KEGG   Trichomycterus rosablanca: 134328531
Entry
134328531         CDS       T09921                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
trn  Trichomycterus rosablanca
Pathway
trn03420  Nucleotide excision repair
trn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134328531 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134328531 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trn04121]
    134328531 (cul4a)
   03400 DNA repair and recombination proteins [BR:trn03400]
    134328531 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:trn04147]
    134328531 (cul4a)
Ubiquitin system [BR:trn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     134328531 (cul4a)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      134328531 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      134328531 (cul4a)
Exosome [BR:trn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   134328531 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 134328531
NCBI-ProteinID: XP_062865696
LinkDB
Position
15:complement(4277472..4296565)
AA seq 757 aa
MMADENKLSKSSNFSAFAENSNGLTKAPNSVTSKSGASKKLVIKNFKDRPKLTETYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPMLYKQLRQVCEDHVRAQIQLFR
EDSLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDSAVQSRTVEGILEQIEKERNGETVDRSLLRSLLGMLSDLQVYKESLEHRFLMETDRL
YAAEGQRLMLERDVPEYLHHVAKRLEEENDRVISYLDQSTQKPLISVVEKQLLGEHLTAI
LHKGLSTLLDENRVTELTLLYQLFSKVKGGLPALLQFWREYIKSFGAEIVSSPEKDKDMV
QELLDFKDKMDNVAQNCFQRNETFINAMKEAFESFINTRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQSDPSNIDLTVNILTMGYWPTYTPMEVH
LPPEMVKLQEVFKMFYLGKHSGRKLQWQATLGHSVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFTLEEIQTATGIETSELRRTLQSLACGKARVLNKNPKGKDVEDGDRFNFNSDFKH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLLSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKENPNQYHYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgatggctgatgaaaacaaactgagcaagagctcaaacttctctgcttttgcagaaaac
agtaacggcttgacaaaagccccgaattcagtgacttcaaaaagtggtgcatcaaaaaaa
ctggtaatcaagaatttcaaagacagacccaagctgacagaaacctacacagaggacacg
tggctgaagttgcgcgatgctgtcggtgctatacagaacagtacttcaatcaaatacaac
ctggaggagctctatcaggcagtggagaatctttgctcctacaaagtttctcccatgtta
tacaagcaactccggcaagtttgtgaagatcatgtacgggcacaaatccaactctttaga
gaagactctctggacagcctgtcgttcctaaagagaatgaacagatgctggcaggatcac
tgcagacaaacgattatgatccgtagcatatttctctttctggatcgtacatatgtccta
cagaactccctgcttccctctatctgggacacgggattggaactgtttcggacacacatc
gtgagcgacagtgcggtccagagtcgtacggtagaggggattctggagcagattgaaaaa
gaaagaaatggcgagactgtggaccgtagtctcctgcgcagcttactgggcatgctgtca
gatttacaggtgtataaggaatcacttgagcacaggttcctaatggagacggatcgattg
tatgcagcagagggtcaaagactgatgctggagagagacgtgcctgaatacctgcatcat
gtagcgaagcgactagaggaggagaacgatcgtgtcatcagctacctggatcagagcact
cagaagccgctgatctctgttgtagagaagcaacttctcggagaacatttgacagccatt
ttgcataaaggtctaagcacgctgttagatgagaatcgtgtaacagagttgaccctgctg
tatcagctctttagtaaagttaagggagggctgcctgcgttattacagttctggagggaa
tacatcaagagctttggagccgagatcgtgagctctccagagaaagataaggacatggtg
caggagctgctggactttaaggataagatggacaacgtagcacaaaactgtttccagagg
aacgagaccttcattaatgccatgaaagaggccttcgagagcttcattaacacaagacct
aacaaaccagctgagctgattgccaagtacgtggactctaaacttcgtgctggtaacaaa
gaagccacagaagaggagctggaaagaatcctggacaaaatcatgatcatcttccgcttc
attcatggaaaggacgtgttcgaagcgttctataagaaggatttagccaagcgcttgttg
gtgggcaaaagtgcctctgtggacgctgagaaatcaatgctgtccaaactcaagcacgag
tgtggtgcagcgttcaccagcaagcttgagggcatgttcaaagacatggagctctccaaa
gacatcatgatccagtttaaacagtacatgcagaatcagagtgaccccagcaacattgat
ctgaccgtcaacatcctcactatgggttactggcccacctatacccccatggaggtccat
cttccccctgagatggtgaagctgcaggaggtgtttaaaatgttctatctgggcaagcac
agtggacgaaagcttcagtggcaggccaccctgggtcactctgtgcttaaagcagagttc
aaggagggtaaaaaggagctgcaggtgtctttattccagactctggtcttactcatgttt
aacgagggcgaggagttcacattagaggagatccaaaccgctactggaatagagacgagc
gagctgagacgcacgctgcagtccctggcctgtggcaaggcgcgtgtgcttaacaaaaat
cccaaagggaaggacgtggaggacggagatcgtttcaacttcaacagcgacttcaaacat
aaactgtttcgcatcaaaatcaaccagatccaaatgaaagagacggtggaggagcaggtc
agcactacagagcgggtgttccaggacaggcagtaccagatagacgctgccgtggtgaga
atcatgaagatgaggaagactctcagccacaatctgctcctgtcagaactctacaaccag
ctcaagtttcctgtcaagccaggtgacttgaagaagcgcatcgagtccctcatcgacaga
gactacatggagcgagacaaggaaaatcccaaccagtatcactatgtcgcctga

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