttgaggagcggcgccaggctttcgccgagcac
ctgaacaagatggaggctcggccgaggcgccagtctcagcgcgctcccaaaagggcagcg
gagagcgccgaagagcggaagaaagaagtggaagatgaagaggagggtaagcagaaggaa
aggctgacaggtaaacggcacgatgtagagatggaggatgaggaggaggagggggaggat
gaggtagaggaaaaggaagatgtggttagggagggagagggagatggggaggttcaggag
atgcaggcagagggagagaaggaacagcaagaacgtccacatgaggaggaggaggagaaa
cacgaagctgtggagaaagacgacagggagtcggagggaggccaggcagagcggaaggaa
gatgtgaaggtagaagctggtgaggatcagggggtggaggagacgatggaggttgaggta
gcaaaggatctagagggagaggagcagaagtgggagcaggaagaggagaagcaggaagag
agtccagttgtgcaggaggagggtaatgagtctagagaaagggaggaggaggagaaacgg
gcagaacaggagggggagaagatagaagtccacgaggagtctcggaaatcctccgataac
gaaatggacgtccaagctaaaacgaaagacccgtctgaaacggaacccaaagtgagcgaa
agcgacacgccctcagacgctgtagtcgagcccaaagtcgaaagcaaacaaccggaggac
gatgggaaaccgaacgaaaccgccccggacccgaaggagtcggagaaggagcgaggccgc
cccaaaaccaagcccacaaagagcgggagcagcagctcctccagcagttcctcctccagt
tcttcctccagcggctccagcagctcctccagtagcaccagcagctcctcgtcgggctcg
tcctcgtcgtcgtccacctccaggtctcgcagccgcagcaaagagcagcagcgccggcgg
aattccgaccgcaggaagagcgaccgcaatcagaagagcggtaaaagcggcggcggtggc
ggtggcagccatcgagagcgcaaggagaggtcgaaagagaaggacaagaagagggcgagt
cctgagggggggagcaggtcggggaaacgctcgtcacgcagcgaacgggaacgcaaatct
gatcgcaaagataagcggcgttag
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