Trichomycterus rosablanca: 134329213
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Entry
134329213 CDS
T09921
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
trn
Trichomycterus rosablanca
Pathway
trn04020
Calcium signaling pathway
trn04080
Neuroactive ligand-receptor interaction
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134329213 (grin2ab)
04082 Neuroactive ligand signaling
134329213 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134329213 (grin2ab)
Ion channels [BR:
trn04040
]
Ligand-gated channels
Glutamate (ionotropic)
134329213 (grin2ab)
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
134329213
NCBI-ProteinID:
XP_062866476
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Position
15:complement(3157254..3284811)
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AA seq
1455 aa
AA seq
DB search
MGVAVHLALMAWALLGWSQAAERPPSLSVAVILGETRSVPERALRPAPGVGAPLDVSVLS
VQVNHTDPGSMLTHLCQLMARQRLHGLVYGDGTDQESIAQMLDFVSSQTAMPIVGIHGGA
GMTMAEKDASSSFFQFSASLQQEALLMLAVMEEYDWHVFSVVTTRFPGHQEFVSTIRATV
EHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEAELVMVEARSLGLVG
AGFVWIVPSLTSGNPERTPEAFPPGMISIAYDEWDYPLETRVRDAVGIFSYAAAAMFQEQ
GRIPDGTVSCSGQPEKSDVPPSALRRYMMGVTLEGRDLSFMDDGYQVNPKLVVVVLNTER
EWEKMGQWENHSLILKFPVWPRYNSFGDAEADENHLSIVTLEEKPFVIVDDVDILTGTCM
RNSVPCRKHIKDNSTGGSYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNV
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRNNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLV
FNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQKGSYWKRLVDLAILGTIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLLTFCWEHLFYWRLRYCFTGL
CSGRPGLLFTISRGIWSCIHGVHIEMKKLPVLDFSPQANMLHLLKSAKEITTLGVTSPKR
PVTSMLPHSPGILDFMTGNKGNNLTPKDVLYNNTNPMLVNRLKEPLNNVLLPGQRALPQP
DPQANVAGSSGTGGSGDSAIVPASKTRALWKKSVETLRQTQEPNDDSPPSVAPPSVFEPL
AAMKSQRYLPEDLPARSDVSDSSGRVDLQKQHKVKETLRKRNRLPRDMSDVELSTLHSQA
SQQSNHSNQVYSQSSQGSQIYTIDSVDQEHGMHYPDIFSEHRDNKHHPPPSSEQQPIIQL
NSNALPQTQEPDVMQNPSAASKEKKYNTYGKPGGVGISHGGTGSTQDHRQTHCRSCLSKF
SNYSGLYTMRPPQYRCEACLHSANLYDISEDQLLHPNMGHIRGGSVDRSFCAFLPHPNTS
FTAYLPQSDQEGDGIITHYQDEGAFVHRQHSYENLPQKNSSRRVSLQDSTPYANLHTSTM
IPDKLPKSQSAHLNHTLAGVGVGVTELGIGRRTKSMYPARPTENPFLQTLRDDQRLAHGR
SATDIYKQLVPLTLNPITDGKGLGMAVVTPDLYYTEQIMPYVAPLPLGSYPAPRAMSAGG
ARRVYKRMPSIESDV
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgcggtccacctggcactgatggcctgggctttgctgggctggtctcaggca
gccgagaggcctccctctctgagcgtggcggtcatcctcggagagacacgcagcgttccg
gagcgggcgctgcgcccggccccgggcgtcggggcaccgctggacgtgagcgtgcttagc
gtgcaggtgaaccacacggacccgggcagcatgctcacccacctctgccagctaatggcg
cgccagcggttgcacggtctcgtgtacggagacggcaccgaccaggagtccatcgcccag
atgctggactttgtctcttcccagacagccatgcccatcgtcgggatccacggtggggcc
ggcatgaccatggccgagaaggacgccagctcctccttcttccagttcagcgcctccctc
cagcaggaggcgctgctcatgctggccgtcatggaggagtacgactggcacgtcttctcg
gttgtgaccaccaggttccccggccaccaggagttcgtctcgaccatccgcgccaccgtg
gagcacagcttcgtgcgctgggacctgcagagcgtggtgacgctggacggcgtgggcgag
cccgaggaccgagcccacgtgcagctcaagcgcatccagtcgcccgtcatcctgctctac
tgctccaaggacgaggccgagctggtgatggtcgaggcccgttcgctcgggctggtgggc
gccggcttcgtgtggatcgtccccagtctgacgtcggggaacccggagcggacgcccgag
gcttttccgccgggcatgatctccatagcgtacgacgagtgggactatcctctggagacc
cgggtcagggacgcggtgggaatattcagttatgcagcggctgccatgtttcaggagcag
ggacgcataccggacgggacggtgagctgttcggggcagccggagaagtcggacgtgcca
cccagtgctctgcgcaggtacatgatgggcgtcactctggagggcagagatctgtcattc
atggacgacggctaccaggtcaaccccaaactggtggtggtggttctgaacacagagaga
