Trichomycterus rosablanca: 134325998
Help
Entry
134325998 CDS
T09921
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trn03016
]
134325998 (tarbp1)
03036 Chromosome and associated proteins [BR:
trn03036
]
134325998 (tarbp1)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
134325998 (tarbp1)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
134325998 (tarbp1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
134325998 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
134325998
NCBI-ProteinID:
XP_062864262
LinkDB
All DBs
Position
14:complement(36082477..36110146)
Genome browser
AA seq
1570 aa
AA seq
DB search
MSSFLIRSLMSHCPDVDQTLEELCWSGSSMPDPERIEALGLFLREMSSRSQERSCQVEPV
LWNQCVPLLKMLSSDGVVHHARRKEMLQAACDLLGVCVRQCEADVLEKIADIALPALDLS
EKSEKILDVDVALEVLSVLLSCCSSNPGLLMRSISCTLTSLKELPDPLVSKVIIRVWFPT
FKTSGEATRGDLLQHIWTDLLGWYEQQDTDAGTPRVLVCLTALSDHLFAPGDGQEAWNGP
DPCADQAFFRMLQAGLVDPDGLSRKRALYLLKRCVSLAEGRNAHVDGTLFRWRPGSSARY
RRFWEDYALVLETLEEYQIHVVRPVLSRIDTLVQAAATTTSQGGELLHPTWLLCIYRRMF
HSENKAVVKEGVGHFLDLRQASFASAFSPVVVGPLMDVLAETSLYHRSAGEALEKCPEIG
TKLQDFLATFFSSLPEDERGSTLLRLLRRLGSRHWYAVPLLFVCRAVSHLPPRPLLGADG
LHALRELLRSAMITHQVPLRRATQRFLLHAALRLTDVTGVSLDDVFVFLSHFRADKSLRR
GTRLWREVCDWLLVNERLFGAAEASEGAPPRDVWAHSSRRLTDYLSVPASSDETVTLPSA
DEAEPLACALLLCADLPEGAERGGLDRLLSPLLDVLRRLDSGVYLPLRKSDRSTRLTLQL
LRLIQGNEDEVAGRVRALVAGVAEPVQEFVLRRLSGELQQPEDVDRAGLYLSLLRALVRT
CSAAPGYVSNLEKNYVPRLVANCLRTLTETPGQNPSMAGQVQKAASMAALASLCQLAEDR
LLDPESVAVTSLRSLAAALFCSSSSPQRFNRTLVKPHAPAAAVPGGRTDDGPALKDWGRV
VAGFIRDQWACLCFLQDVLDPPSSAAAFRAAVQALALLPSDLVLPVLDFMRSALPQMLPH
EEAACAEAISVSWRLVRALGVNAHDFWPTLRSFVRLAFQRRVLELKEDGRSGGVASCVRQ
VKDELLELSRSKSGVFNVLIRHCCSTWYPPDPAGRTGEAFRSALRHADLLTEACVYGPVS
RRDQRVLQEVETYVRNLETECEAEATLPSESRDDQFPRVCVVTFLNRLEPSDDLHRALME
ELVRRLLRKDEDVSRSKVRYYSNSLQHRVKNRAWQTVLLLLPKLRPEFVAEGVVGPACEA
GFRCNQASVKYLMEWALILILHRDPSQIERLWGCFDADQEKTRTSVCTFLSVLVHLEVFL
PRLEDKARQWRRAVEVILLWCFSHNFSVRLYALLALKRVWALRDAPVLAGCREGVAASPD
GLAAVVEACLDQAEAAQNTGNANKNWSRIQEHFFFSRFHPVHDHSLETIFHAFPRLSELA
DDECVPAWKFGTSADPGPGGSAPVRNPGGGLRELRPGDWIQQDRGDPGAESEAEARRADV
QKKIAPWSLSVREQEPQLTAQQRAARLGKPGGGLLVVASLIDKPANLGGLCRTCEIFGAS
ALVLGGSHHISDRQFQALSVSSELWLPLLEVKPNDLPAFLQQKKNEGYSIIGVEQTANSQ
SLESYRFPQKSLLLLGNEREGIPADMLQWLDVCVEIPQRGVTRSLNVHVSAALLVWEYTR
QHSAPNEALH
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatttctgatcagatctttgatgtctcactgtccagatgttgaccagacgctg
gaggaactgtgctggtcaggttcttccatgcctgatccagagagaatcgaagctcttgga
