Trichomycterus rosablanca: 134330099
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Entry
134330099 CDS
T09921
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
trn
Trichomycterus rosablanca
Pathway
trn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134330099 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134330099 (myo5b)
04131 Membrane trafficking [BR:
trn04131
]
134330099 (myo5b)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134330099 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134330099 (myo5b)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134330099 (myo5b)
mRNA cycle factors
P-body specific factors
134330099 (myo5b)
Membrane trafficking [BR:
trn04131
]
Others
Actin-binding proteins
Myosins
134330099 (myo5b)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134330099 (myo5b)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
134330099 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
Myosin_N
MYO6_lever
AAA_22
Ac76
AAA_16
nSTAND3
IQ_SCN5A_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
134330099
NCBI-ProteinID:
XP_062867127
LinkDB
All DBs
Position
16:27363246..27438136
Genome browser
AA seq
1802 aa
AA seq
DB search
MSVNELYTRYTRVWIPDPEEVWKPAEIIKDYKLGDSVLNIKLEDESTLAYPVGPKDNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIESNHIYTYCGIVLVAINPYEQLPIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMGRDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSANDTNVEEKVLASSPIMESIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASASLPEFNELQLTSAEDFTYTSLGENIFIQGVN
DAADLQKTREAFTMLGVKENYQMSIFKIMASILHLGNVIIVSERDGESCHINRNDPHLIH
FCELLGVEREQMESWLCRRKLVTATETYVKNMSCAQATNARDALAKHIYAHLFDWIVEHI
NKALHTATKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMR
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYSRHLSSEHFVK
PRMSNTSFIIVHFADRVEYQCDCFLEKNRDTVYEEQINILKASKFQLVADLFREGKDAAA
PAAGGKSSKINVRPAKPMPKGHNREHRKTVGTQFRSSLHLLMETLNATTPHYVRCIKPND
VKESFVFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFYNRYRVLMTKKDASASDKK
LVCRNLLESLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADRFRYACIKMQKTVRGWLQRR
RYQKIRKSAILLQRYGRGFMARRYAEMLRLTRAALICQKQYRMVRVRRAYLTIRKATITI
QAHTRGWFTRRLYQEYLRHHKASIIQRAVRRWLLRRKFLRARSAAIVIQCAYRRVLAKRQ
FKKLKTEARSAEHMKNLNVGMENKIVQLHRKMVDQTKEYKMQSDKLSVANTDLVTKMDKL
QKELNTARNDKGEKTQLSSLQDELEKLRAELQEVHSQKKKLDEEHSTEKLGLEQRVQELE
KENLMLKEEKEEMNQRIQRYSQSSKGKEGNVTQLQIELDDERLRYQNLLKEFSRLEQRYE
NLQEEVSLARFTPGHRRTTSDLSSLGSDSALTSISMSEVGDTEDALQQVEDMGLEKAAMD
ISVFMKLQKRVRELEQERKKLQTNLEKMEDLNKRKVNDPKSPTSEDVNADLAYNSLKRQE
LETENKKLKNDLNELRKALADQASENSTSNEQQDSFNVLLSQLKAATEELDVRKEEVLML
KTQIVSSTKPSESSNHINSNDWDSGKKPVGKEEVAESKKLLEAQLQSQTRKHHDELEALH
TQIEVMREDLEKKQEVLNHFNTLPPETLVEYSIQQEITRLTNDNLDLKEINEKLEKNEKK
LRKQLKIYTSKVKELEASQAAMSRPRLSRQVTVQRKEKDFEGMLEYYKEDEPLLVRSLIA
DMKPQAVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAVKKVLKRNNDDFEMA
SFWLANTSRLLHCLKQYSGEESFMTQNAPKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLI
