Entry |
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Name |
(RefSeq) probable ribonuclease ZC3H12C
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KO |
K18668 | ribonuclease ZC3H12 [EC:3.1.-.-] |
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Organism |
trn Trichomycterus rosablanca
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Brite |
KEGG Orthology (KO) [BR:trn00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:trn03019]
134329300
Messenger RNA biogenesis [BR:trn03019]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134329300
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
15:complement(6508721..6531248)
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AA seq |
861 aa
MGLKDHLDDGAGRILDLGLDLDYLHVKAVDRQVGADAPPSMEKGSLDSGDDGAPDSITPA
PSSRADSEDSAGSDGEVETGCTLAQSDGSARTVHPPLCRSLCLDLDSPGLPEVTQNTQDD
IHPSDTLREYQTKLEFALKLGYAEDLVRLVLSKLGSDALINDILGELVKLGSKSDNDSGA
AGLSTPNSSSLVSSGSSSSSACSFSDSTDSRRSESPSQAMLDDKDNLRPIVVDGSNVAMS
HGNKEVFSCQGIQLAVDWFLERGHKDITVFVPAWRKEQSRPDAPITDQEILRRLEKDKIL
VFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYS
FVNDKFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQ
PQRAVADELRASAKTSAAKGTSESNLVKSHSVPGGSRNDRAGEGKRGHPKRQSDPTVRTL
SYSDVEDKLSSKTKADPQKSSLALPPAPGGPPSCNAYPQDQREPPTCFSKNHALPAFPQT
DSYPTCESPDLSYYSIVRAYSGLNLSSQRSPERPFLPDMDTRLSSVASDCSSEGSASSDS
YGTAPPGERSCMSSPDSLLDDGLKCHHHLHHHRRQYPMPMVLPPPPHHHHQGRVLSPVPS
AHPGYHHGMARGHSFTQDEQSPEPHFKHSLSYMGQQLQHQMVAARSSCPGEYPPHSSPMG
RGLASTRLDSVSDSRLYERSPLLTRNPYSDQERLASWEPYYQQPCYEPFTFQSLPENRQQ
TWRVPWGQASIPPPHPSHTSHQHQEPPPLSRYQEVREKVFVNLCNIFPTELVRLVMGRYP
HVTDAQQLAAAILAEKSQSGY |
NT seq |
2586 nt +upstreamnt +downstreamnt
atgggcctgaaggaccatctggatgatggagcaggccgcatcctcgacctggggctggat
ctggactacctccacgtgaaggctgtagaccgacaggtcggtgctgatgcccctccaagc
atggaaaagggctcattggactccggtgatgacggggcccctgactctataacacccgct
ccttcatcccgggccgattcggaggacagcgccggttctgacggagaggtggagactggc
tgcacactcgcacagagcgatggatcagcccgaaccgtacacccacccttgtgccgctct
ctgtgcctggatctggattctccagggttaccggaggtcacacagaacacacaggacgac
atacatccttctgacacactcagggagtaccagaccaagctggaatttgctctgaagctg
ggatatgctgaagacctagtccggctggtccttagcaagctcgggtcagatgcactgatc
aacgacatcctaggagagctggtcaaactcggcagcaagtccgacaacgatagtggtgca
gcaggtttatctacacccaattcttcatccctagtgtcttccggttcatcgtcttcttcg
gcatgtagcttttctgactctactgattcacgtcggtctgagtcgccatctcaggcaatg
ctggatgacaaggataacctacgaccgatagttgtggatggcagcaatgtagccatgagc
cacggcaacaaggaggtgttttcctgccagggcattcagctcgcagtggactggttcctt
gagcgtggccacaaagacatcacagtgtttgtaccagcctggaggaaagaacagtcccgg
cctgatgctcctatcacagatcaggagattctaaggcgactggagaaggacaagattcta
gtcttcaccccctctcgcagggtacagggtcggagagtggtgtgctacgatgaccggttc
atcgtcaagctagcctacgaatcagacggcatcatcgtctctaacgacaactacagagac
ttagcggtggagaaaccagaatggaagaaatttatcgatgaacgactcctcatgtactcg
tttgtcaacgataagttcatgcctcctgatgatcctctaggtcgtcacggtcccagtcta
gagaacttcctaagaaaaagacccatcattcctgaacacaaaaagcagccctgtccttat
ggtaagaagtgcacctacgggcataagtgcaagttctaccaccccgagcgaggcacccag
ccccagcgtgctgtagctgatgagctccgtgctagtgctaagacctctgcagccaaagga
actagtgaatccaacctagtgaaaagccacagtgtacccgggggctcccgtaacgacaga
gctggcgagggaaagcgcgggcacccaaagaggcagtccgaccccactgtccgcaccctc
tcttacagcgacgtagaggacaagctgagctctaaaaccaaagcagaccctcagaagagc
agcctggctctgccccccgcaccaggtggtccaccttcctgcaatgcttacccacaagat
cagagagaaccaccaacatgcttctccaaaaaccatgctctaccagcatttcctcaaacg
gactcctaccccacctgtgagtctccagaccttagctactactccattgtccgggcctac
tctggtctcaacctgtccagtcaaagaagcccagagcgcccctttctgccagacatggac
acgagacttagttcggtggcatcagactgcagcagtgaaggcagtgccagctctgactcg
tatggcacagcacctcctggtgaacgttcctgcatgagctcacccgactccttgctggat
gatggactcaagtgccatcatcatcttcatcaccaccgcagacagtacccaatgcctatg
gttcttcctccgccgccacatcaccaccatcagggtcgtgtactttccccagtcccatca
gcacacccggggtaccaccatggaatggctcgtgggcacagctttacacaggatgagcag
tctccagagcctcactttaagcactcgctgtcctacatgggccaacaactccagcaccaa
atggttgccgctagatccagttgtcctggggaatacccccctcacagttctccaatgggc
cgaggcttagcttccacacgtcttgatagtgtgtccgactccaggctctatgagcgctct
cctttgttgaccaggaatccatattcagatcaggaacggctggcaagctgggagccgtat
taccagcagccctgctacgagcccttcaccttccagagccttccagaaaaccgacagcaa
acatggcgtgtaccctggggacaagcctccattcctcctcctcatccatcccacacttcc
catcagcatcaggagccgccccctctcagccgctaccaggaggtacgcgagaaagtcttc
gtcaacctgtgcaacatctttcccactgagcttgtgcgcctggttatgggtcggtaccct
cacgttacagatgcccaacaactggcagccgctatcctggctgaaaagagccagtctggg
tactga |