Trichomycterus rosablanca: 134328689
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Entry
134328689 CDS
T09921
Symbol
jag1a
Name
(RefSeq) protein jagged-1a isoform X1
KO
K06052
jagged-1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04330
Notch signaling pathway
trn04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134328689 (jag1a)
04371 Apelin signaling pathway
134328689 (jag1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
trn04090
]
134328689 (jag1a)
CD molecules [BR:
trn04090
]
Proteins
134328689 (jag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
MNNL
JAG1
DSL
EGF_2
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
DUF6479
DUF7269
Motif
Other DBs
NCBI-GeneID:
134328689
NCBI-ProteinID:
XP_062865930
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All DBs
Position
15:complement(31421820..31479369)
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AA seq
1212 aa
AA seq
DB search
MRTHGPGLTAACLQLLVHCVYIQLCAASGHFELRVVPTRNANGEPQAAPCCGGTRSPSES
DRCARSECHTYFRICLKEYQSRVTPGGSCSFGSGTTPVIAGNTAASKSLAENDKAHVVLP
FSFAWPRSYTLVVEALDFNNDSSGGGGSGQVIEKTVQSGMINPGPQWQTLKRSGAVVQYD
FQVRVTCDEHYYGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWASPECGKAICRQGCSP
NHGSCKSPGECRCLYGWQGEFCDKCTPHPGCVHGTCVEPWQCLCDTNWGGQLCHQDLNTC
GTQQPCLNGGTCSNTGPDKYHCSCPDGYSGQNCERADNACLSDPCFNGGRCVESSQGFEC
RCAPGWTGPSCTINVDECSPKPCSHGGTCVDLVNGFRCVCPAQWTGKTCLIDADECAEKP
CVNAHLCRNLIGGYFCECLPGWTGQNCDIDVDDCEEQCQNGGSCKDLVNGYKCWCPPGFS
GEHCENDVDECASQPCLNRGQCRDDVNGFQCLCPPGFSGTFCQLDIDYCKGNPCQKGGQC
FNLETDYFCQCPEDYEGKNCSHLKDHCRNTPCQVIDSCTVAVVSNSTPGKVRNISSNVCG
PHGRCRSLAGGHFSCDCQDGFTGTYCHENINDCESGPCRNGGTCIDKVNAYQCICADGWE
GADCQTNIDDCSANPCNGRGSCRDLINDFYCECKNGWKGKTCHSRESQCDGSTCKNGGTC
YDEGDAFKCTCAPGWEGTSCNIAQNSSCLPNPCENGATCVVSGAGFTCVCKEGWEGPTCS
QNSNDCNPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGATCQDEID
GYRCLCPPGRTGPRCQEVSGRPCKVGSRPVADGAQWDEDCNTCHCHNGRVACTKLWCGLR
SCRLLGAGRGGGGGGDCPAGQSCVPLREDRCFVHPCPAQGECWSSSRVHARSRCHPDSDC
ANFTLTFTKDLMPQGVTVEQVCRELRNVVKNLSSESSIYINCEASSTSSSEIHVTIQVSD
EGDSSQAPVKEITDRIMELVSKRTANGTILTAIAEVWVQPKPSSSTNDYLMPVLVSVATL
IWTLALILAAVWCIRRRRKRNSSATANGYVSAPSTAATAEDNNAANNARENLNQIKNRLE
KNAVSAKISPGEDDPDAEKRLLKGWRPAYAPVERDERTGLDAASGKCAHWTSKRDNRELE
SKNSLHRMEYIV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcacggtccaggtctgaccgccgcatgccttcagctcctggtgcactgcgtt
tacatccagctttgcgcagcatcaggacacttcgagctgcgggtggtgcccacgcggaac
gccaacggcgagccgcaggccgccccctgctgcggcgggacgcggagcccgtccgagagc
gacagatgcgccaggagcgaatgccatacctatttccgcatctgtctcaaggagtaccag
tcgagggtgacccccggcgggtcgtgcagcttcggcagcgggaccacgccggttatcgct
gggaatacggcggcgtcgaaaagcctggcggaaaacgacaaggctcacgtcgtgctgccc
ttcagcttcgcctggccgaggtcgtacactctggtcgtggaggccttggacttcaacaac
gactcgagcggcggcggcggcagtggtcaggtgatcgagaagaccgtgcagtcgggcatg
atcaacccgggtccacagtggcagacgctgaagcgcagcggcgccgtggtccagtacgac
ttccaggtccgcgtcacctgcgacgagcactactacggcttcggctgcaacaagttctgc
cggcccagggacgacttcttcggccactacaactgcgaccacaacgggaacaagacctgc
ctggagggctgggcgagccccgagtgcggcaaggcgatctgccggcagggctgcagtccc
