Trichomycterus rosablanca: 134329556
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Entry
134329556 CDS
T09921
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134329556 (sorcs3a)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Others
Others
134329556 (sorcs3a)
Endosome - Lysosome transport
134329556 (sorcs3a)
Endosome - Golgi transport
134329556 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
134329556
NCBI-ProteinID:
XP_062866910
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Position
15:complement(7316295..7562419)
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AA seq
1133 aa
AA seq
DB search
MDGVELTGKAGEFGSGAQNSKAESESAGFEKVRKKETDAPFTRRKRSASGRGEFGLNARS
SDSPESSESLLLDGQKLRRNREDAKVPNSRSEEPRASSSTFALAGDYAHNHASVYWTGQN
SSVILILTKLYDFHLGSVTESSLWRSTDYGTTYERLNDKVGVKTVLSYLYVCPTNPRKVM
VLTDPEFESSVLISSDEGANYQKYRLSFFVLSLLFHPSQEDWALAYSHDQKLYSSFDFGR
KWQLVHERVTPNRFYWSVSGLDKENDLVHMEAYNPDGQCRYMTCRAQACFESSRTYPFPG
YIEPNSLVVQDSYIVIQVTLAGRASYYVSYLRETFMRIKLPKYSLPKDMHILSTDQGQVF
AAVQEWNQNDTYNLYISDPRGIYFTLALENVKTTRGLGGNSMIDLYEVAGIKGMLIANRK
VENQVKTYITYNKGRDWRLLQAPATDLEGNEIYCVLPFCSLHLQLQMSENPYVSGNIMTK
KTVPGVIVATGNIGSELSYNNVGMFISSDAGNTWRQIFDEEHNIWFLDRGGTLLAVKQPT
VPTRHVWISIDEGRQWTHHSFSATPLFVDGVLAESGMEKQILTFFGHFSDRSEWQLIKID
YKSLFTKRCTEGDYQTWHLHNQGEPCVMGQKQIFLKRRPGNYCMIGKDFSRILSSEPCIC
RAHDFECDYGFERRADGNCLTAFWFNPVTVSRGCSHGQNYLNSTGYRKVAANNCTKGVKE
LYTARKQQCPNRPPRGLHLTTRDNTLTAKLGTNVTFLVQLEEGDSLRTNIQLDFGDGIAV
SYSNLSWTEEGIRYVYRSTGIFRVTAVAENSLGSDTNVLYLHIISSVEQVQLLSPFVVIK
NKEVNLTAVVWPSHSRTLTYFWWLGNNTEPIITLEGSISYTFSVEGIHTVTVQVSSSNSV
LQDTKSIVVQEFFKSLLLSFSPNLDEANPDIPEWRQDVSRIIKKAVLQVADIPAEQLLVA
VFPGIPTAAELFLLPSKNQTDSRKGNEEDLGQISEILVSAMNQNLVEFELKPGSGVVVYI
TQLTLAPLVDSIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEM
IGTVEQNDTTPKIKLSEFSSPKELMDKDLEVRVKRGMINTCESTREIPNCTSV
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatggagttgagttaactgggaaagctggggagttcgggagcggcgcgcaaaactcc
aaagcggagtcggagagcgcggggtttgagaaagtgcgcaaaaaagaaacagacgcgcct
tttacaaggagaaaaagaagcgcatcgggtcgtggagaatttggcttaaatgcaaggagt
tcggattcccctgagtcctcagaatccctgctgctggacgggcagaaactaaggcgcaac
cgcgaggatgcaaaagtgcccaattccagatcagaagagccgagagcgagcagcagcact
ttcgccttggctggagactacgcgcataaccatgcgtctgtttactggaccggtcagaac
agcagcgtgattttgattttgaccaagctgtatgacttccacttgggcagtgtgacagag
agttccctatggagatcaacagattatggcaccacctatgaaagactgaatgacaaagtt
ggagtgaagactgtactgagttacctgtacgtctgtcccaccaatccaagaaaagtgatg
gtcttgacggacccagaatttgaaagcagtgtcctcatcagctcggatgaaggtgccaac
taccagaaataccgtctcagtttctttgtcttgagtctgcttttccacccttcccaggag
gactgggctctggcctacagccacgaccaaaagctctacagctcatttgattttggacga
aaatggcagcttgttcacgagagagtgacccccaaccgtttttactggtctgtaagtggc
ttggataaagagaacgatctggttcacatggaggcgtacaatcctgatggacaatgtcgg
