KEGG   Trichomycterus rosablanca: 134327721
Entry
134327721         CDS       T09921                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
trn  Trichomycterus rosablanca
Pathway
trn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134327721 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:trn03041]
    134327721 (sf3b4)
Spliceosome [BR:trn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    134327721 (sf3b4)
 Complex B
    134327721 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    134327721 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 134327721
NCBI-ProteinID: XP_062865314
LinkDB
Position
2:complement(414615..417354)
AA seq 389 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDLDTGNSKGFAFINFASFDASDATIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPTPILTALGHGMGIPGMPPP
GAFPPVPPPGSMPPGMPPGMPMPPVTGASQGGGGVPPPGPPPFPPAGMHPPGMPPMPMPH
AGMVPPPPGAGQAPPPPGMPPPPQMGMPPRAPFGPPMGHPMPPGMRGPPPPMPPPGYGAA
PPRPPPFGFQRPPMPPRPPAPPVRAPMPS
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatttcagagcgaaatcaagatgccacggtgtacgtggggggtctg
gatgaaaaggtctcggaacctttattatgggagctgttcctgcaggctggaccggtggtg
aacacgcacatgcccaaggacagggtgacggggcaacaccaaggttacgggtttgtggag
ttcctcagtgaagaagacgccgattacgccataaagatcatgaacatgataaagctgtac
ggtaaacccatccgcgtcaacaaggcctcggcgcacaacaagaacctggacgtgggcgcc
aacatcttcatcgggaacctggacccggagatcgacgagaagctcctgtacgacaccttc
agcgccttcggggtcatcctgcagacccccaagatcatgagggacctcgacacgggcaac
tccaagggtttcgccttcatcaacttcgccagcttcgacgcctcggacgccaccatcgag
gccatgaacgggcagtacctgtgcaaccggcccatcaccgtctcctacgccttcaagaag
gactccaagggcgagaggcacggctcggccgccgagaggctcctggccgctcagaacccg
ctctcgcaggccgaccggccccatcagctgttcgccgacgccccgcctcctcctagcgcg
cccacccccatcctgactgcgctggggcacggcatgggcattccaggcatgccccctccc
ggggccttccctccggtgcccccgccaggctccatgcctcctggaatgccccccggaatg
cccatgcccccagtcacgggtgcttctcagggtgggggcggagtcccacctcctggaccc
ccacccttccctccagctggcatgcacccaccaggaatgccgcccatgcccatgccccac
gctggaatggtgcctcctcctccaggggctggccaggcaccgccgccccctggaatgccc
cctccaccgcagatgggcatgccccctcgggcaccgttcggccccccgatgggtcacccg
atgccgccgggtatgagaggcccccctccacccatgccccctccgggttacggcgccgcg
cctccccgtcctcctccgttcggcttccagagacctcccatgcctccgcgcccccccgcg
ccacccgtccgcgccccgatgccctcgtga

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