Trichomycterus rosablanca: 134326632
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Entry
134326632 CDS
T09921
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04517
IgSF CAM signaling
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134326632
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134326632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134326632
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134326632
Intermediate filaments
Intermediate filament-binding proteins
134326632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
DUF7854
Motif
Other DBs
NCBI-GeneID:
134326632
NCBI-ProteinID:
XP_062864868
LinkDB
All DBs
Position
14:complement(36503189..36549556)
Genome browser
AA seq
2344 aa
AA seq
DB search
MTTVAADYDHVEIQQQYGDAHNRWEVEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSSRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDSKEKKSAKDALLL
WCQMKTAGYPNVNVHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVEHPDEKSIITYVVTFYHYFSKMKALKVEGKRIGKVLDSAVETE
KMIERYESLASELLEWIEQTIIILNNRRFANSLVGVQQQLQAFNSYRTVEKPPKFTEKGN
LEVLLFTTQSKMRANNQKAYTPREGKLISDINKAWERLEKAEHERELALRTELIRQERLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDISAYEERVQAV
VGVASELEAESYHDIKRVAARRDNVLRLWSYLQELLRARRQRLELNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAAQADRVRAVNANARKFADDLEAG
YKPCDPQVIHDRVAHMEFCYRELTQLAAERRGRLEESRRLWRFFWEMAEEEGWIREKEQI
LSSDDRGKDLTAALRLLSKHRAFEDERSGRAGRLQLTARQGEELVAAGHFGAEKIGRRVD
DVREQWAALERLSAARKTRLQEACSLHQFQADADDVDAWMLDALRIASSADVGHDEFSAR
ALVKKHKDVAEEMDGCRPVLDALREQADALPEERARAADAGGRLAGVEERYGELAELTRL
RKQALQDALAFYKMLSEADACELWIHEKEQWLHGVKIPEKLEDLEVIQHRFESLEPEVNS
QASRVAVVNQIARQLIHSGHPSEKDIKIQQDKLNTRWGQYRDLVDQKKDALSSALGIQNY
YLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLAAIEDKMADLEKEAD
RLAGEHPARAPGIKGHVGEIEDVWKEMKETLRAREESLGEASKLQKFLRELDDFQAWLSR
TQTAVASEDVPNALAEAEKLLAQHEGIKNEIGNYLKDYRRIRDTGEAVTRGQTEAQYMFL
NQRLQALDTGWTELQEMWENRRKLLSQSHAYQLFLRDAQQAETFLNNQEYVLAHTELPAT
LEGAEGAVKKQEDFMTSVDANEEKISGVAESGRRLADEGNVSAERIREKAASVDQRHKKN
REAARELLTKLKDNRDLQSFLQECQELSLWIGEKMLTAQDVTYDEARNLHSKWLKHQAFM
AELRSNKEWLENIHKAGTALVAEKPDTEGVVRDKLESLKKTWDELESSTETKAQRLFHAN
RAELFTQSCTDLDKWLAALEERIRSDDFGKDLTSVNILLKKHQILESQVEVRQKEVEELR
SQAQALSQEGKGSDEVDGLRRGVEEKFHHLQDPLKRRWSNLTASKEIHQFKRDVEDEILW
VEERMPMATSTEHGSNLQSVQLLIKKNQTLQREIQGHQPRYDDVFQKSAHVLKEGGGGGG
GEEVIRQRLDELRRLWGSVRDEAERRRGRLEEAHEAQRYYFDAGEAEAWMSEQELYMMSE
EKAKDEQSSVAMLKKHQILEQALEDYAQTVHQLSRTSRALVTAGHPESERIGMRQSQVDK
LYAGLKDLAEERRGKLEERARLFQLNREVDDLEQWISEREVVAGSHELGQDYEHVTMLQE
RFREFARDTRNTGQERVDAVNGMADGLIDGGHADAAAAAEWKDGLNEAWAELLELMDTRT
QILAASYELHRFHHDAREVLGRVSDKRRKIPEELGRDQNTVEALQRAHHAFQHDVQALGS
