Trichomycterus rosablanca: 134328510
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Entry
134328510 CDS
T09921
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6
KO
K05477
tumor necrosis factor ligand superfamily member 14
Organism
trn
Trichomycterus rosablanca
Pathway
trn04060
Cytokine-cytokine receptor interaction
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134328510
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134328510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
trn04052
]
134328510
04090 CD molecules [BR:
trn04090
]
134328510
Cytokines and neuropeptides [BR:
trn04052
]
Cytokines
Tumor necrosis fators
134328510
CD molecules [BR:
trn04090
]
Proteins
134328510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Chordopox_A13L
Motif
Other DBs
NCBI-GeneID:
134328510
NCBI-ProteinID:
XP_062865672
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Position
15:complement(33327147..33330762)
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AA seq
270 aa
AA seq
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MTGVFVVGDSVPPGSVAPGSVPSGSVAPGSVPSGSAPSGFMPPKQKIKDTYLPYTLLGVA
LIGVVVEAVLIYVLYQRTSQTQVSPDTRTSPTMERLKGDHPDSNEIPPLPKMPDKPAAYL
HGKSPQVDAHGVMQWQSSGQFAFAHGVTYRDGGLELHTEGFYYIFSKVYFSDKCSIFSHK
VFWVSKRYNLQPHELMQSISLSCPQQTRGRDGGQRRQTNQSEPEEQENLGNSFLGGVFRL
YRGDRVFVNVSDSSLVRQGVQDNFFGVFMI
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgacgggggtgtttgtggtgggcgactctgtgccccccggctctgtggcccccggctct
gtgccctccggctctgtggcccccggctctgtgccctccggctctgcgccctccggcttc
atgccccctaaacagaaaataaaggacacgtacctgccgtacacgctgctgggtgtagcg
ctgatcggagtggttgtggaggcggtgctcatctacgtcctgtaccagcgcacttcccaa
acacaggtttctccagataccagaacgtcacctaccatggaacgtcttaaaggggatcat
cctgactctaatgagatccctccactgccgaagatgcccgacaaaccggccgcctatctg
catggtaaatccccgcaggtggatgctcacggtgtgatgcagtggcagtcgagcggccag
tttgcattcgcccacggcgtcacgtaccgcgacggcggtctggagcttcacaccgaggga
ttctactacatcttctccaaggtctacttcagcgacaagtgttccatcttcagccacaag
gtcttctgggtctcgaagcgctacaatctgcaacctcacgaactcatgcaaagcatcagc
ctcagctgcccccagcagaccaggggccgcgacgggggtcagaggaggcagacgaaccag
tcggagcccgaggaacaggagaacctgggtaacagctttctgggcggagtgttccggctg
tacaggggcgaccgggtgttcgtgaacgtcagcgatagcagcctggtacgtcagggggtg
caggacaacttcttcggcgtcttcatgatttag
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