Trichomycterus rosablanca: 134328652
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Entry
134328652 CDS
T09921
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
trn03013
Nucleocytoplasmic transport
trn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134328652 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
134328652 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134328652 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134328652 (xpo1a)
03009 Ribosome biogenesis [BR:
trn03009
]
134328652 (xpo1a)
03016 Transfer RNA biogenesis [BR:
trn03016
]
134328652 (xpo1a)
03036 Chromosome and associated proteins [BR:
trn03036
]
134328652 (xpo1a)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
134328652 (xpo1a)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134328652 (xpo1a)
Pre-60S particles
134328652 (xpo1a)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
134328652 (xpo1a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134328652 (xpo1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
OS-C_C
Motif
Other DBs
NCBI-GeneID:
134328652
NCBI-ProteinID:
XP_062865876
LinkDB
All DBs
Position
15:3646908..3675624
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILESVIKTRWKILPRNQCDGIKKYVVGLIIKTSSDANVV
EKEAVYLSKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFSLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITPEIPKIFDAVFECTLNMINKDFEE
FPEHRTNFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTM
LQNVAQEEAAAQSFYQTFFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV
TLNAGTPVNNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagatatgacaatgttagcggaccacacagcccggcagctgctggacttctct
cagaaactagacatcaacctgctggacaatgtggtcaactccatgtactatgatgttgga
tcccagcaacggctggcacaggaagtccttaccaacttaaaagatcacccggacgcatgg
accagagtggacaccatcctggagttctcgcagaacatgaagaccaaatattacgccctt
cagattctggagtccgtcattaagacacgctggaaaattcttccaaggaaccaatgtgac
ggaataaagaaatatgttgttggactgattatcaagacgtcatctgatgctaacgttgtt
gagaaagaggcagtttacctgtcaaaactcaacatgatcttggtgcagattctgaagcag
gagtggccgaagcactggcccacgttcatcagcgacatagtgggagcgagccgtacgagc
gagagcctgtgccagaacaacatgatcatcctgaagcttctcagcgaagaggtgttcgac
ttctccagcggacagatgactcaagtcaaagccaagcacctgaaggacagcatgtgtaac
gaattctcccagatttttcagctttgccagtttgtcatggaaaattcccagaatgctccc
ctggtccaagccacgctggaaaccctcctgcgcttcctgaactggattcctctgggctac
atttttgagaccaaactcatcagcaccctggtgtacaagttcctgaacgttccgatgttc
cgtaacgtgaccttgaaatgtctgacggagatcgcaggcgtgagcgtcaaccagtacgag
gaacagtttgtgaacctcttctctctcaccatgatgcagctcaaacagatgctgcccctg
aacacgaacatccgcctggcgtacgcgaacggcaaagacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagagcacggccagctgatcgagaaaagg
cccaacctgcgggaaaccctgatggaggctctccactacatgctgctggtgtctgaggtg
gaggagaccgagatcttcaagatctgtctggaatactggaaccacctggcagccgaactg
tacagggagagtccgttcagcacctccacgtcacccctgctctccgggagtcagcacttc
gacgtgcccccgcgcaggcacctctatctccctgtcctctcaaaggtgcgtctgctcatg
gtgagccgcatggccaaaccggaggaggtgctggtggtggagaacgatcagggtgaagtg
gtgagggagttcatgaaggacaccgactccataaacctctacaagaacatgagggagact
cttgtgtacctgacccatttggactacgccgatacggagaggatcatgactgaaaagctg
cacaaccaggttaacggaaccgagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccatcagtggagccatgcacgaggaggacgagaagagattcctagtcacggtc
atcaaggatctgctgggtctgtgtgagcagaagagaggaaaagacaacaaggccatcatt
gcttccaacatcatgtacatcgtaggccagtaccctcggttcctccgcgctcactggaag
ttcctcaagacggtggtcaacaaactcttcgaattcatgcacgagacgcacgacggcgtg
caggacatggcgtgcgacacgttcatcaagatcgcgcagaagtgcaggaggcattttgtg
caggtgcaggtcggcgaggtcatgcccttcatcgacgaaatcctgaacaacatcaacacc
atcatctgcgacctgcagccgcagcaggttcacacgttctacgaggctgtaggttacatg
atcggcgctcagacagaccaggcagtgcaggagcatctgattgagaaatacatgctgcta
cccaaccaggtgtgggacagcataattcagcaggccaccaagaacgtggacatcctgaag
gacgcggagacggtgcgccagctgggcagcatcttgaagaccaacgtgagggcgtgtaag
gctgtcggccacccgttcgtggtgcagttagggcgtatttatttggacatgcttaacgtc
tacaagtgcctgagtgaaaacatctcctccgccatccaggccaacggcgagatggtgacg
aagcagcctctgattaggagcatgcgcaccgtgaagagagaaactctgaagctcatctct
ggttgggtcagtcgttccaacgatccacaaatggttggggagaactttgttcctcctctg
ctggaggccgtcctgatcgactatcagcggaacgtacccgccgctcgagaacccgaagtg
ctcagcaccatggccaccatcgtcaataagctcggagcccacatcacgccggagataccc
aagatcttcgacgccgtcttcgagtgcaccctgaacatgatcaacaaggatttcgaggag
ttccccgagcacaggacaaacttcttctacctgctgcaggcggtgaactcgcagtgcttt
cctgccttcctttccatcccaccagcccagttcaagctggtactggattccataatctgg
gcctttaaacacacgatgaggaacgtagccgacacgggtctgcagatcctgttcaccatg
ctgcagaacgtggctcaggaggaggccgccgctcagagcttctaccagacgttcttctgc
gacatcctgcagcacatcttctccgtcgtcactgatacctcccacacggctggtttgacg
atgcacgcctccatcctggcctacatgttcaacctggtcgaggaaggaaaaatcagtgta
accctgaacgccggcacccccgtcaacaaccaggtctacgtacaggaatacgtagccaac
ctgctcaagacggccttccctcacttacaagatgcgcaggtgaaggtgtttgtaactggt
ctgttcagcttgaatcaggacattcctgccttcaaggagcaccttcgggatttcctagtg
cagataaaggagtttgcgggcgaagacaccaccgacctgttcctggaggagcgcgaggca
tctctgcgtcaggctcaggaggaaaagcacaaactgcagatgtctgtgccgggaatcctg
aaccctcacgaactccccgaggaaatgtgtgactga
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