Trichomycterus rosablanca: 134328276
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Entry
134328276 CDS
T09921
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134328276 (sox1b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134328276 (sox1b)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134328276
NCBI-ProteinID:
XP_062865426
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Position
15:complement(8806521..8808790)
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AA seq
336 aa
AA seq
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MYSMMMETDLHSPPQTNTSGGHTGQNAGGKLAQERVKRPMNAFMVWSRGQRRKMAQENPK
MHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKY
SLAGGLLGGSAGSGVTLGMSAVQRLDSPAGHGGSTGAASYAHVNGWANGAYTAAAAAAMM
QEAQLAYGQHASTGASHHPGHHPHHHAHHHPHHQHANPQSVHRYDMTALQYSPMSNSPSY
ASPSTYSTMPYAQHQSSVSAVAVGTLGSLVKSEPSSSPPLSGATRGPCPGDLREMISMYL
PGAEAGDAAVQSRLHALPQHYQSSAAINGTVPLTHI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatgatggagacggacttgcattccccaccccaaacaaacacgagcggg
gggcacacggggcaaaacgcagggggcaaactggcccaagagcgtgtcaagcgccctatg
aacgcgtttatggtatggtctcgcggtcagcggcgaaaaatggctcaggagaacccgaaa
atgcataactctgaaataagcaaaagactcggggctgagtggaaggtgatgtccgaggca
gagaagcggcccttcatagatgaggcgaagcgtttgcgcgccatgcacatgaaggaacat
ccggattacaagtaccggccgcgcaggaagaccaaaaccttactgaaaaaggacaagtac
tcgttggccggaggtttgctcggtggctcggctggaagcggtgtgacactggggatgagc
gcggtgcagaggttagatagccccgcgggacacggtggcagcacaggcgcagcgagttat
gcgcatgtgaacggctgggcgaacggtgcgtatacagcagcagcggccgcggctatgatg
caggaggcgcagctggcatacggtcagcatgcaagcactggggcatctcatcatcctggg
caccatccgcaccatcacgcacaccatcacccgcaccaccaacacgccaatccgcagtcc
gtgcaccgctacgacatgaccgcgctccagtacagtcccatgtcgaactctccaagctac
gcatcaccgtccacctacagcaccatgccgtacgcacagcatcaaagctccgtgtcagct
gtagcagtgggaacactgggatctctggttaaatccgagccgagctcaagcccaccattg
agcggtgcaacccgtggtccatgccccggagatctgcgcgagatgatcagcatgtattta
ccaggagcggaggctggagatgcggctgttcagagcagactgcacgcactgccgcagcac
tatcagagttcagccgctattaacggaaccgtcccactgacgcacatttaa
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