KEGG   Trichomycterus rosablanca: 134326085
Entry
134326085         CDS       T09921                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:trn03036]
    134326085 (kdm4c)
Enzymes [BR:trn01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     134326085 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     134326085 (kdm4c)
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    134326085 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 Tudor_5 Rad9_Rad53_bind PHDvar_NSD DUF7141 LBR_tudor
Other DBs
NCBI-GeneID: 134326085
NCBI-ProteinID: XP_062864359
LinkDB
Position
14:complement(3919049..3942319)
AA seq 1244 aa
MAGVGANASTNPACKIMTFRPTMEEFRDFNQYLVYMESQGAHRAGLAKVIPPNGWKPRRC
YDDIDDLIIQAPIQQMVAGQSGLFTQYNIQKKPLAVQEFRRLANSDQYCTPRYLNYEDLE
RKYWRNLTFVPPIYGADVSGTLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFTWHTEDMDLYSINYLHFGEPKFWYAIPPEHGKRLERLATGFFPNSFKSCEAFL
RHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYSYHAGFNHGFNCAESTNFASLRWID
YGKVATQCMCSRDMVKISMDPFVRHFQPDRYQAWTQGKDTCPLDHTLATPLTTPELQTWL
QRRQKKGQKSNKRVRQPCTRSKRLKTVQQPVAVENETTRQGNQGNQDEKEAQLKKDDKLH
NAVQIPGPAGLCQQACFVKVTRVERDLLARSSKSQRDSSEEPSDDCQPIKQSQSETADCQ
DNVLSDVPSKKALETNRSLMSTENAANESTSSNLLTKPHRGSDDADDTASPDRISESTAR
PTVTKLDEESPAVTVEKSGAPSSDMPLLTPECAEQDGPSNTLHQMCEMPFLTLAVQSSNK
TPLDDSNTSAEPSTLLKKRPPPNETNTKPLYSDLSSYSDTKNDMPDLLMMPSSSCSDATP
YQASPSTTAPHVMCAEPHRHQVESPDPTGPPDTCVNFTNLERAVYHSGTKLSEAPDRPCR
SQVADQCDASVGRGEDSTGESGEEDSTSEGEYGSMESADDSNYRLHSVKRRTAKSRRHPL
RKPTARAVPSAVKQQDNSDDEHMEEGSADGEQQEDDLWARSLVHLWHNRKFHFPSEREYN
STAAKTAPHCAVCTLFMPYYQPEERADESRPDVPVSVGKVAARSRPLIPEICFAYREGSC
PPSTSLEEDGSSPLVSCRSCCVQVHASCYGIGADEVSQEWMCDRCSCGDLTAECCLCNLR
GGALKRTADNRWAHVMCAVCLPEVKFLNIVKRSPVDVGAVPAQRYRLKCIYCHKRMKKWA
GACIQCSCGRCPTSFHVTCAHAAGVTMEPDDWPYVVFVICHRHQSRSSSAKSKASGTELA
LGQTVIAKHKNLRYYSCRVTQATTQTFYEVMFDDGSFSNDTFPEDIVSRDCAQLGPPEVG
EAVQVKWPDGLFYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVKGRLST
ASSMRFEDAFFTTQGERKRHRTPNSRFQNDYVANLSPRTCSKSN
NT seq 3735 nt   +upstreamnt  +downstreamnt
atggcgggcgttggggcgaatgcctcgactaaccctgcatgtaaaatcatgacctttcga
cccactatggaggagtttcgggactttaaccagtatctggtgtacatggagtcgcaggga
gcgcatcgtgccggactggccaaggtgatcccgccaaatggctggaagccgaggcgatgc
tacgatgacatcgacgacctcatcattcaggcgcccattcagcagatggtggccggccag
tcggggctcttcacgcagtacaacatccagaagaagccgctcgcagtgcaggagtttcgc
cgactggctaacagcgatcaatactgtacaccacgctacctgaactatgaagacctggag
agaaagtactggaggaatctgaccttcgtgccacccatatacggcgcagacgtgagtgga
acgctgtacgatgaggacgtagaggagtggaatatcgggcacctgaactccatcctggac
gtaatcgaagaggactgtggggtctccatccagggtgtcaacacgccatacttgtacttc
ggcatgtggaagacgagcttcacctggcacacagaggacatggacctctacagcatcaac
tacctgcattttggagaacccaagttctggtacgctattcccccggagcatggaaagaga
ctggagcgactagccacaggcttttttcctaacagcttcaagagttgtgaagcttttctc
agacacaagatgaccctcatatctccctctgtgctgaagaaatacggcatcccattcgat
aagattacacaggaagctggggagttcatgatcacgttcccgtacagctaccacgccggc
tttaaccatggcttcaactgcgctgaatccaccaactttgccagcctgcgctggatcgac
