Trichomycterus rosablanca: 134328591
Help
Entry
134328591 CDS
T09921
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134328591 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134328591 (mid1)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134328591 (mid1)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134328591 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
PRY
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
134328591
NCBI-ProteinID:
XP_062865787
LinkDB
All DBs
Position
15:complement(5259839..5273834)
Genome browser
AA seq
675 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCARRILVSHCTSGEPAETICAFQCPTCR
YAISLSPQRGLDALKRNVTLQNIIDRVQRASTSATLLLPASGHSSPGDCQGAMTATAPSS
PTDMVQCQFCEQEPPQCAVKTCVTCEVSYCEECLRATHPNKKPFTGHRLIEPLPDSHLRG
LQCLEHEEEKVNMYCLTDDQLICSLCKLVGRHRDHQVAALSERYEKLKQMLDSNLSHLIK
RSNELESLMAKLIQTCQHVEVNASRQEGKLMEECDLLINIIQERRQIISAKIKEGKTVRL
RKLAQQIANCKQCIERSSALITQADQTLKESDHARFLQTAKSISERVSMATASSQVLIPE
INLTDTFDTFALDFTREKKMLETLDYLTAPSPSGIREELCTASYDTVTVHWTSDDEFSVV
SYELQYTIFTGQSNIISLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSR
NSEPGTLKTNSQPFKLDPKSAHRKLKLSHDNLTVERDEISSKRSHGQDRFSSQSSYGVIG
NVYIDSGRHYWEALIGGSTWYAVGIAYKAAPKHEWIGKNPFSWVLCRCNNSWMVRHNSKE
MTIDPSPHLRRVGVLLDYDAGSLAFYDAVSSQHLHTFHMTFSQPVCPVFNIWNKCLTVLT
GLPIPDHLEGVDSLD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctggagtcggagctgacgtgcccgatctgcctggagctgtttgaggaccct
ctgctgctgccctgcgctcacagcctgtgcttcaattgtgcccgccgcatcctggtctct
cactgcacctcaggtgagccggctgagaccatctgcgccttccagtgtcccacttgtcgc
tatgccatctcactgagtcctcagcgtggcctggatgccctcaagcgcaacgtgaccctc
cagaacatcatcgaccgtgtccaaagggcttcaacttcggccacccttcttctccccgcc
agcggacacagctcgccaggcgactgtcagggcgccatgaccgccactgccccctcttcg
cccaccgacatggtacagtgtcagttttgtgagcaggagccgccacagtgtgccgtaaag
acttgtgttacctgtgaggtttcatactgcgaggaatgcctgcgtgctacccacccaaac
aaaaagccgttcaccggacatcgtctcatcgagcctttgcccgactcgcaccttcgaggg
ctgcagtgcctggagcacgaggaggagaaggtgaacatgtactgtcttacggacgatcag
ctcatttgctctctctgcaagctggtaggacgtcaccgcgatcaccaagtggcggcactg
agcgagcgctacgagaaactaaagcaaatgttggactcaaatctcagccatttgattaag
aggagcaatgagctggagtcactgatggcaaaactgattcagacgtgtcagcatgtggag
gtaaatgcatcccgacaggagggtaaactgatggaggagtgtgacctcctgatcaacata
attcaggagaggagacagattattagtgccaaaataaaagagggaaaaactgtccggttg
cgcaaactagcacaacaaattgccaactgcaagcagtgcatagaacgatcctctgctctc
ataacacaagcggaccagacgctaaaagaaagcgaccatgcacgcttcctccagactgcc
aaaagcatttcagagcgagtctcgatggccacagcatcctctcaggtcctgataccagag
attaatctgacggacacgttcgacaccttcgccctggactttaccagagagaagaagatg
ctagaaactctggattacctgacagcaccaagtccttcaggtatacgagaagagctttgc
acagcctcctatgacactgtaactgttcactggacatctgatgatgagttctcagtggtt
tcatatgagctgcagtacaccatcttcactggccagtccaatattatcagtctttgcaac
tcagctgatagctggatgattgtgcccaacatcaagcagaaccactacaccgttcacggc
ctgcaaagtggcaccaaatacatctttattgttaaggccattaatcaggcaggaagtcgc
aacagtgaacctggaacgctgaagaccaacagtcagccatttaaacttgacccaaagtct
gctcacaggaagctaaaactatctcatgacaatctgaccgtggagcgagacgagatatcg
tcaaaaaggagccacggccaggaccgtttcagcagccagagcagctatggtgtcataggg
aacgtgtacatcgacagcggccgccattattgggaagctctcattggtggaagcacttgg
tatgcagtaggcatagcctacaaagctgcacccaagcacgaatggattggaaagaacccg
ttctcatgggtgctctgtcgctgcaacaactcctggatggtgcgccataacagcaaagaa
atgaccatcgatccttcaccgcatctgaggcgtgtcggcgtgcttctggactacgatgcc
ggctcactggctttttacgatgccgttagctctcagcatcttcacaccttccacatgacc
ttcagccagcctgtctgccctgtatttaatatatggaataaatgtctcacagttcttact
ggccttccaattccagaccatctggagggtgtggactctcttgactga
DBGET
integrated database retrieval system
