Trichomycterus rosablanca: 134329337
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Entry
134329337 CDS
T09921
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134329337 (brat1)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
134329337 (brat1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
134329337
NCBI-ProteinID:
XP_062866641
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Position
15:17047231..17068102
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AA seq
812 aa
AA seq
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MDSDCLSLLPSVCEVLTNPNFVLHDDVSLDKLLDWFKEMLSQNDGQHQPCLLHFLHSVTK
SQAIDPTVFSFSLKLAGLLAGKEHSYTLLKEKGLLTCIFKPDTWCKLELWKNASVRHGWL
QGLFNLLQHQQAVDFFFKNGLIRLVLHLQHDKSLFIASLTCQVVAQILNFTVPPVLSNSV
ESSVSSEFGLVTTEFVNHLTPSLSSEEPTVVLQALKSLALVLSKCKEPPKRMLWKHVVEP
LEVLANGKDDSLTQSIMAVLQAAAGSPILMQQEYRVETIMDILLYARNVKKSVHCARLIL
LMENCPEVLKTKAIDVIILPLMCATESPMQLHVTEKLLEHKAHLANQLVQKATCVFLLIQ
SLTGIEELIRMKSLGNTYIQLISASVILLLKICIHHPFALHPTTSFPHLTGCCNVQKCSL
DVLASLPGYEESINFFQEAFAVLLQYLQCPDLHATVLKKAHQAALKWLSICLPSPALWKT
IKHDLFPLLKKHVCDVRWEVRDSTLEFITQLTATLKGNRHYVEVFHSTDMASVLFTSLSD
TEGYVQASAVAALGEAATVCNNLQEKVVTCLLTILSEETESFPRRAAMKVFVLFVKSSNN
FTASDKFLSSVLLLGGNDFDWEVKVYTLELADVLFERLLNHCPYMQKIYGISEGTCAMQE
LKKLKDLGLFDFLLKSLFDCDRPVAQKACAILLKIRTLIKEKSADHHALTLEVYRHSWSK
EFLYRCKKQQNTEPNCVDYEDKFFYKQTDTEVNNLCLPKEMDVFKILELLDLEEWQHTLL
LSSDHVINSAQSLMEDILFVAKRSEENVVDCY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgactgcctaagcttgcttccatctgtctgtgaagttctgacaaatcctaat
tttgtgctacatgatgatgtctctcttgataaacttcttgattggtttaaagaaatgttg
agccagaatgatgggcagcatcagccatgtctcttgcacttcctacacagtgtgacaaaa
tctcaagcaatagatcctactgtcttttcattctcactcaaacttgctgggcttttggca
ggtaaagagcacagttatactttgctaaaggagaaaggattattgacgtgtatatttaag
cctgatacttggtgtaaactcgagctttggaaaaatgcttcagtgcgccatgggtggtta
cagggactgtttaatttgctgcagcaccaacaagctgtggacttcttctttaagaatggg
ctcatcaggttggttcttcatctgcaacatgacaaaagcctttttattgcctctttgacc
tgtcaggttgtggcacaaattttaaacttcacagttcccccagttttgagcaacagtgtt
gagagttctgtcagtagtgaatttggcttagttacaactgaatttgttaaccatcttact
ccatcattaagctcagaggaaccaactgttgtcctccaagccttaaagtctctagcccta
gttctcagtaagtgtaaagaacctccaaagagaatgctttggaaacatgttgtggaacct
ttggaggtactggcaaatggaaaggatgactcattaacacagtccattatggcagttctt
caagctgctgcagggagtccaattttaatgcaacaagaatatagggtggagactataatg
gacatcttgttatatgcaagaaatgtgaaaaaatctgtgcattgtgccagactaatcttg
ctaatggagaactgccctgaagttttaaaaacgaaagcaattgatgtcatcatccttcct
ctcatgtgtgccactgaatcccctatgcagcttcatgttacagagaaactacttgagcat
aaagcacacttggcgaaccagcttgtccagaaagcaacttgtgtctttttgctcattcaa
agtctgaccggcatagaagaactgatacgcatgaaatcattaggcaacacttacattcaa
ctgatttctgcttctgtgatattgcttctgaaaatatgcattcatcaccccttcgcttta
catccaaccacatcctttcctcatcttactggatgttgcaatgttcaaaagtgcagtctg
gatgtattagccagtcttcctggttatgaagagagcatcaactttttccaggaggctttc
gctgttcttttgcaatatctgcaatgtcctgatttacatgctacggttttaaagaaagca
catcaggccgctcttaaatggctcagcatttgtttgccttcacctgctttgtggaagaca
atcaaacatgaccttttccctttattaaagaaacatgtttgcgacgtacgatgggaagta
agagactctactctagagtttattacacagctcactgctacacttaaaggcaatagacac
tatgtagaagtctttcatagtactgacatggcttcagtgctgtttacctcgttgtcagac
accgagggttacgtccaagcaagtgcagtggctgctcttggagaagcagcaacagtctgt
aacaacctgcaggagaaagtggtgacatgtttgttgactattctctcagaagaaacagag
agttttccacgacgtgcagcaatgaaggtctttgtattatttgtaaaaagctccaacaat
tttactgcctctgacaaattcttgagctcagtgttgttacttggtggaaatgactttgac
tgggaggtgaaagtgtacacactggagttagcagatgtgttgtttgaaagattgttaaat
cactgtccatatatgcagaaaatctatggaatctcagaaggaacctgtgcaatgcaagag
cttaagaagctaaaggatttaggactgtttgattttctgttgaaatctttatttgattgt
gacagacctgttgcccagaaagcctgtgccatcttacttaagataagaaccttgataaag
gaaaaatctgctgaccaccatgctctaactcttgaagtgtacaggcacagttggagtaag
gaatttctttataggtgcaaaaaacagcagaacacagaacccaattgtgtggactatgaa
gacaaattcttttacaagcaaactgacactgaagtcaacaatctttgtttgccaaaagag
atggatgtgtttaagatattggaattattagaccttgaggagtggcaacatactttacta
ctaagtagtgatcatgtgatcaattcagctcagtctctaatggaagacattttatttgtg
gcaaaacggagtgaagaaaatgttgttgactgctattaa
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