Trichomycterus rosablanca: 134329605
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Entry
134329605 CDS
T09921
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134329605
Membrane trafficking [BR:
trn04131
]
Protein recycling
Others
Others
134329605
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
134329605
NCBI-ProteinID:
XP_062866953
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All DBs
Position
15:7023439..7254077
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AA seq
1087 aa
AA seq
DB search
MLSDAGISCRFCQVMRNVHPQQLLVNMDSFDSGPGELHGDIFTGEPECAFQTDSKCPSFT
QPERSTNEQVSHGSNDAKAERVRRGAEGPQVDLKPVRSKKSRSKVRAVRAESRTGKDELQ
LTSSTFALSGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGSVTESSLWRSTDYGTTYQK
LNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVENSLLISTDEGATYQKYRLGFYVLSLLF
HPEQEDWILAYSHDQKLYSSVEFGRRWQLVHEMVAPNRFYWSKTGLDKEPGMIHLETSIS
ETQALYVTCRLQNCTDANKGKPFPGYIDPNSLVVEDEYVFVQVSTGGRPIYYVSSRRDLF
TPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSEAGGVFYTLALENVMSSM
GPEGNVMIDLYEVAGIKGMFLANKKWGDQVKTYITYNKGRDWRLLQAPSTDLRGNSIHCV
LPYCSLHLHLHVSANPYTSGNIASKESAPGIIVASGSIGAELTSSNVTIFITSDAGNTWR
QIFDEEYSILYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWNKYSFTSSPLFVDGLLGEP
GEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYR
KLKPMARCVMGKTHYVTVISDPCDCTESDFECDYGYERRTDGRCTPAFWFHPSSMSRSCL
TGHTFLNSTGYRKVVSNNCTGGVVDLYMAHRRPCPSQAPKGLHLVTSEGKLTAMLGHNVT
FLVFLEQGDGSRTSITLDFGDGTAITYSNVSSIEDGIKHIYKSVGIYRVTATAENSLGFE
TAVLFLHVTCQLEYIHLSAPFVAVKNKEVNLTVVLWPSQVGTVTYIWWFGNNSEPIITLE
GSVAFTFPREGINVVTVQVAAGNTIHQDRKTVAVHEYFRSHLLAFSSNLDEHNPDVAEWR
LDISRVIKNSIIQATGVHPEQLLVTVLPGLPTTAEFFLLPDKELTEGKADKTATHLEHLS
DLVLNALNQNQVQFTLRPGVQITVYAAHLSAAPLVDTSENHSSSAMLMLLSVVVLGLAVF
LIYKFKR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgatgcggggataagttgcaggttttgtcaggtgatgagaaatgtgcacccg
cagcagctgctggttaacatggactctttcgattctggacctggagaacttcatggagac
atctttaccggagagcccgagtgcgcgttccaaaccgattccaagtgtccgagtttcacg
cagcccgaacggagtacaaacgaacaagtttcccacggttcgaacgatgccaaagctgag
cgggtgcgcaggggtgcagaaggacctcaggtcgatttaaaacctgttagaagtaagaag
tcgcgcagtaaagtgcgggcggtgcgcgctgaaagcagaaccggtaaagacgagctgcag
ctcaccagctccacgttcgctctgagcggagattcagctcacaaccaagccatggtgcac
tggtctggccagaacagcagtgtaattctcatgctgaccaagctgtatgattttaatctg
ggtagtgtgactgagagctccttgtggaggtcgaccgactatggaaccacttaccagaag
cttaatgagaaagttggagtgaaaaccatactgagttacttgtacgtcagcccgaataac
aaaagaaagatcatgctgctgacagatccggaggtggagaacagtcttctgatcagcacg
gatgaaggtgcgacctatcagaaataccgtctcggattctacgtgctcagcctgcttttc
caccccgagcaggaggactggattctcgcctacagccacgatcagaagctctacagctcg