tacatgacatgtagagctcaggcttgttttgaatccagcaggacatatccgttccccggc
tacatcgagcccaactcgctggtggttcaggatagctacatagtcattcaggtcaccctg
gctgggagagcatcttactatgtgtcttacctgagggaaacttttatgcgcatcaagcta
cctaaatattccctgccaaaagacatgcacattctgagcacagatcagggtcaggttttt
gctgccgtccaagaatggaaccagaacgacacctacaacttgtacatttccgatccacgc
ggcatttactttacgctggctctggaaaatgtcaaaaccacccgaggacttgggggcaac
agtatgattgacctgtatgaggttgcaggaatcaaaggcatgctgatcgcgaatagaaaa
gtggagaatcaggtgaagacctacatcacgtacaacaagggcagagactggaggctgctg
caagcgcctgctacggaccttgaaggaaatgagatttactgcgtgctgccattttgctcg
ctgcacctacaactccaaatgtcagaaaacccctacgtttctgggaacataatgactaaa
aagactgtgccaggagtgatcgttgctacaggcaatattggctcagaactctcctacaat
aatgtaggcatgtttatatcatcagatgctggaaacacgtggagacagatatttgatgag
gagcacaacatttggttcctggatagaggaggaactctacttgcagttaagcagcctaca
gttcccacaagacatgtatggattagcatcgatgaggggagacagtggacacatcatagt
ttttcagccacacccttgtttgtggacggtgttctggctgaatcaggcatggagaaacag
atactgacattttttggacacttcagtgatcggtctgagtggcagttgatcaaaatcgac
tacaagtctctgtttaccaaacgctgcacagaaggagactaccaaacatggcacttgcat
aatcagggtgagccatgtgtaatgggccagaagcagatcttcctcaagcgccgcccaggc
aactactgcatgatcggaaaggatttttctaggatcttgtcttctgagccctgtatctgc
agagctcatgactttgagtgtgattacggctttgagcgaagagcagatgggaactgtttg
actgcattctggttcaacccagtcactgtgtctcggggctgcagtcatggccagaactac
ctcaacagcacagggtatcgcaaagtagcagcaaataactgcaccaagggcgtgaaggaa
ttgtacactgccagaaagcagcagtgtcccaatcgtcccccacgaggactgcacctgaca
acccgggataacacacttacagccaagctgggcaccaatgtcacctttctggtacagctg
gaagagggggattcgctgaggacaaatatccagttggactttggggatggaatagcagtg
tcctactcgaaccttagctggacagaggaagggatcagatacgtgtatcgcagcactgga
atcttccgggtcactgcggtagctgagaacagtctaggatctgataccaacgtgctgtac
ctacacatcatatcttcagtcgagcaggttcagttgctgtctccgttcgtcgtcattaag
aacaaggaggtgaacttgactgcagtggtctggccttcacactctcgaactctcacctac
ttctggtggctggggaacaacacagagccgataataactttagaaggcagtatatcatac
acgttctcagtggaggggatacacacggttacggtgcaggtgtcatcctcaaactccgtc
cttcaggacaccaagtccattgttgtgcaagaattcttcaaatccctgcttttatctttt
tccccgaatcttgatgaggccaaccctgacattccggagtggaggcaggatgtaagcagg
ataattaaaaaggctgtgctgcaagttgctgatattcctgctgagcaactccttgtggca
gtatttccaggaattcctacagctgctgaactcttcttacttcccagcaaaaaccagaca
gacagcagaaaaggaaatgaggaggatttgggccagatctccgaaatcctggttagtgca
atgaaccagaatttggtcgaatttgagctgaaacctggatctggagtcgtcgtgtacatc
acacagttaactttagctccactggtggactccattcccagacacagcagttctgctatg
ctgatgcttctctcagtggtgttcctgggcttagctgtctttcttatctacaaattcaaa
agaaaaattccctggattaatatatatgctgaggtgaaccatgagaaagagcaggagatg
atcggcacagtggaacagaatgacaccacacccaaaattaagctcagtgaattttccagc
cccaaggagctgatggacaaggacttggaagttcgtgttaaacgtggaatgatcaatacc
tgtgaaagcacaagagagatccccaactgtacaagtgtctaa
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