KIAEATLQPMIVSAMLESRSLTGVKPLGYRKRSASVDCESGGPPGYTLEALIKQLGEFHL
IMSEHGLDPEVAQQVVRQLFYCIDAITLNNMLLRKDMCSWSTGMQLRYNITQMEEWLRDK
NMHQNNIITTIEPIIQVSQLLQINKKTSQDAEAICSRCTALTAQQIVKILNLYTPENEFE
ERVTVSFIREIQGLLQGRVENNQLLMDTKHTFPVLFPYSPSALTLDSMHIPASLNLHFLS
RV
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaacgagctttacacccggtacacccgggtttggatccccgatccagaggag
gtgtggaaacctgctgagattataaaagactacaagttaggcgactctgtcctgaacatt
aaactagaagatgaatcgacgttagcatatccagtcggtcccaaggacaatccgctccca
ttcctgaggaaccctgatattttagtgggagaaaatgatctcacagccctcagctacctg
cacgaacctgccgtcctgcacaacctcaaagtccgtttcatcgagtccaaccacatttac
acctactgtggtatcgtactggtggcgattaatccatacgagcagttacccatctatggc
gaggaggtcatcaatgcctacagcgggcaaaacatgggtgatatggacccgcatatattt
gctgtggcagaggaggcttataagcagatgggcagagatgagaagaatcagtcgatcatt
gtgagtggagagtcaggagctgggaagacggtgtccgccaaatacgccatgcgctacttc
gccactgtgggagggtcagccaacgacacaaacgtcgaagagaaagttctggcctccagc
cccatcatggagtctatcgggaacgcgaagacaacacgtaacgacaacagcagccgtttc
ggaaagtacattcagatcggcttcgacaagaggtatcacatcatcggcgccaacatgcgg
acgtatttactagagaagtccagagtagtgtttcaggctgaggaggagaggaactaccac
atcttctaccagctctgtgcctccgcctcgctccccgagttcaacgaattacagctgacc
agtgcagaagacttcacgtacacgtctctgggtgagaacattttcattcaaggagtaaac
gatgctgcagatttacaaaagaccagggaagcctttacaatgctgggggtcaaagaaaat
tatcagatgagcatctttaagatcatggcgtctatcctgcaccttggaaatgtgatcatt
gtttctgagagagatggagagtcgtgtcatattaatagaaacgaccctcacctgatccat
ttctgtgaactgctgggggtggagcgggagcagatggagagctggctttgccgcaggaaa
ctggtgaccgcgaccgagacctacgttaaaaacatgtcctgcgcccaggcaaccaacgct
cgtgacgccctggccaagcacatctacgctcatctgttcgactggatagtggagcacatc
aacaaagccctgcacaccgccaccaaacaacattccttcatcggcgtgctggatatttat
ggatttgaaacgtttgagatcaacagctttgagcaattctgcatcaactacgccaatgaa
aaacttcagcaacagtttaactctcatgtatttaaactggagcaggaggaatacatgagg
gaacagatcccttggacacttattgacttttacgacaaccagccctgcattgacctaatc
gaggccaagctcggtattctggacctgctggatgaggaatgcaaggtacctaaaggaaca
gatcagaactgggctcagaagctctacagccgacacctgagcagcgagcattttgtgaag
cccaggatgtccaacacttcattcatcatcgtccactttgccgacagagtggagtatcag
tgtgactgctttctggaaaagaatcgagacaccgtgtatgaagaacagatcaacatcctg
aaggccagcaagttccagctggtggcagatcttttccgagagggaaaagacgctgcggct
ccagccgccggcggcaaaagttccaagattaacgtgcgtccggctaagcccatgcctaag
ggccacaatcgtgagcaccgcaagactgtaggcacacagtttcggagttcattacatctg
ctaatggagaccctgaatgcgaccactcctcactatgtgcgctgcattaagcccaatgac
gttaaagaatccttcgttttcgattctaagagggcagtccagcagttgcgtgcatgtggt
gttctggagaccatccgcatcagtgctgcaggatatccatccaggtggacgtacccagat
ttctataacagataccgtgtgctcatgacgaagaaggatgcgagcgccagcgataagaag
ctggtgtgcaggaacctgctggagagtttggtcaaggatccagacaagttccagttcgga
aagacgaagatcttcttcagagccggacaggtggcgtacctagagaagctccgggccgac
aggttccgctacgcctgcataaagatgcagaaaacggtgcgaggctggctgcagaggaga
cgttaccagaagatccgcaaatctgccatcctgctccagagatacgggcgtggcttcatg
gcacgcagatatgctgagatgctgcgtttgactcgagcagctctgatctgtcagaagcag
tacaggatggtgcgggtacgacgtgcgtatctaacaatccgtaaagccaccatcaccatc
caggcccacacgcggggctggtttacacgccgcctgtaccaggagtacttgcgtcaccac
