Trichomycterus rosablanca: 134328555
Help
Entry
134328555 CDS
T09921
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134328555 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134328555 (nup133)
03036 Chromosome and associated proteins [BR:
trn03036
]
134328555 (nup133)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134328555 (nup133)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134328555 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
134328555
NCBI-ProteinID:
XP_062865728
LinkDB
All DBs
Position
15:31650936..31678576
Genome browser
AA seq
1163 aa
AA seq
DB search
MFTPRGASGSARRHTARTGGRKSVSTPSGLLFSPRRAPLTPSRATPTRVQSCGAVDSCHY
DVQPFGSSLPVKVMEVLTTAEADEQISVKVDRSGWAWLVCGERLIIWKISQTPVAKLSVC
KDLQLAPSDYAYTADLIAVNSSSPLESASVQCVCVMAASPDGPVRFWPSLAHEGTYVETP
ADPGGHPRDHVAAVRGGSFIVSSYRGHLLRAGPDGSGRLYQRPVQQGHGVLSGIGRRVSS
LFGLRNPPADATVHGVLYAPHSGALYTLGTCGLNKWEVGDATEVQVLSWNACPVLADSIS
DAIWGSESNYGEIKEGVNVAYLDMQLSHAGLVVLAAAWHPADTPCLAYFCLVTIPDAVGP
ATEELPVEVTRYNPPFQTEDELHKTRMVLPSETGPAAYLYNEELVYACTTGAGRSGLPEE
KLSFNFPSDRIHGAGVCADWPLFFSRLNGLVAVVARESASILPETVEDSLCTSVAGAGPE
GTPPKLERVADEDKTKQLKRAFLQFCRNDRVGAQNMADRLFPHDAEEGREGAELDGVVAR
IDLDLVDDYPASDPRWAESVPDESAGFTLTSLILLHQLEDKMKAHHCFMDFLLQISNQNE
PRVQRRAVKTEPQSCCRSASPKTGLLDHLSSTAVRSSPMATRLLLCEHAEKLSAAFTLKN
HHAKQPELVNAAITATLKKNGTPLPASLSPADVFFREVSQISSILESLLDEEEKCLKENP
AASVQWAEVVLDVNGIIKDMLQAAVQYRETKASLYRPAENAPAEPEYVPWTASGGVRTAI
SRQHELILHAVYPQADSGLRGALSEQLVALLDSLFGGYVAQLASLRRPGQRERRDALEME
YTRRRAELLTPLLELGQHQWAAALAEKYCDFDVLVRICERTDDPGRLQHYMSKFAHQNFA
DFLFRWYMEKGKRGKLLSQPVAQHEQLTSFLQAHQHLSWLHHIHVQDFQSAHHTLYSQAN
AEQRYFSKKKTLLALSKLTALASSMPEALQHKQVNDIVEQERFLLHQETLPKQLLEEKQQ
NPEIMPVLGARNLIELYICDENRGANEYDFKKALDLLQYVDKVEDDAVDIDALKRLVFSK
ALKKDWKENWSASDGSDDPLEAAKDSIFVKILQKLVQEGVPLQSYLPDVKDLLQMDELDF
LRSKSFFEFLLRANYEHYVQSQI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccccccggggagcttcgggctcggcacgccgccacacagcgaggaccggcggc
aggaagagtgtgagcacgccgtcagggctgctgttctccccgcgcagagctccactcact
cccagccgagcgacgcccacgcgggtccagagctgcggcgccgtggactcgtgccactac
gacgtgcagccgttcggatcgtccctgccggtcaaggtgatggaggtcctgaccacggcc
gaggcggacgagcagatctctgtgaaggtggaccggtcaggctgggcgtggctggtgtgt
ggggagaggctgatcatctggaaaatctctcagactccggtagcaaagctgtcggtgtgt
aaggacctgcagttggcccccagcgactacgcgtacaccgccgacctgatcgccgtcaac
tcctcgtcccctctggagtcggcttccgtccagtgcgtgtgcgtgatggccgcgtccccg
gacggcccggtccggttctggcccagcctggcccacgaggggacgtacgtcgagacgccc
gccgacccgggaggacacccgcgcgaccacgtggctgcggtcaggggaggctccttcatc
gtgtcgtcgtaccgcgggcacctcctgcgggcgggcccggacggatccgggcggctctac
cagcgaccggtgcagcagggacacggcgtgctgtcgggcatcgggcgccgcgtctccagc
ctgttcgggctccgcaaccccccggccgacgccaccgtgcacggcgtgctctacgcgccg
cactcgggcgccctgtacacgctcggcacgtgcgggctgaataagtgggaggtcggggac
