Trichomycterus rosablanca: 134329301
Help
Entry
134329301 CDS
T09921
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134329301 (rims1b)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
134329301 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
134329301 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
Motif
Other DBs
NCBI-GeneID:
134329301
NCBI-ProteinID:
XP_062866584
LinkDB
All DBs
Position
15:12241225..12346293
Genome browser
AA seq
1469 aa
AA seq
DB search
MAASVGPQGGPRAPAAPAPTSMPDTPDLSHLTEEERKIILAVMARQKEEEEKEQDMLKTL
HQQFESYKEQVQRIGVESKHQQTSHKDDAPTCGICHKTKFADGCGHLCSYCQTKFCARCG
GRVSLRSNNCLIGNDRVMWVCNLCRKQQEILTKSGEWFSSGPRGRPLSAGAPVAVPETDK
DGKLRSRSQAPSGAILANANDTQPPTDRAKGADTMPASRARSEPPREKKRPLSLHEQNGK
VVGRGEKRVGPGRQPLQASEERIPGERRDSRRLQKGHTQEYEHPNGEPVHPDQRRRKEDE
ERERQRREEEYQARYCSDPNLARYPVKPQKEEQEMRMHAKVSKMRQERHHSDMAINEVGL
AQGGGETLGNRVSRRGATTEIRKALLENHRSCSVDRTVGGGTGGRPGPLQKQGHSGSHVS
PGGPLDLRDGQGSTGYLAPGSAALLHKTKREKAAESFRKDSSLSSDQSECLRPPPPRAYR
SKRVLNKRQMSISSSEEEGGSTPEYTSCEDVEIESVSEKGDWDCHPLDPTIWHHPVTWQP
SKEGDHLIGRITLSKRSAVPQEAGSLLGLKVVGGKMTDSGRLGAFITKVKKGSLADIVGH
LRAGDEVLQWNGKALPGATKKEVYNIILESQSAPQVEIVVSRPIGATPRLPERSHPPLES
TGSSSIDESHKVDRPSISVMSPTSPGILRDIPQDLPGQLSVKLWYDKVGHQLIVNVLQAI
DVSPQLDGRPRNPYVKMYFLPDRSDKSKRRTKTIKKSLDPKWNQTFLYSHVHRRDFRERM
LEITVWDQPRAQEEESDFLGEILIELETALLDDQPHWYKLQTHDVSSLPLPQPSPYLPRK
HVHSDSSSKKLQRSHRIIETDYDDAITVVSSADRNSREIERCSTLTVPERQATIQHRSRS
VSPHREDQCRSRSRHTHVPMQRSLDEIHQNRHNSQSPIHYHNTQQEHRSLDSDYDYSEDS
EYLETHRSIRGGSAECLHTNSDLQPSFDRVRSASTTCLRPESSFHSPDRERLTGSLDRPA
CTNTNKKSVDNDRAHVRGGRSSPTEAPLSVRRGRQLPQLPAKSSSIEQALAVEERARQLS
QIRVSSYRPGSSASSGHDQDMKLKNKREMYKRSCDNVSARSSDSDISDVSAISRASSASR
LSSASYMSVQSERPHGRISRQVRASAGRSMLKSTSVSGDINTPERTDGSQSDTALSTVGS
SSKKRRSSLNARFVAIVGSRRSRSTSQLSQTEASSKKSKGSGTIQRSQETGIAVELQRNM
SRQPSRESNNGSMASYNSEGSPIFPAVRVEAQFSDFLDGLGPAQLVGRQTLATPAIGDIQ
IGMVNKKGKLEVEVIRARGLIQKPGSKSLPAPYVKVYLLENGAYVAKKKTKIARKTLDPL
YQQTLQFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLASNVIGWYKLFPPSS
LVDPTLASLTRRASQSSLEGSSAPGAVRS
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcggtagggccccaaggtggcccacgggctccggcagctccggctccgaca
tccatgcccgacacaccggacttaagccacctcactgaggaggagaggaagatcattctg
gctgtaatggcgcgccagaaagaggaagaggagaaggagcaagacatgttaaagacgctt
catcagcagtttgagagctataaggagcaggtgcagcggatcggggtggagagcaaacat
cagcagacctcccacaaggacgatgcccctacctgtggaatctgccataagacaaagttt
gcagacggctgcgggcacctctgttcctactgccagaccaagttctgtgcccgctgtgga
gggagggtgtctctccgctccaacaactgtctcatagggaatgacagggtgatgtgggta
tgcaacctgtgcagaaagcagcaggagattctcaccaagtctggagaatggttctcatca
ggaccaagaggcaggccactgagcgctggtgctcccgtggccgtccctgagactgacaaa
gacggaaagttgcgctccaggtcacaggcaccatcgggagcgatcctcgcaaacgctaac
gacacccagccacccactgacagagccaagggagcggacaccatgccagcctcacgcgcc
cggagcgaaccaccacgagagaagaaaaggcctctgtccctacatgaacagaatggtaag
gttgttggcagaggtgaaaagagagtgggcccgggcaggcagcctttacaggcgtcagaa
gaacgtattccaggtgaaaggagggacagcaggcgtctgcagaaaggccatacgcaagaa
tacgagcaccctaacggtgaacctgtccatcctgaccagagaaggagaaaggaagatgag
gagcgagagcgccagcggcgggaggaggagtaccaggctcgttactgtagtgaccccaac
cttgctagataccctgtcaaacctcagaaagaggaacaagagatgcgcatgcatgccaaa
gtgtccaaaatgcgccaagaacggcaccacagcgacatggccatcaacgaggtaggacta
gctcaaggtggcggagagaccctgggcaaccgagtgagcaggaggggagcgaccaccgag
attcgcaaggcactcttggaaaaccaccggtcgtgctctgtggacaggaccgtggggggt
