Trichomycterus rosablanca: 134329183
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Entry
134329183 CDS
T09921
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
trn
Trichomycterus rosablanca
Pathway
trn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134329183 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134329183 (taf5l)
03036 Chromosome and associated proteins [BR:
trn03036
]
134329183 (taf5l)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134329183 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
134329183 (taf5l)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
134329183 (taf5l)
STAGA complex
134329183 (taf5l)
TFTC complex
134329183 (taf5l)
SAGA complex
134329183 (taf5l)
SLIK complex
134329183 (taf5l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_SCAP
Beta-prop_WDR41
PAC11
DSE1_N
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_EIPR1
ASA1
Beta-prop_DCAF4
Beta-prop_HPS5
Cytochrom_D1
TRM82_WD
Beta-prop_WDR19_1st
WD_LRWD1
PD40
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
134329183
NCBI-ProteinID:
XP_062866439
LinkDB
All DBs
Position
15:complement(15621613..15636518)
Genome browser
AA seq
600 aa
AA seq
DB search
MKRGRTENIQNAVTQYLKRRQYVDVEGSLKGAKLSQSAEEMAANLMVQEESSCGNVVSAA
PCQSDPQQYETQFSRLRNFLLEAEVQWGKEVSSLLFPLFLYLHLDMARCGLKGAVDSFFS
RFHSFFQQDSEQRAIVEQLRGVITPQDVASNSKLCSLLEHKYVVHLTDEAYTYLLRYLQS
EDNSAICRVLSTHLQVEVSAVRRTEYQLYGTGLTTGNSTSSGSWAGVDGVDGTKTVDVAA
GLPPQNEAALEALQDCIKRVREGPPSLTTICFYAFENTEQLLNAAEVSPDSRLLAGAFDN
SAVKLWSLRARKLKAGPRKANVSNIRLVCDLLEEETEEEAGSEMKTLRGHSGPVYGAAFL
RDSSGLLSCSEDCTVRYWELHGFSNAAVYKGHAYPVWDISVSPCGLYFCTASKDTTARLW
TPSHAHPLRLYAGHLADVDCVRFHPNSSYIATGSADRTVRLWSTQHGGSVRLLTGHRGPV
LALAFSPDGRYLVSAGEDQRLRLWDLAAGGVLKELRGHTGAITSLAFSPDSALIASCAMD
NSVRVWDVRNAHGGGAAPPDGSSPELVGVYTGETNSVLSVQFTACNLLLVTGTAQEKQEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggccggacagaaaatatccaaaatgctgtgacccagtacctaaaaagaagg
cagtatgtggacgtggagggatcgctgaaaggggccaagctgtctcagtctgctgaggag
atggcagcaaacctcatggttcaggaagaatctagctgtgggaacgttgtttctgctgct
ccgtgccagtcggaccctcagcagtatgagactcagttctccaggttacgcaacttcttg
ctagaggcagaggtgcagtgggggaaggaggtcagttctttactcttcccgcttttcctg
tacctgcacttggatatggcacgctgtggtctgaaaggagcggtcgattccttcttcagc
cgctttcactcctttttccagcaggactctgagcagagagccattgtagagcagctccga
ggtgtcatcacgccacaggatgtggcctccaattctaaactgtgctctctgctggagcat
aagtacgtggtgcatctgacagatgaggcttacacgtacctgctgcgctacctccagagt
gaagataacagtgccatctgcagggtgctcagcacacacctacaggttgaggtgtctgcc
gtgcgtcgaacagaataccagctctatggtacagggctcaccacaggaaactccacatct
tctggaagctgggcgggagtggatggggttgatgggacaaagactgtggatgtcgcagca
gggttaccgcctcagaacgaggccgccctggaggctcttcaggactgcatcaagcgtgtt
cgtgagggtcctccatcgctcactaccatctgtttctacgcctttgagaacacagagcag
cttctgaatgctgcagaggtatcgcccgacagccgcctacttgctggtgctttcgataac
tccgccgtcaaactctggagcctcagagccaggaagctgaaggctgggcctcgcaaggcc
aatgtgtccaacatccggcttgtttgtgacctactggaggaagagacagaagaggaagct
ggcagcgagatgaagactctgcgtggtcacagtggaccggtgtacggtgcggcatttcta
cgggacagttcgggtttactgtcgtgttcagaggactgcacagtgcgctactgggagctg
catggcttcagcaatgcggcagtatacaaaggtcacgcctatcctgtttgggacatctca
gtgagcccgtgcggcctgtacttctgcacagcctcaaaggacaccacagcgaggctttgg
actccatcccatgcccacccactgcgcctctatgccgggcacctagccgatgtcgactgt
gtgcgctttcaccctaactcgagctacattgccacggggtcagctgacaggaccgtccgc
ctgtggagtacacagcatggtggctcagtgcgcttactgacgggtcacagaggccctgtg
ctggcgcttgccttctcgcccgacgggaggtacctggtgtctgcaggtgaggaccagcgg
ctcaggctttgggatttggcagcgggtggtgtgctgaaggagctacgtgggcacacaggt
gccattactagcctggcattcagccccgacagtgcgctcattgcttcgtgtgctatggat
aactcggtgcgcgtttgggacgtgaggaacgctcacggtggaggagcagcgcctccagac
ggttctagccctgaactggtgggagtttacacgggtgagacgaacagtgttctcagtgtg
cagttcaccgcttgcaacctgcttctggtaactggcacagcccaggagaaacaggaacag
tga
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