KEGG   Trichomycterus rosablanca: 134329300
Entry
134329300         CDS       T09921                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trn03019]
    134329300
Messenger RNA biogenesis [BR:trn03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     134329300
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_4 UBA_N4BP1_C zf-CCCH_2 Omega-toxin
Other DBs
NCBI-GeneID: 134329300
NCBI-ProteinID: XP_062866583
LinkDB
Position
15:complement(6508721..6531248)
AA seq 861 aa
MGLKDHLDDGAGRILDLGLDLDYLHVKAVDRQVGADAPPSMEKGSLDSGDDGAPDSITPA
PSSRADSEDSAGSDGEVETGCTLAQSDGSARTVHPPLCRSLCLDLDSPGLPEVTQNTQDD
IHPSDTLREYQTKLEFALKLGYAEDLVRLVLSKLGSDALINDILGELVKLGSKSDNDSGA
AGLSTPNSSSLVSSGSSSSSACSFSDSTDSRRSESPSQAMLDDKDNLRPIVVDGSNVAMS
HGNKEVFSCQGIQLAVDWFLERGHKDITVFVPAWRKEQSRPDAPITDQEILRRLEKDKIL
VFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYS
FVNDKFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQ
PQRAVADELRASAKTSAAKGTSESNLVKSHSVPGGSRNDRAGEGKRGHPKRQSDPTVRTL
SYSDVEDKLSSKTKADPQKSSLALPPAPGGPPSCNAYPQDQREPPTCFSKNHALPAFPQT
DSYPTCESPDLSYYSIVRAYSGLNLSSQRSPERPFLPDMDTRLSSVASDCSSEGSASSDS
YGTAPPGERSCMSSPDSLLDDGLKCHHHLHHHRRQYPMPMVLPPPPHHHHQGRVLSPVPS
AHPGYHHGMARGHSFTQDEQSPEPHFKHSLSYMGQQLQHQMVAARSSCPGEYPPHSSPMG
RGLASTRLDSVSDSRLYERSPLLTRNPYSDQERLASWEPYYQQPCYEPFTFQSLPENRQQ
TWRVPWGQASIPPPHPSHTSHQHQEPPPLSRYQEVREKVFVNLCNIFPTELVRLVMGRYP
HVTDAQQLAAAILAEKSQSGY
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctggatgatggagcaggccgcatcctcgacctggggctggat
ctggactacctccacgtgaaggctgtagaccgacaggtcggtgctgatgcccctccaagc
atggaaaagggctcattggactccggtgatgacggggcccctgactctataacacccgct
ccttcatcccgggccgattcggaggacagcgccggttctgacggagaggtggagactggc
tgcacactcgcacagagcgatggatcagcccgaaccgtacacccacccttgtgccgctct
ctgtgcctggatctggattctccagggttaccggaggtcacacagaacacacaggacgac
atacatccttctgacacactcagggagtaccagaccaagctggaatttgctctgaagctg
ggatatgctgaagacctagtccggctggtccttagcaagctcgggtcagatgcactgatc
aacgacatcctaggagagctggtcaaactcggcagcaagtccgacaacgatagtggtgca
gcaggtttatctacacccaattcttcatccctagtgtcttccggttcatcgtcttcttcg
gcatgtagcttttctgactctactgattcacgtcggtctgagtcgccatctcaggcaatg
ctggatgacaaggataacctacgaccgatagttgtggatggcagcaatgtagccatgagc
cacggcaacaaggaggtgttttcctgccagggcattcagctcgcagtggactggttcctt
gagcgtggccacaaagacatcacagtgtttgtaccagcctggaggaaagaacagtcccgg
cctgatgctcctatcacagatcaggagattctaaggcgactggagaaggacaagattcta
gtcttcaccccctctcgcagggtacagggtcggagagtggtgtgctacgatgaccggttc
atcgtcaagctagcctacgaatcagacggcatcatcgtctctaacgacaactacagagac
ttagcggtggagaaaccagaatggaagaaatttatcgatgaacgactcctcatgtactcg
tttgtcaacgataagttcatgcctcctgatgatcctctaggtcgtcacggtcccagtcta
gagaacttcctaagaaaaagacccatcattcctgaacacaaaaagcagccctgtccttat
ggtaagaagtgcacctacgggcataagtgcaagttctaccaccccgagcgaggcacccag
ccccagcgtgctgtagctgatgagctccgtgctagtgctaagacctctgcagccaaagga
actagtgaatccaacctagtgaaaagccacagtgtacccgggggctcccgtaacgacaga
gctggcgagggaaagcgcgggcacccaaagaggcagtccgaccccactgtccgcaccctc
tcttacagcgacgtagaggacaagctgagctctaaaaccaaagcagaccctcagaagagc
agcctggctctgccccccgcaccaggtggtccaccttcctgcaatgcttacccacaagat
cagagagaaccaccaacatgcttctccaaaaaccatgctctaccagcatttcctcaaacg
gactcctaccccacctgtgagtctccagaccttagctactactccattgtccgggcctac
tctggtctcaacctgtccagtcaaagaagcccagagcgcccctttctgccagacatggac
acgagacttagttcggtggcatcagactgcagcagtgaaggcagtgccagctctgactcg
tatggcacagcacctcctggtgaacgttcctgcatgagctcacccgactccttgctggat
gatggactcaagtgccatcatcatcttcatcaccaccgcagacagtacccaatgcctatg
gttcttcctccgccgccacatcaccaccatcagggtcgtgtactttccccagtcccatca
gcacacccggggtaccaccatggaatggctcgtgggcacagctttacacaggatgagcag
tctccagagcctcactttaagcactcgctgtcctacatgggccaacaactccagcaccaa
atggttgccgctagatccagttgtcctggggaatacccccctcacagttctccaatgggc
cgaggcttagcttccacacgtcttgatagtgtgtccgactccaggctctatgagcgctct
cctttgttgaccaggaatccatattcagatcaggaacggctggcaagctgggagccgtat
taccagcagccctgctacgagcccttcaccttccagagccttccagaaaaccgacagcaa
acatggcgtgtaccctggggacaagcctccattcctcctcctcatccatcccacacttcc
catcagcatcaggagccgccccctctcagccgctaccaggaggtacgcgagaaagtcttc
gtcaacctgtgcaacatctttcccactgagcttgtgcgcctggttatgggtcggtaccct
cacgttacagatgcccaacaactggcagccgctatcctggctgaaaagagccagtctggg
tactga

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