gtggaatttggacgacggtggcagctggttcacgaaatggtcgcaccaaatcgattttac
tggtctaaaacaggtctggataaagaacccgggatgattcatctagagaccagcatttca
gaaacacaggctctgtacgtcacctgcaggctacagaactgcactgatgccaacaagggc
aaaccttttcccggctacatcgaccccaattccctggtggtggaggacgagtacgtgttt
gtgcaggtgtcaacaggcggccggccaatctactacgtgtcatccagaagagatctgttc
acacccatgaagttgcccaagtacacacttccaaaggacctgcatgtaatcagcacagat
gagaaccgtgtggtggcagcggttcaggagtggaatcagaatgacacctataacctgtac
gtctcagaagctggaggagtgttttatacgctggccctggagaacgtcatgagcagtatg
ggacccgagggcaacgtcatgattgacctgtatgaggttgcaggaattaaggggatgttc
ttagccaataagaaatggggtgatcaggtaaagacatacattacgtacaacaaaggccgg
gactggagacttctgcaggcgccttctactgatctacgaggaaacagcatccactgtgta
ttgccgtactgctccctgcatttgcacctacacgtgtcagctaacccatatacatctgga
aacatcgccagcaaagagtcagcgcccggaatcatagtggcatcaggttctataggagca
gagttaactagcagtaacgttaccatattcatcacctctgatgctgggaacacatggagg
cagatattcgatgaggaatacagcatcttgtatctggaccaaggaggagcactggtggca
atccgacacacccctctccccatcagacacctatggttgagttttgatgagggacgggtg
tggaataaatacagctttacatcctcaccgctgtttgtggatggacttcttggagagcct
ggggaggagacgttaatcatgacaattttcggccacgtcagtcatcgttccgaatggcag
ctggtgaaaatcgacttcaggtctatttttaacaggcgatgcactgaagcagactatcag
acctggcacctccataaccagggtgagccttgtctcatgggggtgaagaggatttatcgg
aagctaaagccaatggccaggtgtgttatgggtaaaacccactatgtgactgtgatttcg
gatccctgtgactgcaccgaatccgattttgaatgtgattatggctatgaacgaagaaca
gatggacggtgtacacctgcattttggtttcacccctcttccatgtccaggagctgcctc
acaggtcacacgttcctcaacagtactggatacagaaaggtggtgtctaataactgcaca
ggcggtgttgtggatctctacatggcccacagacgaccttgtcccagtcaggctcctaaa
ggtctacacctggtcactagtgagggcaaactaacagccatgctgggccacaatgtcacc
tttcttgttttcttagagcagggcgatggatcaaggacgagcattacgctggactttggt
gacggtactgcgattacctactccaacgtgagctctatagaggatgggatcaagcacatc
tacaagagcgtggggatctatcgtgtgaccgctacagctgagaacagccttgggtttgag
acggctgttcttttcttacatgttacatgtcagctggagtatatccatctttctgctccc
tttgtggcagtgaaaaataaagaagtcaatctgacggtggttttgtggccgagccaagtg
ggaactgtcacctatatctggtggtttgggaacaactcggagccaataatcacactggag
ggaagcgtggcgttcactttccctcgggagggaataaacgtcgtgactgtgcaggtggct
gctggaaacacgatccaccaagataggaaaactgttgctgtccatgaatattttaggtcc
catcttttggcgttttcctctaatctggatgaacacaaccctgatgtggcagaatggagg
ctggatattagtagagtcatcaaaaactctataattcaggcaaccggagtgcatccagag
cagctgctggtcacagtattgccaggactgccaacgactgccgaattcttccttctacct
gacaaagagctgacagagggaaaagcagacaaaacagccacacatttagagcatctttca
gatttagttctgaatgctctaaaccagaaccaggtgcagttcacattaagaccaggagtt
cagatcacagtctacgctgcacatttatctgcagcaccgctggtggacaccagtgagaat
cacagcagctcggcaatgctaatgcttctgtcagtggtggtgctgggtttagcggtgttc
ctcatctataaatttaaaaggtaa
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