Trichomycterus rosablanca: 134328575
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Entry
134328575 CDS
T09921
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134328575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134328575
03021 Transcription machinery [BR:
trn03021
]
134328575
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134328575
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
134328575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134328575
NCBI-ProteinID:
XP_062865763
LinkDB
All DBs
Position
15:complement(4401346..4427193)
Genome browser
AA seq
647 aa
AA seq
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MADRGSASQEERPRADSTSSQTERKPAMENGMHVQIAEMNRTDLQQKLNGQASAISNMQA
QALLQQLNLSPVQQQQFFLQQAQQLLAAAVHQQSVGQQSSTTGANISASAATPITQIPIS
QPIQIASQLQPAGLNLQQFVLVQPGQLQSAQFILSPSPQGQTGLLQAQNLLTQLPQSQAH
VLQSLPSIALTTQAAIPTRKIAAMPAPAPVTPKRSDFPPSEEAHELEELEQFAKTFKQRR
IKLGFTQGDVGLAMGKLHGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENMTSD
STGSSPGDLSPGLCEGLNRRRKKRTSIDTNIRIALEKSFLEQSHKPTSEEITLIADQLNM
EKEVVRVWFCNRRQKEKRINPPSSVSSTPIKTIFSNSTPGVSSASNTLTVNSALALNAAS
VPSLALTGATLGPVTSNTATVISLAPAVATPATAVMSPSLLSAATTVTSSKQDLVSSSES
GHAVATSTAHGTGQLVVTPTGLGGANLAAMAAVAGLNPGIISPSQLTQGGALLSLAPAAL
GNALTPTALMSNTALATFQALTSGGALPITSIDGSNMLFANTGAGGSVSSLMTTPLIFNT
SGLSLFPTSMLAAGGAGGGALNLQVTGDAALSAMASIKSITVASKAQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaggatcagcgagtcaagaagagcgaccgagagcagattctacaagctct
caaacagaacgtaaacctgccatggagaacggaatgcacgtccaaattgctgaaatgaac
aggacggacttgcagcagaagctaaacggacaagcaagtgcaatcagcaacatgcaggct
caagccttgcttcagcagttgaatctgagtccagtgcagcagcagcagttcttcttgcag
caggctcaacagctcctggccgccgccgtgcatcagcagtcagtgggtcagcagagcagc
accaccggcgccaacatctctgcttctgctgctacacccattacccagatacccatctca
cagcccatccagatcgcatcacagttgcagcccgctggccttaacctgcagcagtttgtg
ttggtgcagcctggacagcttcagtctgcgcagttcatcctctccccttcacctcaaggc
cagactggccttcttcaagcccagaatcttttgacacaactacctcaaagtcaagcccat
gtcctgcagtctctgccaagcattgctctcactacacaggcggcaatacctacacggaag
atagctgccatgccagctccggccccggtcacacccaagcggtcggattttcctccgtct
gaggaagctcatgaactggaggagctggagcagtttgccaagacctttaaacagaggaga
attaaactgggctttactcagggagacgtgggcttggccatgggaaagcttcacggcaac
gacttcagccagaccaccatctctcgctttgaggccttgaacctgagcttcaaaaacatg
tgcaagctcaaacccttgctggagaagtggcttaatgatgctgagaacatgacctcggac
tccacaggttccagtcccggtgacctgtcccctggcctgtgcgaaggcctgaaccgccgc
cgcaagaaaagaaccagcatcgacaccaacattcgcatcgcgctggaaaagagcttcctg
gagcaaagccataagccgacctccgaagagatcacgctcatcgctgatcagctcaacatg
gagaaagaggtggtgagggtttggttctgtaaccgacggcagaaagaaaagaggatcaac
cctcccagcagcgtctccagcacgcccatcaaaaccatcttttccaactcgactccaggg
gtgtccagcgcatccaacactctgacggtcaactcggcgctcgctctaaatgctgcctcc
gttcccagcctcgcactcactggtgcaactctaggaccagtcacatcgaacaccgccacc
gtcatctctctggcgcctgctgttgccactccagccacggccgtgatgtcgccgtctctt
ttatcggctgccaccactgtgaccagctcgaagcaggatctggtctcctcaagcgaaagc
ggtcacgctgtagcgacatcgaccgcacatggaacggggcagctcgtggtgactccgacc
ggactgggaggagccaacctggcagccatggcagcagtggcaggactgaacccagggatc
atttcgccttcacagctaactcaggggggcgcgctgctcagtttggccccggcggctctc
ggtaacgctctgactcccacagcgctgatgagcaacaccgcactggctacgtttcaggct
ctgacctcgggaggggcgttacccataacctccatcgacggaagcaacatgctgttcgcc
aacactggcgccggaggttcggtgtccagcctgatgaccactcctcttattttcaacacc
tcaggtctgtcactgttccccaccagcatgcttgcggccggaggagccgggggcggagct
ctcaacctacaggtgaccggcgacgcggcgctgagcgccatggcttcgatcaaaagcatt
acggtggcctccaaggctcaataa
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integrated database retrieval system