QVKQLQDDAARLQSSYAGDKAEDIRRREAEALDAWRSLLEACDARRARLLDAADKFRFLS
LVRDLVLWMEDVVRLIHAQEKPRDVSSVELLMNNHQGIKAEVDARNDSFTSCVDLGNALL
SRKHYASEEIEEKLRQLTEKRKHMIERWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQEP
YLSGREVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRQQQEEEEER
RRRRQDAAAAAAAEEAPPTEEVSPQPREGEQVSQNGPPAQQDPPRQEDAGGADAVNGVPE
PSPGSSPTAGRKGEAAAASRAATLPSEARDAAAAAMEGFLNRKHEWEGHNKKASNRSWHN
VFCVIKNLELGFYKDSKSAGQGVPYHGQVPISLTDSACEVALEYKKKKHVFKFRVSDGNE
FLFQAKDADEMNSWIQAISCKTPSETSALSSRAQTLPTPSGTAESSPGKREKDKEKRFSI
FKKK
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggcggcggattacgatcacgtggagatccagcagcagtacggcgacgcc
cacaaccgctgggaggtggaggagtgggacaacgagaacagctccgcccgtctgttcgag
cgctctcgcatcaaagcgctcgcagatgagcgtgaggcggtgcagaagaagaccttcacc
aaatgggtgaactctcacctggcccgggtctccagccgcatcaccgacctgtacatggac
ctgagggacggtcggatgctgatcaagctcctggaggtcctgtccggagagagactgccc
aagcccaccaaaggccggatgaggatccactgtctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgtccacctggagaacatgggctcccacgacatcgtggatgga
aaccaccgcctcaccctgggtctcatctggaccatcatcctgcgcttccagattcaggac
atcagcgtggagacggaggacagcaaggagaagaaatccgccaaggacgctcttcttctg
tggtgccagatgaagactgcagggtaccccaacgtcaacgttcacaacttcaccaccagc
tggagggacggcatggctttcaacgccctgatccacaaacacaggcccgacctgatcgac
tttgacaagctgaagaaatcaaacgctcactataacctgcagaacgccttcaacctggcc
gagcagcacctgggtctcaccaagcttctggaccccgaggatatcagcgtggagcaccct
gatgagaagtccatcatcacctacgtggtgaccttctaccactacttctccaagatgaaa
gcgctgaaggtggaggggaaacggatcgggaaggttctggacagcgcggtggagacggag
aagatgatcgagaggtacgagtctctggcctccgagctgctggagtggatcgagcagacc
atcatcatcctcaacaaccgcaggttcgccaactcactggtgggcgtccagcagcagctc
caggccttcaacagctaccggaccgtggagaaaccgcccaaatttacagaaaaagggaac
ctggaggttctgctcttcaccactcagagcaaaatgcgagccaacaatcagaaagcgtac
acgccgcgggaggggaagctcatctccgacatcaacaaggcgtgggaacgcctggagaag
gcggagcacgagcgggagctggcgctgaggaccgagctgatccgtcaggagcggctggag
cagctggcgcgccgattcgaccgcaaggcggccatgagggagacctggctgagcgagaac
cagcgcctcgtctcacaggacaacttcggcttcgacctgcaggccgtggaggcggccacc
aagaagcacgaggccatcgagacggacatctcggcgtacgaggagcgggtgcaggcggtg
gtgggcgtggcctccgagctggaggcggagagctaccacgacatcaagcgcgtggcggcc
cggcgggacaacgtgctgcggctctggagctacctgcaggagctgctgcgggcgcggcgc
cagcgtctggagctcaacctgggcctgcagcgggtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctctctcaggattatgggaagcacctcctg
ggcgtggaggacctcctgcagaagcacgcgctggtggaggccgacatcgccgcgcaggcc
gaccgcgtcagagccgtcaacgccaacgcccggaaattcgccgacgatttggaagcagga
tacaagccctgcgacccgcaggtaatccacgaccgcgtggcgcacatggagttctgctac
cgggagctgacgcagctggcggcggagcgccggggccgcctggaggagtcgcgccgcctc
tggaggttcttctgggagatggcggaggaggagggctggatccgggagaaggagcagatc
