KEGG   Trichomycterus rosablanca: 134329663
Entry
134329663         CDS       T09921                                 
Symbol
u2af2b
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2b isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
trn  Trichomycterus rosablanca
Pathway
trn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134329663 (u2af2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:trn03041]
    134329663 (u2af2b)
Spliceosome [BR:trn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    134329663 (u2af2b)
 Complex B
    134329663 (u2af2b)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer DUF2457
Other DBs
NCBI-GeneID: 134329663
NCBI-ProteinID: XP_062867012
LinkDB
Position
2:complement(8938806..8955297)
AA seq 468 aa
MSEFDEFERQLSENKQGDGVNGHERDKENRHRRRSGSRSRSRERKRRSRERRSRERRSSS
KDRRPRRSRSPPPRERKKKIKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPE
GLTVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLIQAPGNPVLA
VQINQDKNFAFLELRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPA
SFPGVVSTVVPDSAHKLFIGGLPNYLSDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF
CEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGAKNATMASINETPVTLQVPGLMNSSM
NQMGGIPTEVLCLMNMVSPEELLDDDEYEEIVEDVREECSKYGQVKSIEIPRPVDGLEIP
GTGKIFVEFTSLYDSQKAMQSLTGRKFANRVVVTKYCDPDAYHRRDFG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtcggagttcgacgaatttgagaggcaactgagtgaaaacaaacaaggtgacggtgtt
aacggccatgagcgggataaagagaacaggcaccggcggcggagcggatcgcgtagccgc
agccgggaaagaaagaggaggagcagggagaggagaagccgggagcgacgcagcagcagc
aaagatcgcagacctagacgcagtcgctcaccaccacctagggagaggaagaagaaaatc
aaaaagtactgggatgttcctcctccaggctttgagcacattacacccatgcagtacaag
gccatgcaggccgctggtcagattcctgccacagccctgttgcccactatgactccagag
ggactgactgttacacctactccggtgccagtagtgggaagccagatgacccgtcaggct
agaagactgtacgtgggcaacatcccatttggcatcacagaggaatccatgatggacttc
ttcaatgcacaaatgagactcggaggtcttattcaggctccgggaaacccagtccttgct
gtgcagatcaaccaggataagaactttgcttttcttgagttgcgctcagtggatgagact
acacaggccatggcttttgatggcatcatattccagggccagagtttgaagatccgccgg
ccacatgattaccagcctttgccaggcatgagcgagaaccccagcgtgtatgttccagcc
tcttttccaggtgtggtgtctactgtagtcccggactctgctcacaagcttttcatcgga
ggcttgcccaactatctcagtgatgatcaggttaaggaactactgacatcctttggcccc
ttgaaagcattcaaccttgtgaaagacagtgctacaggcctctccaagggctatgctttc
tgtgaatatgttgatgtcaatctcaacgatcaggctattgcaggactgaatggcatgcag
ttaggagataagaagctcctggttcagagagcaagtgttggagccaagaatgccactatg
gcaagcataaacgagacaccagtgacactgcaggtaccaggcctgatgaacagctctatg
aatcagatgggtggaatccccaccgaggtgctgtgcctgatgaacatggtatctccagaa
gagctgctggatgatgacgagtatgaggaaattgtggaggatgtcagagaagagtgttcc
aaatatggtcaggttaagagcatcgagatcccacgacctgtcgatggccttgagatccct
ggaactggcaagatctttgtggaattcacatcattatatgactcccagaaggccatgcag
tctttaaccggcaggaagtttgccaacagagtggtggtcaccaaatactgcgaccccgat
gcctaccaccgccgtgacttcggctag

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