Trichomycterus rosablanca: 134329188
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Entry
134329188 CDS
T09921
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134329188 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134329188 (vps54)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134329188 (vps54)
Membrane trafficking [BR:
trn04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
134329188 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
134329188
NCBI-ProteinID:
XP_062866446
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All DBs
Position
15:complement(32253080..32274449)
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AA seq
964 aa
AA seq
DB search
MASGPGSAPAGTGPERLLRKPREATARSLPDVCPKEPTGGTRAPGDAPSVVADRHRWTVY
SSRVNLPAALNDPRLAKRESDFFTKTWGVDFVEGEVTPSYCLPNITAEHFGRYLQETNQR
EKIHERCRNICPTKDDLSLPSITNNYDKAREELEQVPKIFMRPDFALDDPATFGVVLPWS
HFSVSGGKSGRDAASSRLLQEKLSHYLDVVEVSIARQISLRSEAFFHAVSSQRQLQDRLS
EAAGAVRDLRARMAGVGRGAGRGPLRALRHSLARRNCLTLHGKLKLMAAVQQTQPTVQLL
LSTSEFVGALELINTTKEVLQQELQGVHSFRHLGSQLCEMEKLIDKMMVADFTTYARGDL
NRTFEEDSQVPEKDRLQSLVFGLLRQRKLDFLDIYSQEMLQAAKGIVRECVIRSASQVEE
IDTDGVVKLQDQMRMMTFPQWFDLLQNVFEHFLLFLTRIKATLGAIRNVVLELLDSGQRG
RAAAPAENGDDREEAAEEETPLRPGEAELAVLTHEGLFISDALSGSGRAAPSGDDPSGSD
SASGTTESSSSREHVVTSSLPTGGAAAALEDLMPSDLELGRVANNVQELLYAASDISHDR
CVKVLLAKAKDGSLERLSSAEFVRVSRAVEAFAKDTEALCCRKSVSLQGALQSQANRFVQ
RFHEERKNKLSLLLDTERWKQAEVPAEFQFLVDTIADGRIVLPHRKSAGTEDRKPSDFLV
VDEQKYAVIGTVLLLIRMFLEYCQCVNDIPSIATDMLTRLSDLLKHFNSRSCQLVLGAGA
LQVVGLKTITTKNLALVSRCLQLVVHYIPVIRAHFETKLQPKQYSILRHFHHITKDYNDH
IAEISAKLVAIMDGLFEKALTKYEVKAPMPSLCFRNICKQMAKMHEAISELLPEEQTQML
FLRINGSFKLHLKRQLARLGVVNDGGPQHGLMVVDVAFYTENIQALRSLERLDLNMPEIW
EQKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggtccgggctccgcgccggcgggaaccggccccgagcggctcctccggaag
cccagggaagcgacggcgcgctcgctccccgacgtctgccccaaggagcccacaggcggg
acgcgggccccgggcgacgccccgtcggtggtggccgaccggcaccgctggacggtctac
agctccagggtgaacctgccggccgccctgaacgacccgcgcctggccaagcgcgagtcc
gacttcttcaccaagacctggggggtggatttcgtggagggagaggtgacgccctcgtac
tgcctgcccaacatcaccgccgaacacttcggcagatacctgcaggagaccaatcagagg
gagaagatccacgagcgctgtaggaacatctgccccaccaaagacgacctctcgctcccg
agcatcaccaacaactacgataaagcccgagaggagctcgagcaggtacccaagatcttc
atgaggccggacttcgccctggacgacccggcgaccttcggcgtggtgctcccgtggtcg
cacttcagcgtctcgggagggaagagcggccgggacgccgcgtcgtcacggttactgcag
gagaaactgagtcactacctggacgtggtggaggtgagcatcgcgcggcagatctcgctc
cgctccgaggccttcttccacgccgtctcgtcccagcgccagctccaggaccggctctcc
gaggcggcgggcgccgtgcgggacctgcgggcgcgcatggccggcgtgggccggggcgcc
ggccggggcccgctgcgggcgctcaggcactcgctggcgcggcggaactgcctgacgctg
cacggcaagctgaagctgatggcggcggtgcagcagacgcagcccaccgtgcagctcctg
ctgtccacctccgagttcgtgggggcgctggagctcatcaacaccaccaaggaggtgctg
cagcaggagctccaaggggtccacagcttcaggcatctgggctcccagctgtgcgagatg
gagaagctgatcgataagatgatggtggccgacttcaccacctacgcccggggtgacctg
aaccggaccttcgaggaggacagccaggtgccggagaaggaccggctgcagtccctggtg
ttcggcttgctgaggcagaggaagctggatttcctggacatctacagccaggagatgctg
caggcggccaagggcatcgtccgcgagtgtgtgatccgctcggcgtctcaggtggaggag
atcgacacggacggcgtggtgaagctgcaggatcagatgaggatgatgacgttccctcag
tggttcgacctgctgcagaacgtcttcgagcacttcctgctcttcctcaccaggatcaag
gccaccctcggcgcgatccgtaacgtggtcctggagctgctggacagcggtcagaggggc
cgagcggccgctcccgcggagaacggagacgaccgggaggaggcggcggaggaggagacg
cccctccggcccggggaggcggagctggcggtcctgacgcacgaggggctcttcatcagc
gacgccctgagcgggtcaggacgggccgcgcccagcggggacgacccctccgggagcgac
tcggcgtccgggaccaccgagtcgtcgtccagcagggagcacgtcgtcacctcctccctg
cccacggggggcgctgccgccgcactggaagatctgatgccgtctgatctggaactgggc
cgagtggccaacaacgtccaggagcttctgtacgccgcctcggacatcagccacgatcgc
tgtgtgaaggtcctgctggctaaagccaaggacggctctctggagcgcctgagctcggcc
gagttcgtgcgggtgagtcgggcggtggaggccttcgccaaggacaccgaggccctgtgc
tgcaggaagagcgtcagcctgcagggggcgctgcagagccaggccaaccgcttcgtccag
cggttccacgaggagcgcaagaacaagctcagtctgctgctggacaccgagcgctggaag
caggccgaggttccggcagagttccagttcctggtggacaccatcgcggacggacgcatc
gtgctgccccatcgcaaatccgcaggtacggaggacaggaagccgagtgacttcctggtg
gtggacgagcagaagtacgccgtgatagggacggtgctgctgctaatccggatgttcctg
gaatactgccagtgtgtgaacgacatcccgtccatcgccaccgacatgctgacgcgcctc
tccgacctcctcaagcacttcaactcgcggagctgtcagctggtgctcggcgccggggcc
ctgcaggtggtgggactgaagaccatcaccaccaagaacctagctctggtgtctcgctgc
ctgcagctggtcgttcactacatcccggtcatccgcgcccacttcgagaccaaactgcag
cccaagcagtacagcatcctgcgccacttccaccacatcaccaaggactacaacgaccac
atcgccgagatctcggccaagctggtggccatcatggacggtctcttcgagaaagcatta
accaagtatgaagtgaaggccccgatgccgtcgctctgtttccggaacatttgcaagcag
atggccaaaatgcacgaggccatctccgagcttctacccgaggaacaaacccagatgctg
ttcttgaggatcaacggcagctttaagctccacctgaagaggcagctggcacggctgggc
gtggtcaacgacggcggcccgcagcacgggttgatggtggtggacgtggccttctacacg
gagaacatccaggctcttcgctccctcgagcgcttggacttgaacatgcccgagatctgg
gagcagaagaggtga
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