Trichomycterus rosablanca: 134328270
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Entry
134328270 CDS
T09921
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134328270 (khsrp)
03041 Spliceosome [BR:
trn03041
]
134328270 (khsrp)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
134328270 (khsrp)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134328270 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
134328270
NCBI-ProteinID:
XP_062865418
LinkDB
All DBs
Position
15:complement(32213713..32224276)
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AA seq
675 aa
AA seq
DB search
MSDYNAVPSLGAGGAALGAGGMKKDAFADAVQRARQIAAKIGGEATGGAMSNNGGTEGFP
FAQKRSLEDGDQPDSKRLAPQSDRDNATALSIGAQLAALSQQSGHPGTVTEDYGVPDSMV
GLIIGRGGEQINKIQSESGCKVQISPDSGGLPERNVSLTGSSDSIQKAKMLLDDIISRGR
GTPPSSFHESNGSGGGSGGHMQEIIIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDPS
QGPNMDKPLRIIGDPYKVQQACEMVQEILRERDQFGERNEYGSRMGGGGGGGGGGGGGGG
GIEVCVPVPRHSVGVVIGRSGEMIKKIQSDAGVRIQFKADDGSGPDKIAHILGTPECCEH
AASIIDDLLQSIRVREEGGGPPGPPGAGMPPGERGRGRGPGGWGGPPGGGGGEMTFSLPA
HKCGLVIGRGGESVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGNPQQIEHAKQLIED
KIEGPLCPVGPGPGGPGPGGPMGPYNPNPYQPGPPGAPPHPGPPGAHQYPQGWGNTYQQW
QPPAPGDPGKAAADHSAAWAAYYAQCYQQPGAPGQTPGAQPAAAAADQSQAAPGANQPDY
TKAWEEYYKKMAQAGGGAEAPAAGGAAPSAPGAAGQTDYSAAWAEYYRQQAAYYGQNPGQ
NPAQPAPTQQGQQAQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattacaacgcggtgccgtctctcggggccggaggtgcggcgctgggagccgga
ggaatgaagaaggacgcgtttgcggacgcggtgcagcgagcccggcagatcgcggccaag
atcggcggagaagccacgggcggcgccatgagcaacaacggcggtacggaaggattcccg
ttcgcgcagaagcgctcgctggaggacggagatcagccggacagtaagaggttggcgccg
cagagtgaccgggacaacgccacggcgctgtctatcggcgctcagctggctgcgctctct
cagcagagtgggcatcccggcactgtaacggaggactacggagtaccggacagcatggtc
ggcctcatcattggccgaggaggtgaacagatcaacaagatccagtccgagtcgggctgt
aaggtccagatctccccggacagtggaggactacccgagaggaacgtgtccctgaccggc
tcgtccgactccattcagaaggccaagatgctgctggacgacatcatctcgcgggggcgg
ggcacgccgccctcctccttccacgagtccaacgggagcggcggtggcagcggcggccac
atgcaggagatcatcattcccgccggaaaggccggactcgtcatcggcaagggcggagaa
accatcaagcagctccaggaacgcgctggtgtgaagatgattctcatccaggatccgtct
caggggcccaacatggacaaaccgctgcgcatcatcggagacccttacaaagtgcagcaa
gcctgtgagatggtgcaggagatcctgagggagcgagatcagttcggagagaggaacgag
tacggctcgcgcatgggcggaggaggaggaggaggaggaggaggagggggaggaggcggc
ggcatcgaggtgtgtgtgccggtcccgcgtcactcggtgggcgtggtgattggccggagc
ggggagatgatcaaaaagatccagagcgacgccggggtgaggatacagttcaaagcagac
gacggctccgggccggacaagatcgcgcacatcctgggtacccccgaatgctgcgagcac
gccgccagcatcatcgacgacctcctgcagagcatccgcgtccgagaggagggcgggggg
cctccaggtcctccgggcgcgggcatgcctcccggcgagcgaggcaggggccgagggccc
ggcggctggggcggcccccccgggggcggcggcggcgagatgaccttctccctccccgcc
cacaagtgcggcctggtgatcgggcgcggcggcgagagcgtcaaggccatcaaccagcag
acgggcgccttcgtggagatctcgcgccagccgccgcccaacggcgaccccaacttcaag
ctcttcaccatccgggggaacccgcagcagatcgagcacgccaagcagctcatcgaggac
aagatcgaggggcctctgtgtccggtaggtccaggtccgggtgggcccggtccggggggc
ccgatgggaccctacaaccccaatccgtatcagccgggacccccaggagccccgccacac
cccggacccccaggcgcccaccagtacccccagggctggggaaacacctaccagcagtgg
cagccgcctgcgcccggcgaccccggtaaagccgcggcggaccacagcgcggcctgggcg
gcgtattacgcgcagtgctaccagcagcccggggcgcccggacagacgcccggggcccag
ccggcggccgccgccgccgaccagagccaggcggctcccggcgccaaccagcccgactac
accaaggcctgggaggagtactacaagaaaatggctcaggcaggtggtggcgccgaagct
ccggcggcgggcggcgccgctccctcggcgcccggtgcggccggacagacggactacagc
gccgcctgggcggagtactacagacagcaggcggcgtattacggccagaaccccggccag
aacccggcgcagcctgcacccacacagcagggccagcaggcgcagtga
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