tacggcaaagtggccactcagtgcatgtgcagtagggacatggtcaagatctccatggac
ccattcgttagacatttccagccagatcggtaccaggcatggacgcagggcaaagacacc
tgcccgctggaccatacgctggctacacccctcaccacacccgagctccaaacgtggctc
cagagacgccagaaaaaaggccagaaatccaacaagagagtccgccagccttgcacgcgc
tccaagcggctgaagacggtgcagcagccggttgctgtggagaacgagactacgaggcag
ggaaaccagggaaaccaggatgagaaagaagctcagctgaaaaaagacgacaaactccac
aatgcagtgcaaatcccaggccccgccggtctttgtcagcaggcgtgttttgtcaaggta
acgcgcgttgagcgcgatttattggcccgctcatctaaatcccagagagactcgtccgaa
gaaccatccgatgattgtcaacccattaaacagtcccagtctgagactgcagactgtcag
gacaacgtgctctctgatgttccttcgaaaaaggccttagaaaccaaccggtcccttatg
tccacagagaacgccgctaatgaatcgacatcttccaatctgctcaccaaaccccaccga
ggttctgatgatgctgacgacacggcaagtccagatcggatcagcgagtcgaccgcacgt
cctacagtaacgaagctcgatgaggaaagtcctgcagtcactgttgaaaagtctggagcc
ccttcgtccgacatgcctctcttgaccccggagtgtgcggagcaggacggaccaagcaac
actttgcatcagatgtgtgaaatgcccttcctgaccctagctgttcagtccagcaataaa
acacctctggatgattcaaatacttctgcagaaccatcgaccctcctaaagaaacgtcca
ccgcctaacgaaaccaacacaaagccactttattctgatttaagtagttattcagacact
aaaaatgatatgccggatttattaatgatgcccagcagcagctgtagcgatgcaactcca
tatcaagcctcacccagtacaacagcgcctcacgtcatgtgtgcggagcctcaccgccac
caggtcgaatctcctgatcctacaggccctccggacacgtgcgtgaacttcactaacctg
gagcgtgcggtgtaccattcaggcacgaagctttcggaagctccagacaggccgtgcagg
tcgcaggtcgcagaccagtgcgatgcgtcggtcgggagaggggaggacagtaccggcgag
tccggtgaggaggacagcacgagcgagggcgagtatggaagcatggagtcggctgacgac
agcaattaccgtctacactcggtgaagagaaggacagccaagagtcggcgtcaccccttg
aggaagccaacagcgagggcggtgcccagtgcggtcaagcagcaggacaacagcgatgac
gaacacatggaagagggatctgcagacggagagcagcaggaagatgacctctgggccagg
tctctggttcatctctggcacaacagaaagttccactttccctccgagagagaatacaac
agcacagcggctaaaaccgccccacattgtgctgtctgcaccctcttcatgccttattat
cagcctgaggagagagcggacgaaagccgacctgatgtgccagtgagtgtggggaaggtg
gcagcgaggtcgagacccctcatccctgaaatctgctttgcatatcgtgagggctcgtgt
ccccccagcacatctctagaagaggatggatccagtcctcttgtgtcctgcagaagctgc
tgcgttcaggttcatgccagttgctacggcattggtgctgatgaggtcagtcaggagtgg
atgtgtgaccgctgttcctgtggagatcttacagctgagtgctgtttgtgtaacctaaga
ggtggtgcattaaaaagaaccgcagataacagatgggcccatgtgatgtgtgccgtgtgt
cttcctgaagtgaaatttctcaatatagtgaagagaagtccagtcgacgtcggtgctgtt
cctgcacaaagatacagactgaaatgtatatattgtcataagcggatgaagaagtgggca
ggtgcgtgtattcagtgctcctgtggtcgttgtcccacctccttccacgtcacgtgcgct
catgccgctggagtcaccatggagccggacgactggccgtacgtggtgttcgtcatctgt
cacagacaccagtcgcggagctccagcgctaaatcgaaggcgagtggaaccgagctagcg
ctgggacaaacggtgatcgccaaacacaagaacctgcgctactacagctgccgtgtgacc
caggccaccacgcagaccttctacgaagtcatgttcgacgacggctccttcagtaacgac
accttccccgaggacattgtgagccgagactgcgcccagcttggacctcctgaggtcggc
gaggccgtgcaggtgaaatggccggacggactcttctatggagctaaatatctgggttcc
aacacctcgtacatgtatcaggtggagtttgaggatggctctcaggtgcttgctaagaga
gaggacatttataccctggatgaggacctgcccaagaaggttaaaggtcgcctttccaca
gcctccagcatgcgtttcgaggacgccttcttcaccacgcagggcgagcgcaagcgccat
cgcacccccaactctcgattccaaaacgactacgtggcgaacctgagccctcggacctgc
agcaaaagcaactga

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