ctgtcgtccgacgaccgcgggaaggacctgacggcggcgctgcggctgctcagcaagcac
agggcgttcgaggacgagaggagcgggcgcgccgggcgcctccagctgaccgcacggcag
ggcgaggagctggtggccgccgggcatttcggcgcggagaagatcggccggcgcgtcgac
gacgtccgggagcagtgggcggcgctggagcggctgtcggcggcgcgtaagacccgcctt
caggaggcgtgttcgctgcaccagttccaggcggacgccgacgacgtggacgcctggatg
ctggacgcgctgcgcatcgcgtccagcgccgacgtgggccacgacgagttctcggcccgg
gcgctggtcaagaagcacaaggacgtcgccgaggagatggacggctgccggcccgtgctg
gacgctctgcgcgagcaggccgacgcgctgcccgaggagcgggcccgggcggccgacgcc
ggcgggcgcctggcgggcgtggaggagcgctacggcgagctggcggagctgacccggctg
aggaagcaggcgctccaggacgcgctggcgttctacaagatgctgagcgaggccgacgcc
tgcgagctgtggatccacgagaaggagcagtggctgcacggcgtcaagatcccagagaag
ctggaggacctggaggtgatccagcacaggttcgagagtctggagcccgaggtgaacagc
caggcctcccgggtggcggtggtgaaccagatcgcccgtcagctgatccacagcggccac
cccagtgagaaggacatcaaaatccagcaggacaaactaaacaccaggtggggtcagtac
cgtgacctggtggaccagaagaaggacgccctcagctccgccctgggcatccagaactac
tacctggaatgcaacgagaccaaatcgtggatccgtgagaagaccaaggtgatcgagtcc
actcaggatctgggaaacgacctggccggcgtcatggcgctgcagcgcaagctgaccggt
atggagcgagacctcgcggcgatcgaggacaaaatggccgacctggagaaggaggccgac
cggctggccggagagcacccggcgcgggccccgggcatcaagggccacgtgggtgagatc
gaggacgtgtggaaggagatgaaggagaccctgcgcgcccgcgaggagtccctgggcgag
gccagcaagctccagaagttcctccgagagctggacgacttccaggcgtggctgtcccgc
acccagacggccgtggcgtccgaggacgtgcccaacgccctggccgaggccgagaagctc
ctggcgcagcacgagggcatcaagaacgagatcggcaactacctgaaggactaccggagg
atccgggacacgggcgaggcggtgacccggggccagaccgaggcccagtacatgttcctc
aaccagaggctgcaggcgctggacaccggctggaccgagctgcaggagatgtgggagaac
cgacgcaagctgctgtcgcagtcccacgcctaccagctcttcctccgggacgcccagcag
gccgagaccttcctcaacaaccaggagtacgtgctggctcacacggagctgccggccact
ctggaaggggccgaaggggccgtcaagaagcaggaggacttcatgaccagcgtggacgcc
aacgaggagaagatcagcggcgtggcggagtcgggccgcaggctggccgacgaggggaac
gtcagcgccgagcgcatccgggagaaagcggcgtccgtcgaccagaggcataagaagaat
cgggaggccgcccgggagctcctgaccaagctgaaggacaaccgagacctccagagcttc
ctgcaggagtgccaggagctgtctctgtggatcggcgagaagatgctaacggcgcaggac
gtgacctacgacgaggcccggaacctgcacagcaagtggctgaagcaccaggccttcatg
gccgagctgcgctccaacaaggagtggctggagaacatccacaaggcgggcacggcgctg
gtggcggagaagccggacaccgagggcgtggtgcgggacaagctggagtctctgaagaag
acgtgggacgagctggagtccagcacggagaccaaggcccagcgcctgttccacgccaac
cgggccgaactcttcacccagagctgcaccgacctggacaagtggctggcggccctggag
gagcggatccgctcggacgacttcggcaaagacctgaccagcgtcaacatcctgctgaag
aagcaccagatcctggagagccaggtggaggtgaggcagaaggaggtggaggagctgcgc
tcccaggcccaggcgctcagtcaggaggggaagggttcggacgaggtggacggcctgcgc
cgcggcgtggaggagaagttccaccatctgcaggatccgctgaagaggcgctggagtaac
ctgacggcctccaaggagatccaccagttcaaacgcgacgtggaggacgagatcctctgg
