Trichomycterus rosablanca: 134328736
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Entry
134328736 CDS
T09921
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134328736 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134328736 (spast)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
134328736 (spast)
Membrane trafficking [BR:
trn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
134328736 (spast)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
134328736 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_22
RuvB_N
AAA_5
Vps4_C
TIP49
AAA_16
Mg_chelatase
MIT
AAA_14
IstB_IS21
NPHP3_N
DUF815
nSTAND3
AAA_2
AAA_24
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
134328736
NCBI-ProteinID:
XP_062865986
LinkDB
All DBs
Position
15:complement(31322624..31353683)
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AA seq
561 aa
AA seq
DB search
MNSLEGERVSYKKRNGVRFGPARAEEFTCDQVHLHHPRAHRFYYNINYYHYILYVFYPVL
VLFNITRFITERLCVLLYWIYKEVCIGMAARAAEDPDDAGDSIRKHHKQAFESISAALRI
DEDEKGDKDQAVRLYRRGIAELEKGIAVHVAGSGERAERARKLQHKMCNNLSMAQDRLDL
LGKSGLPASCFSKKSGSSQSLPKNKPSRPPAAALQRTASYTGPSSGRAGPQANHRAPAGR
GVARENRRPGAAPAKRDMKNFKNVDSKLANLILSEIVDSGCAVRFEDVAGQELAKQALQE
MVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESQATFFSISAASLTSKYV
GESEKLVRALFAVARELQPAIIFIDEIDSLLCERREGEHDTSRRMKTEFLVQFDGVQSGG
DDRVLVMGATNRPQELDEAVLRRFAKRIYVTLPSEETRLKLLQSLLSRHGNPLAQKELSQ
LARMTDGYSSSDLTSLAKDAALGPIRELRPEQVRNMAANEVRNIRFSDFVESLKKIKKSV
SPPTLNEYARWNREYGDTTAV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgttagaaggagaaagagtgagttataagaagagaaacggggttcggtttggg
cctgctcgagctgaagagttcacctgtgatcaggtgcacctccatcatcctcgtgctcat
cgcttttactataatattaattattatcattatattttatacgttttttacccggtactg
gtgctgtttaacataacccggtttattactgaacgcctgtgtgtgctgttatactggatt
tataaagaagtctgtattggcatggctgccagagctgcggaggacccggatgatgcaggg
gattcgatcagaaagcatcacaaacaggcgttcgagtccatctcggcagctctgagaatc
gacgaggatgagaaaggtgacaaagaccaggccgtgcggttgtaccgcaggggcatcgcc
gagctggagaagggcatcgccgtgcacgtggcgggatccggcgagagagccgagcgagcc
aggaagctccagcataaaatgtgcaacaacctgagcatggcgcaggaccgcctggacctc
ctgggtaagagcgggttgccagccagctgcttctccaaaaagtccggctcctctcagtcc
ctgccgaagaacaagccctcgagaccccccgcagccgccctccagcgcaccgccagctac
accgggccctcgtcgggtcgggccgggccccaggccaaccaccgggctcccgctggacgg
ggcgtcgcccgagagaaccgtaggcccggcgccgccccggcgaagagggacatgaagaac
ttcaagaacgtggacagcaaactggccaacctcatcctcagcgagatcgtggacagcggc
tgtgcggtgaggttcgaggacgtcgccggtcaggaactggccaagcaggcgttacaggag
atggtcatcctgcccgccctgcgcccggagctgttcacaggactgagagcgccggccaga
ggcctcctgctgttcgggccccccgggaacgggaagaccatgctggctaaagccgtcgcc
gccgagtcccaggccaccttcttcagcatcagcgccgccagcctgacctccaaatacgtg
ggtgaaagtgagaagctggtacgcgccctgttcgccgtggccagggagctgcagccggcc
atcatcttcatcgacgagatcgacagcttgctgtgtgagaggagagaaggagaacacgac
accagcaggaggatgaagaccgagttcctggtgcagttcgatggggtgcagtcgggaggt
gacgaccgggtgctggtgatgggagccacgaaccgtcctcaggaactggacgaagccgtc
ctcaggcgcttcgccaagcggatctacgtcaccctgccgtctgaagagacccggctgaag
ctgctgcagagtcttttgagcagacatggcaacccgctggcacagaaggagctgagtcag
ctggccaggatgacggacggctactccagcagtgatctgacctccttggccaaggacgcc
gcgctcggacccatacgcgagctgcgcccggagcaggtcaggaacatggcggccaacgag
gtgaggaacatccgcttctccgatttcgtcgagtccctgaagaagatcaagaagagcgtg
agtcctccgaccctgaacgagtacgccaggtggaaccgggagtacggagacacgacggct
gtatga
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