gagtgggagaagatgggccagtgggagaaccactccctgatcctgaagttccccgtgtgg
ccgcgctataactcctttggggacgcggaggcggatgagaaccacctgagcatcgtgacc
ctggaggagaagcccttcgtgatcgtggacgacgtggacattctgaccgggacctgcatg
cgcaactccgtcccctgcaggaaacacatcaaagataactccaccggcggctcgtacatt
aaacagtgctgtaaaggtttctgcatcgacatcctgaagaagattgcccggaacgtcaag
ttcacctacgacctttacctggtcaccaacggcaaacacggcaagaagatcaacaacgtg
tggaacgggatggtgggagaggtcgtttacaagaaagcggtgatggctgtgggttcgttg
accataaacgaggagaggtcggaggtcatcgacttctctgtaccttttgttgagacgggg
atcagcgtgatggtgtcccgcaacaacggcactgtttcaccctcggcgtttctggaaccc
ttcagcgcgtcggtgtgggtgatgatgttcgtgatgctgctcatcgtcacggcgatcgcg
gtcttcctgttcgagttcatcagtccactgggcttcaaccgaaatctcgcccagggcaaa
gacccccacggtccgtccttcaccatcggtaaagctgtctggcttctgtggggtctggta
ttcaacaactctgtgccagtccagaaccctaaaggcaccaccagtaagttcatcgtgtcc
gtgtgggccttcttcgccgtcatcttcctggccagttacactgcaaacctggccgccttc
atgatccaggaggagtttgtggaccaggtgactggcctcagtgaccggaagttccagagc
ccatactccttctcaccaccgtttcggttcggtacggtcccgaatggcagcactgagagg
aacatcagaaagaactacccagatatgcaccagtacatggtcaaataccaccagactgga
gtccaggatgcactggtcagccttaagactggcaaactggacgcgtttatctacgacgcc
gccgtgctgaactacatggcaggacgagacgatggctgtaagctggtgaccatcggcagc
ggttacgtcttcgccaccaccggttacggcatcgcccttcaaaaaggatcatactggaaa
cgcctggtggatctcgccattcttggtaccatcggggatggtgagatggaggaactcgag
gcccagtggctgacgggtatctgccataacgagaagaatgaagtgatgagcagtcagctg
gacgtggacaacatggctggagtgttctacatgctggcggctgccatggccctttccctg
ctcaccttctgctgggagcacctcttctactggcgtctccgttactgcttcactggtctt
tgctccggacggccgggacttctcttcaccataagtaggggtatctggagttgtattcat
ggcgttcacattgagatgaagaaacttcccgtgttggatttcagtcctcaagccaacatg
ctgcaccttctaaaatcggccaaggagattaccactttaggggtgacctctccaaagcgt
ccagtgaccagtatgcttccccatagccctggaatactggactttatgactgggaacaaa
ggcaacaatttgactccgaaagacgtcctctacaacaacaccaaccccatgcttgtgaac
cgcctcaaagaacctctcaacaatgtccttttgcctggccaacgggcacttccccaacct
gatccccaggctaatgtggctggcagtagtggcaccggaggcagtggagactcagcaata
gttcccgcctcaaagacccgggctctttggaaaaagtcagtcgaaactctgcgacagact
caagagccgaacgatgattcgccaccttccgttgccccgccctcagtctttgagccactc
gcagccatgaagagccagcggtatctgcccgaagatctacccgcacgctccgacgtgtcc
gattcgtccggccgcgtggacctccagaagcagcacaaggtcaaagagacgctccgaaag
cgcaaccgcctcccacgggacatgagcgacgtggaactatccacgctgcacagccaggct
agccagcagagcaaccacagcaaccaggtctactcgcagagcagccagggcagccagatc
tacactatcgactcggtggaccaggagcacggcatgcactacccggacatcttcagcgag
cacagagacaataagcatcacccgcctccgtcgtctgagcaacagcccatcatacagctc
aacagcaacgcgctccctcagactcaagagccggacgttatgcaaaacccctccgctgct
tcgaaggagaagaagtacaatacctacggcaagcctggcggggtaggaatcagtcacgga
gggaccggatctacccaggaccatcgacaaacccactgccgtagctgcctttccaagttc
tccaactattctgggctttacaccatgcggcctcctcagtaccgctgcgaggcctgtttg
cattccgccaacctgtatgacatcagcgaggatcagctcctgcaccctaacatgggtcac
atccgaggaggcagcgtggaccggagcttctgtgcgtttctgccgcaccccaacacttcc
ttcacagcctacctaccccagagcgaccaggagggcgacgggatcatcacccactatcaa
gacgagggcgcgttcgtccatcgccagcactcctacgagaacctgccccagaagaattcc
tcacggcgtgtaagtctgcaggatagcaccccgtacgccaacctgcacacctccaccatg
atccccgataagctcccgaagagccagtcggcacatctcaaccacacgctcgccggggtc
ggtgtcggcgttacggagctcggcatcggccggcgcactaaatccatgtacccggcccgg
ccgaccgagaaccctttcttacagacgctccgggacgaccagcgcctggctcacgggcgc
agcgccacagacatttacaaacagctggtgccgctcacattaaatcccattaccgacggc
aaggggctcggcatggcggtggtgacccccgacctctattacaccgagcagatcatgcct
tatgtagcccctctgccactcggctcctacccggcccctagagcaatgagcgctggcggt
gcacgacgcgtctacaagaggatgcccagcatcgagtccgacgtctga
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