ttgttcctgagagagatgagcagtagatcgcaggaacgaagctgtcaggtggaaccagtt
ctgtggaaccagtgcgtcccacttttgaagatgctctccagcgacggtgtggtccatcac
gccaggaggaaggagatgctgcaggctgcttgcgatcttctcggcgtttgtgtccgacag
tgcgaagctgacgttctggagaagatcgccgatattgctctgcctgctctggatctgtct
gagaagtctgagaagatcctggatgttgacgtcgccctcgaggtcctatccgtcctgctt
tcgtgttgttcttcaaaccctggtttgctcatgagatccatctcatgcaccctgacgtcc
ttgaaggaacttccagacccattggtgtccaaggtcatcatccgtgtgtggttcccaacc
ttcaaaacatctggagaagccaccagaggagacctcctgcagcacatctggacggatttg
ctgggctggtacgaacagcaggacacagatgcgggaacaccccgagtcctggtgtgtctc
acggctctttctgaccacctctttgctcctggagacggtcaggaagcttggaatggaccg
gacccatgtgctgaccaggctttcttcaggatgcttcaagccggactcgtagacccggac
ggtctgtccaggaagagagcgctgtatctgctgaagaggtgcgtctcactggccgaggga
cgcaacgcgcatgtcgacgggacgttgttcaggtggaggccgggcagtagcgcgcggtat
cggaggttttgggaggactacgcgctcgtcctggagacgctggaggaatatcagattcac
gtcgttcgacccgttctcagccgaatcgacactctcgtccaggcagcggcaacaacaacc
agtcaaggaggtgaactgctccatcccacgtggttgctctgtatctatcggcgcatgttc
cacagtgagaacaaggcggtggtgaaggagggagtcggtcacttcctggaccttcggcag
gcgtccttcgcctcggcgttctccccggtcgtcgtgggtcccctgatggacgtcctggct
gagacgtcgctctaccacaggtcggccggagaagctctggagaaatgtccggagatcgga
acgaaactgcaggacttcctggccacgttcttcagcagcctgcccgaggacgagcgcggt
tcgacgttgctgcggctgctccggcgtctgggttcccggcactggtacgccgtgccgctg
ctcttcgtctgccgtgccgtctcccacctgccgccccgccctctcctcggagccgacggc
ctgcacgctctcagagagctgctccgctcggctatgatcactcaccaggttcctctgaga
agagccacgcagcgcttcctgctccacgccgccctccgcctgaccgatgtgacgggcgtg
tctctggacgacgtcttcgtgttcctgtcgcatttccgggcggataagtccctgcgtcga
ggcacccggctctggagagaggtctgtgattggctgctggtcaacgagcggcttttcggc
gccgccgaggcctctgagggcgctccgccgcgggacgtctgggcgcactcctcccgccgt
ctgacggactacctgtcggtcccggccagctcagacgagacggtcaccctcccgagcgcg
gacgaagccgaaccgctggcctgcgccctcctcctctgcgccgacctgcccgaaggagcc
gagcgcggcggcctggaccggctgctgtcccctctgctggacgtcctgcggcgcctggac
tcgggcgtctacctcccgctgcgcaagagcgaccggagcacgcggctcacgctgcaactc
ctgcggctcatccaggggaacgaggacgaggtggcgggtagggtgagggcgctggtggcg
ggcgtggcggaacccgttcaggagttcgtgctcaggcggctgagcggagagctgcagcag
ccggaggacgtggaccgggcggggctgtacctgtccctgctacgagcgctcgtgaggacg
tgcagcgccgcgcccgggtacgtctccaacctggagaagaactacgtcccgaggctggtc
gccaactgcctgaggacgctcacggagacgcccggtcagaacccctccatggcggggcag
gtgcagaaagccgccagcatggccgcgttggcgtcgctgtgccagctcgccgaggaccgc
ctgttggacccggagtcggtcgccgtgacgtccctgcgctcgctcgccgccgccctcttc