aaagccagtatcatccagagagcagtacgtcgctggctactgaggagaaagttcctacgt
gcccgaagtgcagcaatcgttatccagtgcgcctaccggcgtgtgctggccaagcggcag
ttcaaaaagctgaagaccgaggcccgttcagccgagcacatgaagaatctcaacgtcggc
atggagaacaagatcgtacaacttcacagaaaaatggttgatcagacgaaagagtacaag
atgcagagtgataagttatcggttgccaacactgatctggtaacaaagatggacaaactg
cagaaagagctgaacacggcgcgcaacgataagggggagaagactcagctgagctcactg
caggacgagctggagaaactgagggcagagcttcaggaggtccactcccagaagaagaag
cttgatgaggagcacagcaccgagaagctcgggctggaacagcgagtccaggagctggag
aaagaaaacctgatgctaaaggaggaaaaagaggagatgaatcagcgaatccagcgctat
tctcaaagctccaaaggtaaggaaggcaacgtgactcagctgcagatcgagctggacgat
gagaggctgcgctatcagaacctgctgaaggagttttccagactggagcagagatatgaa
aacctgcaggaggaagtgtctctggccagatttaccccaggccatcgaagaacaacatca
gatctaagcagcctgggctctgactcggctctaacctccatctccatgtctgaagtggga
gacacagaggacgccttacagcaggtggaggacatgggcctggagaaagcagccatggac
atcagtgtgttcatgaagctgcagaagagagtgcgagagctggagcaggagaggaagaaa
ctccagactaacctggagaagatggaggatttgaacaagcgcaaggtgaacgatccaaag
agcccgacgtcagaggacgtgaatgcagatttggcctacaacagccttaagaggcaagag
ctggagacagagaacaagaagctgaagaacgacttgaatgaactgaggaaagctttagcc
gatcaggcctcggaaaactccacatctaatgaacagcaggacagtttcaacgtgctgctc
agtcagctcaaagccgccacagaggagctggatgtgcgcaaggaggaagtgttaatgctg
aaaacccagatcgtcagcagtacgaagccctcggagagctccaaccacattaactctaat
gactgggacagcggcaaaaagcctgtagggaaggaggaggttgcggagtccaagaagctg
ctggaggcacagctacagtcccagacccggaaacaccacgacgagctggaggctctgcac
actcagatcgaggtgatgagggaagacctggagaagaagcaggaggtgctgaatcacttt
aacaccctcccacccgagacactcgtggaatacagcatccagcaggaaatcacccgcctc
accaacgacaacctggatctgaaggagatcaacgagaagctggagaaaaatgagaagaag
ctgagaaagcagctgaagatctacaccagcaaagtgaaagaactcgaagcttctcaggcg
gccatgagccgaccccggttaagcagacaggtcacagtgcagagaaaggagaaggacttt
gagggcatgctggagtactacaaggaggacgagcctctgctggtcaggagtctgattgct
gacatgaagccacaggcggtatcagcgacggttccctgtctgccagcgtacatcctcttc
atgtgcatccgtcacgccgactacatcaacgacgatcagaaagtgcactcgctgctcacc
tccaccattaacgccgtcaagaaggttcttaagaggaacaacgacgactttgagatggcc
tcgttctggctggctaacaccagtcgactcctgcactgtctgaagcagtacagcggagag
gagtccttcatgacccagaacgcaccgaaacagaacgagcactgtcttaagaacttcgac
ctggctgagtaccgtcaggtcctgagtgacctgtccatccagatctatcagcagcttatc
aaaatagccgaggccacactgcagcccatgatcgtgtcggccatgctggagagcagaagt
ctgaccggcgtgaagccgctcggctacaggaagcgctccgccagcgtggactgtgagagc
ggaggcccgccagggtacacgctggaggctttgatcaaacagctcggcgagttccacctg
atcatgagcgaacacggcttggacccagaggtcgcgcagcaggtcgtacgccaactcttc
tactgcatcgacgccatcacactcaacaacatgctgctgcgcaaggacatgtgctcatgg
agcaccggcatgcagctcaggtacaatatcactcaaatggaggagtggttgagagacaag
aacatgcaccagaataacatcatcaccaccatcgagcccattatccaggtctcacagctt
ctgcagattaataagaaaacctctcaagatgccgaggccatctgctcccgctgcaccgcg
ctcaccgctcaacagattgtgaagatccttaatctgtacactcctgagaacgagtttgag
gagagagtcactgtgtccttcatcagagagatacagggtctcctccaaggcagagtcgag
aacaaccagctcctgatggacaccaagcacaccttccccgtgctgtttccttattctcct
tcagctttaaccttggattccatgcacatcccagcctctctcaacctgcacttcctgtcc
agggtctga
DBGET
integrated database retrieval system