gtggaggagaggatgccgatggccacgtccactgaacacggcagtaacctacagagcgtc
cagctgctcatcaagaagaaccagacccttcagagggagatccagggtcaccagccgcgc
tacgacgacgtcttccagaagagcgctcacgtgctgaaggagggcggcggcggcggcggc
ggggaggaggtgatccgccagcgcctggacgagctgcggcggctgtggggctccgtccgg
gacgaggcggagaggaggcgcggccgcctggaggaggcgcacgaggcccagcgctactac
ttcgacgcgggcgaggccgaggcctggatgagcgagcaggagctctacatgatgtccgag
gagaaggccaaggacgagcagagctcggtggccatgctgaagaagcatcagatcctggag
caggcgctggaggactacgcccagaccgtgcaccagctctccaggaccagcagggcgctg
gtgaccgccggacatccggagagcgagcgaatcggcatgcgccagtctcaggtggataag
ctgtacgcgggtctgaaggacctggcggaggagcggagggggaagctggaagagcgggcg
cggctgttccagctgaaccgggaggtggacgacctggagcagtggatctccgagagggag
gtggtggccggctcccacgagctcggtcaggactacgaacacgtgacgatgctgcaggaa
cgcttccgggagttcgcccgggacaccaggaacaccggtcaggaacgcgtggacgcggtg
aacgggatggcggacgggctgatcgacggcgggcacgcggacgcggcggcggcggcggag
tggaaggacgggctgaacgaggcctgggcggagctgctggagctgatggacacgcgcacc
cagatcctggccgcctcctacgagctgcaccggttccaccacgacgcccgcgaggtcctg
ggccgcgtctcggacaagcgcaggaagatccccgaggagctgggacgcgaccagaacacc
gtggaggccctgcagagggcgcaccacgccttccagcacgacgtccaggcgctggggagt
caggtgaagcagctgcaggacgacgcggcgcggctgcagtcctcctacgccggggacaag
gccgaggacatccggaggcgcgaggccgaggcgctggacgcctggcgctcgctcctggag
gcgtgcgacgcccgccgcgcccgtctgctggacgccgccgacaagttccgcttcctcagc
ctggtgcgcgacctggtgctctggatggaggacgtggtgcggctcatccacgcccaggag
aagcccagggacgtttcgtcggtggagcttctcatgaacaaccaccagggcatcaaggcg
gaggtggacgcccggaacgacagcttcacctcctgcgtggacctggggaacgctctcctc
tcgaggaagcactacgcttcagaagagatcgaggagaagctgcggcagctgacggagaaa
cggaaacacatgatcgagaggtgggaggatcgctgggagtggctgcgtctggttctggag
gtgcaccagttctcccgggacgcgggcgtggccgaggcgtggctgctgggtcaggagccg
tacctgtccggtcgagaggtgggccagagcgtggacgaggtggagaagctcatcaagcgg
cacgaggccttcgagaagtcggccgccacctgggaggagcggttctcggccctggagcgg
ctcaccacgatggagctgctggaggtgagaaggcagcagcaggaggaggaggaggagagg
aggaggaggaggcaggacgccgccgccgccgccgccgcagaggaagccccgcccaccgaa
gaggtgtcgccgcagcccagggagggtgagcaggtctctcagaacggcccgccggcacag
caggaccccccccggcaggaggacgctggaggcgccgacgccgttaacggggtgccggaa
cccagtccaggttcgtccccaacggcagggcgcaagggcgaggcggcggcggcgagtcga
gcggctacgttaccgagcgaggcccgggacgcggcggcggcggctatggagggattcctc
aaccgcaaacatgagtgggaggggcacaacaagaaagcgtccaacagatcttggcacaac
gtgttctgtgtgattaagaacctggagttgggtttctacaaggacagtaagagcgccggt
cagggcgtcccgtaccacggtcaggtccctatcagcctgacggactccgcctgcgaggtg
gctctggaatacaagaagaagaaacatgtctttaagttccgagtctccgacggaaacgag
tttctgttccaggccaaagacgccgacgagatgaactcgtggatccaggcgatctcgtgt
aaaacgccctcggagaccagcgccctgtcctcccgcgcccagaccctgcccacccccagc
ggcacggccgagtccagcccgggcaaacgggagaaggacaaagagaagcgcttcagcatt
ttcaagaagaagtag
DBGET
integrated database retrieval system