tgttcgtcgtcgtcgccgcagcgattcaaccggaccctggtgaagcctcacgccccggcg
gcggccgtcccggggggtcggacggacgacgggccggcgctgaaggactggggccgggtg
gtggccggattcatccgggaccagtgggcgtgtctgtgctttctccaggacgtcctcgac
cccccgagctccgcggcggcgttccgggcggcggtccaggctctggccctgctcccctcc
gacctggtgctgccggtgctggacttcatgcgttcggctttaccgcagatgctcccgcac
gaggaggcggcgtgcgccgaggcgatatcggtctcctggaggctggtccgggcgctgggc
gtgaacgctcatgacttctggcccaccctgcgttccttcgtgcggctggctttccagcgc
cgcgtcctggagctgaaggaggacgggaggagcggcggggtggcctcctgcgtacgacag
gtgaaggacgagctgctggaactctcccggtccaaatcgggcgtatttaacgtgctgatc
cggcactgctgcagcacctggtacccgcccgaccccgccgggcgcacgggcgaggccttc
cggagcgccctccgccacgcggacctgctgaccgaggcctgcgtgtacgggccggtctcc
agaagagatcagagagtcctgcaggaggtggaaacctacgtgaggaacctggagacggag
tgtgaagctgaagccaccctacccagcgagagtcgggacgatcagttcccgcgcgtttgc
gtcgtgaccttcctgaatcgtctggaaccctccgacgacctgcaccgggcgctgatggag
gagctggtgcggcgtctgctgagaaaggacgaggacgtgtcgaggtcgaaagtgcgttac
tatagcaactctctgcagcatcgggtgaagaacagggcgtggcagacggtgctgctgctg
ctgcccaaactgaggccggagttcgtggcggagggcgtggtcggcccggcgtgcgaggcg
gggttccgctgcaaccaggcgtccgtcaagtatctcatggaatgggctctgatcctgatc
ctccaccgggacccgtctcaaatcgagcgcctgtggggctgcttcgacgcggatcaggag
aagaccaggaccagcgtctgcaccttcctgtccgtcctggtccacctcgaggtcttcctg
cccagactggaggacaaggcccggcagtggcggagggccgtggaggtgatcctgctctgg
tgcttcagtcacaacttcagcgtccgtctgtacgccctgctggccctgaagagggtctgg
gccctgagggacgctcccgtcctggccggatgtagagagggggtcgcggcgtctccggac
gggctggcggcggtcgtggaggcgtgtctggatcaagccgaggccgcgcagaacaccggc
aatgccaacaagaactggtccagaatccaggagcacttcttcttcagccgcttccacccc
gtccacgatcacagcctcgagacgatattccacgccttcccgcggctgtcggagctggcg
gacgacgagtgcgtgcccgcctggaagttcgggacgtcggcggacccggggcccggcggc
tcggcccccgtgaggaacccgggcggcgggctgagggagctgcggcctggggactggatc
cagcaggacagaggcgacccgggggcggagtcggaggcggaggcgcggcgggcggacgtg
cagaagaagatcgccccctggagcctgagcgtgcgcgagcaggagcctcagctgacggcg
cagcagcgggcggcccgtctgggcaaaccgggcggcggcctgctggtggtcgcctcgctc
atcgacaagcccgcgaacctcggcggtctgtgtagaacatgcgagatcttcggagccagc
gctctggtcctgggcggctcgcatcacatcagcgacagacagttccaggccctgagcgtc
tcgtctgagctctggctaccactgctggaggtcaaaccgaacgacctcccagcgtttcta
cagcagaagaagaacgagggttactccatcatcggtgtggagcagacggctaacagccag
agtctggaatcgtaccggttcccacagaagagcctcctgcttttagggaatgagagggag
gggatccccgccgacatgctgcagtggctggacgtgtgcgtggagattcctcagcggggg
gtgacgcgatcgctcaacgtgcacgtcagcgccgccctgctggtgtgggagtacacccgg
cagcactcggccccgaacgaggctctgcactga
DBGET
integrated database retrieval system