aatcacggatcctgcaagagtcccggagagtgcagatgcttgtacgggtggcagggcgag
ttttgtgataagtgcacccctcaccccggctgcgtacacgggacctgcgtggaaccctgg
cagtgcctgtgcgataccaactggggaggacagctctgccatcaagatctgaacacctgt
ggcacgcagcagccgtgtctgaatggaggaacctgcagtaacacaggacccgacaagtac
cactgttcatgtcccgatggttactccggccagaactgtgaacgagcggataacgcctgt
ctgtctgatccctgcttcaacggtggccgctgtgtggagagcagtcaggggttcgagtgc
cgctgcgctccgggctggaccggcccgtcctgcactatcaacgtggacgagtgcagtccg
aagccctgtagccacggcggtacgtgtgtggatctggtgaacggcttcaggtgcgtctgt
ccggcacagtggaccggcaagacctgcctcatcgacgcggacgagtgcgcggagaagccg
tgtgtgaacgctcacctgtgccggaacctgattggtggatatttctgcgagtgcctccct
ggatggacgggacagaactgcgatatcgatgtggacgactgtgaggaacagtgccaaaac
ggcggatcctgtaaggacctggtgaacgggtacaagtgctggtgcccgccgggcttctcg
ggcgagcactgcgagaacgacgtggacgagtgcgccagccagccctgcctgaaccggggc
cagtgccgcgacgacgtcaacggcttccagtgcctgtgcccgcccggtttctctggaacc
ttctgccagctggacatcgactactgtaaggggaacccgtgtcagaaaggcggtcagtgc
ttcaacctggagacggattatttctgccagtgcccggaggattacgaggggaagaactgc
tcccatctgaaggaccactgccgcaacacaccgtgccaagtcatcgacagctgcacggtg
gccgtggtgtccaacagcacgccgggcaaagtgcgcaacatctcctccaacgtgtgcggc
cctcacgggcgctgccgcagcctcgccgggggtcacttcagctgcgactgtcaggacgga
ttcaccgggacctactgccacgagaatataaacgactgcgagagcggcccgtgcaggaac
ggagggacgtgcatcgataaggtgaacgcgtaccagtgcatctgcgccgacggctgggag
ggagccgactgccagactaatatcgacgactgcagcgcgaacccgtgtaacggccgcgga
tcgtgccgcgacctcatcaacgacttctactgcgagtgcaaaaacggctggaagggcaag
acctgccactcacgtgagagccagtgcgacgggtcgacgtgtaagaatggcggtacgtgc
tacgacgagggcgacgcgttcaagtgcacgtgtgcaccggggtgggagggaaccagctgt
aacatcgctcagaacagcagctgtcttcccaacccctgtgagaacggagccacctgcgtg
gtcagcggtgccggattcacctgcgtctgcaaggaaggctgggagggacccacctgcagc
cagaactcgaatgactgcaacccacacccatgctacaacagcgggacctgcgtggacggc
gacaactggtaccgctgcgagtgcgccgctggcttcgccggacccgactgtcgcatcaac
ataaacgagtgccagtcctcgccgtgcgcgttcggcgccacctgccaggacgagatcgac
ggctaccgctgcctgtgcccgcctggcagaaccggaccccggtgccaagaagtgtccgga
cggccctgcaaggtcggcagccgcccggtcgcagacggagcccagtgggacgaggactgt
aacacctgccactgtcacaacggacgagtcgcctgcacgaagttgtggtgcgggctgagg
tcgtgccgcctgctgggagccgggcgaggtggcggcggcggtggcgactgtccggcgggt
cagtcgtgcgtccctctgcgcgaggatcgctgcttcgtccatccgtgcccggcgcagggc
gagtgctggtcgagttcgagagtgcacgctcggtcccggtgccaccccgacagcgactgt
gccaacttcaccctcacgttcaccaaggacctgatgccacagggcgtgacggtggagcag
gtgtgccgggagctgaggaacgtggtgaagaacctctcgtccgaatcctccatctacatc
aactgtgaagcgtccagcacgtccagcagtgagatccacgtcaccatccaggtttcggat
gagggcgatagcagccaggcgccggttaaagagatcacggaccggattatggagctggtg
agcaaacgcaccgctaacggtaccatcctcaccgccatcgccgaggtctgggtccagccc
aaaccgtccagcagcaccaacgactacttgatgccagtgctggtttccgtggcgacgctg
atctggactctggcgctcatactggcggcggtctggtgcatcaggcggcggcgcaagcgg
aactcgagcgccacggccaacggctacgtctccgccccgtcaaccgcggcgacggccgag
gacaacaacgcggccaacaacgcgcgggagaacctgaaccagatcaagaaccgactggag
aagaacgccgtgagcgccaaaatcagcccgggcgaggacgacccggacgcggagaagcgg
ctcctgaaagggtggcggccggcgtacgcgccggtggagcgggacgagcggacggggttg
gacgccgcgtcggggaagtgcgcgcactggactagcaaacgcgacaaccgcgagctggag
tccaagaacagcttacacagaatggagtatatcgtatag
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