Trichomycterus rosablanca: 134328539
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Entry
134328539 CDS
T09921
Symbol
trim2b
Name
(RefSeq) tripartite motif-containing protein 2
KO
K11997
tripartite motif-containing protein 2/3
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134328539 (trim2b)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134328539 (trim2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
TEN_NHL
AlgP_helical
zf-B_box_ZFPL1
Beta-prop_IFT122_1st
ANCHR-like_BBOX
Mala_s_1-like
CRLF3_N
CTXL_M
CoV_S2
CorA
Motif
Other DBs
NCBI-GeneID:
134328539
NCBI-ProteinID:
XP_062865705
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All DBs
Position
15:14616166..14645183
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AA seq
668 aa
AA seq
DB search
MEAQQGSPDSSSEECTVLEAPPGKETEVVCAQHKGRSPALYCLECERAVCDECMLGEHED
HRTDSLEKIVDQQRAALQEGLTAAKNRLPQIRDTVQSLRDVLQQLSTQRNSIEENIHSSF
SDLHKTLDTRKSVLLMELEVTFGMKQKVLQNQLDTLLKEEAAINSNCNLTGEALNGASEA
FVLQTHKDFGERLSEMASEGLPLQPEENNQLELAMEMEGLRNSIHNLGAIITTNAVASHT
EASGEGLEQCFVGQPTSLIITTRDKSGGLCKTGNAVISWEVSTPDGNAVDGEILDHKNGI
YEFLYTVHKEGDLSLGLRLYDQHIKGSPFQLKVASSPDDSPTTTSGANAASTGSSDGGAR
RRSAKSPGSRSRQKGVRRGGSLFSTPKKKVNPIEDDLIFKIGTKGRNKGEFTNLQGVAAS
SGSILIADSNNQCVQIFSNEGEFQSRFGVRGRSPGQLQRPTGVAVHPNGDIIIADYDNKW
VSIFSSDGKYKAKLGSGRLMGPKGVSVDQNGHVIVVDNKACMVFIFQPSGKLVTKFGSRG
IGDKQFAGPHFAAVNNNNEIIVTDFHNHSVKVFSAEGEFLLKFGSNGEGNGQFNAPTGVA
VDVNGNIIVADWGNSRIQVFDGNGSFLSYINTAADPLYGPQGLALTSDGHVVVADSGNHC
FKVYRYLQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacagcagggttctccggacagcagcagtgaggaatgtactgtactggaggct
ccgcccggcaaggaaacagaagtggtttgtgctcaacataaaggaagatctcctgcattg
tattgtttggaatgtgagagggctgtgtgcgacgagtgcatgttgggagaacacgaggac
caccgtaccgattctttggaaaaaattgtggatcaacagcgagcagctttgcaagaagga
ctgactgcagctaagaacaggcttccccaaataagagacaccgtccagtcactgagggac
gtcctgcaacagctgagcactcagaggaactctatagaagagaacattcactcatccttc
agcgatttgcacaagaccctcgacacccgcaagagcgtcctactcatggagttagaggtc
acctttggaatgaagcagaaggtactgcagaaccagttagacactctacttaaagaggag
gcagcaatcaacagtaactgcaacctaacaggagaggccctgaacggagccagcgaggcc
tttgttctgcaaacccacaaagattttggagagcgactgagcgagatggccagtgagggt
ctcccccttcaacccgaggagaacaatcaactggagctcgcgatggagatggaaggactt
cgaaattccatccacaacctgggcgccattatcaccacaaacgcagttgccagccacacc
gaggcctccggggagggtctggagcaatgcttcgtgggccagccgacctccctcatcata
accaccagagacaagtcagggggcctgtgtaagacgggcaatgctgtcatctcgtgggag
gtctccacacctgatggaaatgccgtggatggagagatcctggaccacaagaatggcatc
tacgagtttctgtacacagtgcacaaggaaggggacttgagtctgggtttaagactttac
gaccagcacattaaaggaagcccctttcaattaaaggtggccagttctccagacgactct
cctacgaccacgtcaggagccaatgccgcgtcaacgggctccagcgatggcggtgcgagg
aggcggagtgccaagtccccaggcagccggagccgacagaagggagtgaggcgaggtgga
agcttgttcagcacccccaagaagaaagtgaatccaattgaagatgatctcatttttaaa
attggaactaaggggagaaacaaaggagagtttaccaatctacaaggtgtagccgcctca
tccggaagcatcctgattgcggacagtaataatcagtgtgtgcagatcttttccaatgag
ggagagtttcagagccgatttggagttcgcggccggtcgccgggccagctgcagcggccc
actggtgttgccgtgcatcccaatggtgacatcatcatcgctgactatgataacaagtgg
gttagcatcttctccagtgatggtaaatacaaggctaaactgggctctggaaggctgatg
ggtccaaagggcgtgtcagtggatcagaatggtcatgttatcgttgtggataataaggct
tgcatggtgttcatcttccagcccagtggaaaacttgtgacaaagtttggcagcagaggc
atcggtgataagcagtttgcaggtccacactttgcagcagtcaacaataataatgaaatt
attgtaacagactttcacaatcactcagtaaaggtgtttagtgctgagggagagtttctg
ctcaagtttggctcaaacggtgagggaaatggccagtttaatgctcccacaggagttgca
gtggatgttaatggtaacatcatcgtcgctgactggggaaatagccggatacaggtattt
gatggcaatggttcctttctgtcctacatcaacacggcggccgatcctctgtatgggccg
cagggtctcgccctgacctcggatggccacgtggttgtggctgactctggtaatcactgt
tttaaggtgtaccgttaccttcagtga
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