ggtaccggtgggaggcctggacctctccaaaaacagggtcatagtggctctcatgtgagc
cccgggggtcccttagacctgagagacggacaaggctccactggctacttggcgcctggc
tcggcagctttacttcacaagaccaaacgagagaaggctgctgaaagctttcggaaggat
tcctctctcagttcagaccagtcagagtgtctccgaccccctccgccccgggcataccgg
tctaagcgagtccttaacaagaggcagatgtcgatcagcagctcagaggaagaaggaggg
tctacacctgagtacaccagctgtgaagatgtggaaattgaaagtgtcagtgagaaaggt
gactgggactgtcatcctctagaccctacaatttggcatcatcctgttacgtggcagccg
tccaaagagggagatcatttgattggccgcattactttgagcaaacgttcagctgtgccc
caagaagctggctccctgctcgggctaaaggtggttggcggaaaaatgaccgattctggg
agacttggagcttttatcaccaaagtaaagaaaggaagtcttgcagatattgtaggacat
ttacgtgcaggtgatgaggtgctgcagtggaatggaaaggcgttgcctggagcaaccaag
aaggaggtgtataacatcattttagagtcacagtctgcacctcaagtagaaatagttgtt
tcaaggccaattggagctacaccacggcttccagagaggtcacaccctcctctggaatca
actggttccagttcaatagatgagtctcacaaggtggatcgtccctctatatcggtaatg
tctcccacaagtccaggaatcttaagagacatccctcaggatctaccaggccagctttct
gtaaaactgtggtatgacaaggtgggtcatcagcttatcgtcaacgtattacaagccata
gacgtttctcctcaactagacggccgaccacgtaacccatatgtcaagatgtacttccta
cctgacagaagtgacaagagcaagaggaggacaaagacgattaaaaagagcttagatccc
aagtggaaccagacgttcctttactcacatgtgcaccgcagggacttcagagagcgcatg
ctggagatcaccgtgtgggaccaaccaagagcacaggaggaggagagtgatttccttgga
gagatcctgattgagcttgagactgcactgctggatgatcaaccacactggtataagctg
cagacccacgatgtgtcctctctccctctgccccaaccctcaccatacctcccgcgtaaa
cacgtccactcagacagctccagcaaaaaactacagagatctcaccgcatcattgagact
gattatgatgatgctattacagttgtttcttcagcagacaggaactccagggagatagag
aggtgcagcactctgacggtacctgagaggcaagcaaccattcagcatcgttctcgctcc
gtctccccacaccgagaggaccagtgcagatcacgctcacgtcacacacacgtccccatg
cagaggagtctggatgaaattcaccagaatcgacataactcccagtcacccatccactac
cataatactcagcaggaacacagatctctagactcagattacgactactccgaggacagc
gagtacctggaaacgcacagatccattcggggcggaagtgccgagtgcctgcacactaac
agtgaccttcagccatcatttgacagagtccgaagtgccagtacgacctgcttgagacca
gaaagcagctttcactctcctgacagagaaaggctgacaggcagtttggatagacctgcc
tgcacaaacactaacaagaaatccgttgacaatgacagagcacatgtgcgtggtggacgt
tcctcccctacagaggctccgttatcagtacgcagggggagacagcttccccagcttcct
gctaagagcagcagtatagagcaagctttggcagtagaagagcgagcacgccagttgagt
cagatccgagtttcttcttatcgtccgggttcctccgccagctcaggccacgatcaagac
atgaagctcaaaaacaaaagagagatgtacaagaggagttgtgataacgtctcagcgagg
tcatcggacagcgatataagcgatgtgtcggccatctcccgggctagcagtgcctcccgc
ctcagcagtgccagctacatgtctgtccaatcagagagaccacacggacggatcagtcgt
caggttcgagcctcagcaggtcgcagcatgttgaagagtaccagcgtgagcggagacatt
aatacgccggaacgcacagacggcagccagtcggacacagcactgagcacagttggcagc
agcagcaaaaagcgccgctcaagccttaacgctcgctttgtggccattgtgggcagcagg
cgtagccgcagcacctcccaacttagccaaacagaggcatccagtaaaaagtcaaaggga
agtgggacgatacagcgaagccaggagacaggcatagctgtcgagctgcaacgcaacatg
agtcgacagccgagccgcgagtccaataatggaagcatggccagctacaattctgaggga
agtccaatctttccagctgtgagggtagaagcacagttcagtgacttcctcgatggactc
ggtccggcccagctggttggccgacaaactctggccactcctgctatcggagatatccag
atcggcatggtgaacaagaaggggaagctggaggtggaggtcatccgtgctcgtggtctc
attcaaaaaccagggtctaaatcgctccccgctccttatgttaaagtctacctgctggaa
aacggggcatatgtggctaaaaagaaaacaaagattgcacggaaaacccttgacccgctg
taccagcaaaccctgcagtttgaagaaagcccacaggggaaggtgttacaagtgattgtc
tggggagactatggacgaatggatcacaaatcctttatgggtgtagcacaaattcttttg
gaggaactggacctggccagcaacgtgattggctggtacaaacttttcccgccctcctct
ttagtggatcccacactggcttcactgactaggcgtgcttcccagtcatctctagaaggt
tcatcggcacccggtgcggttcgatcctag
DBGET
integrated database retrieval system
