Trichomycterus rosablanca: 134326613
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Entry
134326613 CDS
T09921
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134326613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134326613
03016 Transfer RNA biogenesis [BR:
trn03016
]
134326613
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
134326613
Messenger RNA biogenesis [BR:
trn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
134326613
Transfer RNA biogenesis [BR:
trn03016
]
Prokaryotic type
tRNA degradation factors
134326613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
134326613
NCBI-ProteinID:
XP_062864845
LinkDB
All DBs
Position
14:complement(13200872..13224526)
Genome browser
AA seq
767 aa
AA seq
DB search
MRCLFKLGSVLPRLNGRCFGRSVWSGHGAERKVGVELEGRKLEISTGKFARFADGCSVVQ
LGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDFEILTSRLI
DRSIRPLFPAGYFYDTQILCNILAVDGVNDPDVLAINGASAALATSDIPWNGPIGAVRIG
LVDGEFLVNPSRKEMSSSILNLVIAGAPSSQVVMMEAAAENVLQQDFCHAVKLGVKHTQQ
IIHAIQQMAREMKVVKRTPQKLFNAPVEIVEYTRQVASDKIYAIFTDFSHDKVSRDEAVN
KVRLDTEEEVRGKFPQAETFDVIEAFNVVSKEIFRNLVLNEFKRCDGRDLTSVRDISCEV
DVFKPLHGSALFQRGQTQVLCSVTFDSIESSVKPDLITTALSGIKDKNFMLHYEFPPYAT
NETGKVGGINRRELGHGALAEKSLRPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAVGLISKPNPDKPTEIQDYRLLTDILGIEDYNGDMDFKMAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKTITKPRASRKENGPLVENVRVP
ISRRARFVGPGGHNLRRLQAQTGVTISQVDEETFSVFAPTPHAMNEAQEFITEVCKDDQE
QQLEFGAVYTATITEIRDIGVMVKLYPNMSPVLLHNSQLDHKRIKHPTALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAASVVKTLSERQSISMGPAVDSQAS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtttatttaaactgggctcggtgttaccgcggctgaatggacggtgctttggg
aggagtgtgtggagcggtcacggagctgagaggaaagttggagtggaattagagggcaga
aaactggaaatatcgacagggaagtttgccagatttgctgatggctgctctgttgtacag
cttggtgagacctctgtgatggtcactgccgtcagcaagacaaaaccgtcaccatcccag
ttcatgcccctcgtggtggattacagacagaaagcagcagctgctggaagaatccccacc
aactacctgagacgagagctgggcaccactgattttgagattcttaccagcagactcata
gatcgttctatcaggccgctttttcctgctggttacttctatgatacacagatattgtgc
aacattttagctgttgatggtgttaatgacccagatgtgcttgccattaatggagcatct
gctgctcttgctacctcagatattccctggaatgggcctattggcgcagtgcgcatcggc
ctcgtagacggggagtttctcgtaaacccgtcacggaaggagatgagctccagcattctg
aacctagtgatagcaggagctccttccagccaagtggtgatgatggaagcagcggctgag
aacgtgctgcagcaagacttctgccatgctgtcaaactgggagtgaaacacacgcagcag
atcatccatgccatccagcagatggccagagagatgaaagtggtcaagcgcacaccacaa
aaactgtttaatgcaccggtggagatagtggagtacacacgacaagtggctagcgacaag
atctatgctattttcacagatttttcacatgacaaggtttccagagacgaagctgtaaac
aaagtccgactggacacagaagaagaggttagaggaaagtttcctcaagcagaaaccttt
gatgtgattgaggcctttaacgtagtgtctaaggagattttccgtaatttagttcttaat
gaatttaaaaggtgtgatggaagggacctgacatctgtaagagatatttcatgtgaggtg
gatgtgttcaaaccactgcatggctctgcgctttttcaaagaggtcaaacccaggtactc
tgtagtgtaacgtttgattctatagagtccagtgtaaaaccagatcttataaccacagct
ttaagtgggattaaggataagaatttcatgctgcactatgagtttcctccttatgcgact
aacgagactggtaaagttggtggaataaacagaagagaactcggtcacggggcactggct
gaaaaatcgttgagaccggtcattcctaaagacttcccattcacaatacgtgtcacctcc
gaggtgctggaatccaacggctcgtcgtctatggcatctgcatgtggaggcagtctagct
ctaatggatgcaggtgtcccaatctcttcagctgtggctggggttgcggttggtctcata
tctaaacccaacccagacaaaccaactgaaattcaggactatagattattaacagatatt
ttgggaattgaggactataatggagacatggactttaaaatggcaggaaccaacaagggc
atcactgctctacaggcagatgtaaagatacccgggttgcctctaaaagtcgtgatggag
gcaatacagcaggcaacagtggccaaaagagaaatcttaggcatcatgaataaaaccatt
acaaaaccaagagcctcccgcaaggaaaacggtccactcgttgagaacgtgcgtgtaccg
atctccagaagagctcgcttcgtcggtcctggaggacacaacctccgcaggttacaagct
cagacaggtgtaacaataagccaggtggacgaggagaccttctcagtttttgccccaacc
cctcacgctatgaatgaagctcaggagttcatcactgaagtctgcaaagatgaccaagaa
cagcagcttgaatttggagcggtgtacacagcaaccatcacagaaataagggatattggt
gttatggtaaagctgtaccccaacatgagtcctgtactactccacaactcacagcttgat
cataaacggataaaacaccctactgctcttggactagaggttggccaacaaatccaggtg
aagtattttggacgtgaccccacggacggcaggatgaggctatcgcgtaaggtgctccag
tctcctgcagcctcagtggtgaagactttaagcgagagacagagcatcagcatgggacca
gcagtggacagccaggcatcttga
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