Trichomycterus rosablanca: 134329402
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Entry
134329402 CDS
T09921
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134329402 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134329402 (arhgef1a)
Membrane trafficking [BR:
trn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134329402 (arhgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
PHD
PHDvar_NSD
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
134329402
NCBI-ProteinID:
XP_062866728
LinkDB
All DBs
Position
2:7765090..7844379
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AA seq
934 aa
AA seq
DB search
MMASRSEMSRVTDVSKVRQERMKEIALRNKEKERMREREREAREREARYSNGHLFTSLTV
SGTTLCSACNKSITAKEALSCPTCNVTIHNRCRDTLPNCAKMKQRQQKLALMRNSSAYGG
TVTLRTKTHLKERPSSAIYPSDSLRQSLLGSRRGRSSLLLSKSVSTNNIAGTLSDDSPLG
LRRILSQSTDSLNFRSRTMSMESLNDEGEIYFASMLEELEIEGRDFEADSWSMVVDSAYL
QTHRKDVIKRQDVIYELIQTELHHVRTLRIMDGVFRRGMLDEVQLEPGVVHALFPCLEKL
LLIHTRFLTQLLNRRQHCLQPNSTYNFTISRISDLLLQQFSGQSADEMKKTYAEFCSSHL
KAVKLYKELLARDKRLQYFIRRVSRGPLLRRHGFLECILLVTQRITKYPVLVQRILDNTK
DSPEEEAELAQALQLLRDLLCSVDQQVLELERTQRLQEIRSRLDPRSQAKLHSDAVFRPA
ELLRRQLIHEGTLLWKTPSNRLKDVQVLLMTDIVVFLQEKDQRYIFASLDKPAVLSLHNL
LVRDKANQDRGLFLISRECSPPEMYELHAASKEDRNTWKRHIEQAVSRCPSKEEFPLIET
EDKALMRRLKSDIQQKDREVLELLQERVTLFTDLTEVMGGQEVALPQNSRNLFRADTPHA
PRGEQLLTQAITEVDRLTELLLGSSLEISSSCSSNGHHNHTGALVINGQEVIVNGLRDTT
ASQDGNGNQMEDRMSSEEVSQRLVNLSAQLHSLQGAVIRQDSIVELCVHEGVTPACRMGR
SLSRDAASDVGTMGELTLLQRQHSLLQEELVRLRGAESRLKDSEKARVQLERQLRDLKSS
SAVLDEGTGSFQAPPQRKESETDPNTDTPLASQASFEQTDGLQDCSDVDVDAISDDDEDD
VKVSPRSESPRDLQDIPEESESTPEGREIHVSHC
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcgcgttcagaaatgtctcgagttacggatgtttcgaaagttcgtcaggag
aggatgaaggagatcgcactccggaataaagagaaggagaggatgagggagcgagaaagg
gaggcacgggagcgggaggctcgttactccaacggccatctcttcacctccctcaccgtt
agcggcaccacactctgctctgcctgcaacaagagcatcacagctaaagaagctctcagc
tgccccacctgtaatgtcaccatccacaaccgctgcagagataccctacccaactgtgcc
aaaatgaaacagaggcaacagaagctggcactgatgcggaacagctcggcctacggagga
acagtgacactgaggactaagacacatttaaaggaacggccaagctcagctatctacccc
tctgacagccttcgccagtcactgcttggctccaggcgtggccgctcctccctcctgctg
tccaaaagtgtatccaccaataacattgcagggactctgagtgatgactctcccctgggg
ctgcgcaggatcttgtctcaatccacagactccctaaacttcagaagcagaaccatgtct
atggaatcactcaatgatgagggtgagatatactttgcctcaatgctggaggagctagag
attgaaggacgggactttgaggcagactcctggagcatggttgtggactccgcttaccta
cagacccaccgaaaagacgtgatcaagagacaggacgtcatctatgaactgatccagact
gagctgcatcatgtgcgcacgctgcgcatcatggatggcgtttttcgacgtggaatgctg
gacgaggtgcagctggagccgggggtcgttcacgcacttttcccctgccttgagaagctg
ctcttgatacacactcgcttcctcacacagctgctcaaccgccgtcagcactgtctgcag
cccaacagcacctacaacttcaccatcagccgcatcagcgatctcctcctgcagcagttc
tcaggtcaatctgcagacgagatgaagaaaacctatgctgaattttgcagttctcactta
aaagctgttaagctgtacaaagagctgctggccagagacaagagactgcagtactttata
cggagggtaagtcgaggacctctgttacggcgacacggttttctggagtgcattttgctg
gtcactcagcgcatcacgaaatatcccgtactggtgcagcgtatcctcgacaacacaaag
gacagtccagaggaggaggcagagctggcacaggctcttcagctgctgcgggatttgctg
tgcagcgtggaccagcaagtcctggagttggaacggacacagcggctgcaggagatccgc
tccagactggatccacgctctcaggccaaactgcactcggatgccgtgtttagacccgca
gagttactgcgcagacagctcatccacgagggtacactgctgtggaaaacccccagcaac
agactcaaggatgttcaagttctgctcatgactgacatagtagtgttcctgcaggagaaa
gatcagagatacatctttgccagtctggataaacctgcagtactctcactacacaatctc
ctggtgagggacaaagccaatcaggacagagggttgttcctcatcagcagggagtgcagc
ccaccagagatgtacgagctacacgcagcttccaaagaggaccgaaacacctggaaacgg
cacattgagcaagctgtcagcagatgtccctccaaagaagaatttccactaatcgagaca
gaagataaggcgctgatgcggagactgaaatctgatatccagcagaaggacagggaggtg
cttgaactgctgcaggagcgtgtcacacttttcactgatcttactgaggttatgggaggc
caagaagttgcactgccacaaaactccaggaacctgttcagagcagacacaccacatgcc
ccaagaggggaacagctgcttactcaggctattactgaagttgacagactgaccgagctg
ttactgggatccagtttggaaatctcttcatcctgtagttccaacggccaccacaatcac
acaggggcgctagtgataaatggacaggaggtgatagtcaatggtttacgggataccaca
gcctctcaggatgggaatggaaatcagatggaagacaggatgtcaagtgaggaggtgtct
cagcggctggtgaacctcagtgctcagctccattctctgcagggggcggtcattcggcag
gactccatcgtagagttgtgtgtgcacgagggtgtcacgcccgcgtgccgaatgggccgg
tctctctctcgtgatgcagccagcgacgtgggcacgatgggtgaactgacactgctccag
cgccaacacagtctcctgcaggaggaactcgttcggcttaggggagccgaaagcaggctt
aaggacagcgagaaggcacgggtccagcttgagaggcagctaagagacctcaagtccagt
agcgctgtccttgacgaaggaacaggaagcttccaggctccaccccagcgcaaagaaagt
gaaactgacccaaacactgacactccactggccagccaggcatcgtttgagcaaacagac
ggtctacaggactgcagtgatgtagacgtagatgcgatctcagacgatgatgaggatgat
gttaaggtgtctccacgctcagagagccctagagatctgcaagacattccagaggagagc
gagtcaactccggaggggcgagagatacacgtctcacattgctaa
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