gccacggaggttcaggtgctgagctggaacgcctgtcccgtcctcgccgacagcatctcc
gacgccatctggggctctgagagtaactacggcgagatcaaggagggcgtgaacgtggct
tatctggacatgcagctcagccacgccggtctggtggtgctggccgcggcgtggcacccc
gccgacaccccgtgtctggcgtatttctgcttggtcaccatcccggacgccgtaggaccc
gccacggaggaactccccgtggaggtgaccagatataacccgcccttccagaccgaggac
gagctccacaagaccaggatggtgttgccgtcggagaccggcccggccgcgtatctctac
aacgaggagctggtgtacgcctgcaccaccggcgccgggcgctccgggctgcccgaagag
aagctcagcttcaactttcccagcgaccgcatccacggcgccggcgtgtgcgccgactgg
ccgctcttcttctcccggctcaacggcctggtcgccgtggtagccagagagagcgcctcc
atcctcccggagaccgtggaggattcgctctgtacctcggtggccggagccggaccggag
gggacgccccccaaactggagcgagtagcagacgaggacaaaaccaagcagctcaagcga
gctttcctacagttctgcaggaacgaccgcgtcggcgcccagaacatggccgaccggctg
ttcccgcacgacgcggaggaaggccgggagggggccgagctggacggcgtggtcgctcgg
atcgacctggacctggtggacgattaccccgcctccgacccgcgctgggccgagtccgtc
cccgacgagagcgccggcttcacgctgacctccctgattctcctgcaccagctggaggat
aaaatgaaagcgcatcactgcttcatggacttcctgctgcagatatccaatcagaacgag
cctcgagtgcagcggcgagcagtaaaaaccgagcctcaaagctgctgtagatctgcatct
cctaagacggggctcctggaccacctcagctccacggcggtgcgctcgtctcccatggcg
acgcgcctgctgctgtgcgagcacgcggagaagctctcggccgccttcacgctgaagaac
caccacgccaagcagcccgagctggtcaacgccgccataacggccacgctgaagaagaac
ggcacgccgttgccggccagcctcagtccggccgacgtcttcttcagagaggtgtctcag
atctcctccatcttggagtcgctgctggacgaggaggagaagtgtctgaaggagaacccc
gccgcctcggtgcagtgggccgaggtcgtgctcgacgtcaacggcatcatcaaggacatg
cttcaagcagcggtgcagtacagagagaccaaagcgtccctctacagaccggcggagaac
gcccctgcggagccggagtacgtcccgtggacagcgtccggcggcgtgcgcaccgccatc
agccggcagcacgagctcatcctgcacgccgtgtacccccaggccgactccggcctccgc
ggcgccctgagcgagcagctggtggcgctcctggactccctgttcggcggctacgtggcc
cagctggcctcgctgcgccggcccggccagcgggagcgccgcgacgcgctggagatggag
tacacgcggcgccgcgccgagctcctgacgccgctactggagctggggcagcaccagtgg
gcggcggcgctggccgagaagtactgcgacttcgacgtgctggtgcggatctgcgagcgg
accgacgacccgggacgcctgcagcactacatgagcaagttcgcccaccagaacttcgcg
gacttcctgttccgatggtacatggagaagggcaagagagggaagctgctgtcccagccc
gtcgcccagcacgagcagctcaccagcttcctgcaggcgcaccagcacctcagctggctc
catcacatccacgtgcaggacttccagagcgctcaccacaccctgtacagccaggctaac
gccgagcagcgctacttcagcaagaagaaaactctactggcgctcagtaagctgaccgct
ctggcctccagcatgcccgaagctctgcagcacaagcaggtcaacgatatcgtggaacag
gagcgttttctgctccatcaggagactctacccaaacagctgctggaggagaagcagcag
aacccggagatcatgcctgtactgggcgctcgcaaccttatcgagctgtatatctgtgac
gagaaccgcggggccaacgagtacgacttcaagaaagccctggacctgctgcagtacgtg
gacaaggtagaggacgacgccgtcgatatcgacgccctcaagaggctcgttttcagcaaa
gccctgaagaaagactggaaggagaactggtcagcgtcagacggcagcgatgatcccctg
gaggcagcgaaggacagcatcttcgttaagattcttcagaagctcgtccaagaaggcgtt
cctctccagtcctacctgcctgacgtgaaggacctgctgcagatggatgagctggacttc
ctcagatccaaatcgttcttcgagttcctgctgagagcgaactacgagcactacgtccag
tctcagatctga
DBGET
integrated database retrieval system
