Entry |
|
Symbol |
u2af2b
|
Name |
(RefSeq) U2 small nuclear RNA auxiliary factor 2b isoform X1
|
KO |
K12837 | splicing factor U2AF 65 kDa subunit |
|
Organism |
trn Trichomycterus rosablanca
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:trn00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134329663 (u2af2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:trn03041]
134329663 (u2af2b)
Spliceosome [BR:trn03041]
Complex A
U2 snRNP components
U2 related factors
134329663 (u2af2b)
Complex B
134329663 (u2af2b)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:complement(8938806..8955297)
|
AA seq |
468 aa
MSEFDEFERQLSENKQGDGVNGHERDKENRHRRRSGSRSRSRERKRRSRERRSRERRSSS
KDRRPRRSRSPPPRERKKKIKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPE
GLTVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLIQAPGNPVLA
VQINQDKNFAFLELRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPA
SFPGVVSTVVPDSAHKLFIGGLPNYLSDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF
CEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGAKNATMASINETPVTLQVPGLMNSSM
NQMGGIPTEVLCLMNMVSPEELLDDDEYEEIVEDVREECSKYGQVKSIEIPRPVDGLEIP
GTGKIFVEFTSLYDSQKAMQSLTGRKFANRVVVTKYCDPDAYHRRDFG |
NT seq |
1407 nt +upstreamnt +downstreamnt
atgtcggagttcgacgaatttgagaggcaactgagtgaaaacaaacaaggtgacggtgtt
aacggccatgagcgggataaagagaacaggcaccggcggcggagcggatcgcgtagccgc
agccgggaaagaaagaggaggagcagggagaggagaagccgggagcgacgcagcagcagc
aaagatcgcagacctagacgcagtcgctcaccaccacctagggagaggaagaagaaaatc
aaaaagtactgggatgttcctcctccaggctttgagcacattacacccatgcagtacaag
gccatgcaggccgctggtcagattcctgccacagccctgttgcccactatgactccagag
ggactgactgttacacctactccggtgccagtagtgggaagccagatgacccgtcaggct
agaagactgtacgtgggcaacatcccatttggcatcacagaggaatccatgatggacttc
ttcaatgcacaaatgagactcggaggtcttattcaggctccgggaaacccagtccttgct
gtgcagatcaaccaggataagaactttgcttttcttgagttgcgctcagtggatgagact
acacaggccatggcttttgatggcatcatattccagggccagagtttgaagatccgccgg
ccacatgattaccagcctttgccaggcatgagcgagaaccccagcgtgtatgttccagcc
tcttttccaggtgtggtgtctactgtagtcccggactctgctcacaagcttttcatcgga
ggcttgcccaactatctcagtgatgatcaggttaaggaactactgacatcctttggcccc
ttgaaagcattcaaccttgtgaaagacagtgctacaggcctctccaagggctatgctttc
tgtgaatatgttgatgtcaatctcaacgatcaggctattgcaggactgaatggcatgcag
ttaggagataagaagctcctggttcagagagcaagtgttggagccaagaatgccactatg
gcaagcataaacgagacaccagtgacactgcaggtaccaggcctgatgaacagctctatg
aatcagatgggtggaatccccaccgaggtgctgtgcctgatgaacatggtatctccagaa
gagctgctggatgatgacgagtatgaggaaattgtggaggatgtcagagaagagtgttcc
aaatatggtcaggttaagagcatcgagatcccacgacctgtcgatggccttgagatccct
ggaactggcaagatctttgtggaattcacatcattatatgactcccagaaggccatgcag
tctttaaccggcaggaagtttgccaacagagtggtggtcaccaaatactgcgaccccgat
gcctaccaccgccgtgacttcggctag |