KEGG   Trichomycterus rosablanca: 134330136
Entry
134330136         CDS       T09921                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trn04121]
    134330136 (ubap2l)
   03400 DNA repair and recombination proteins [BR:trn03400]
    134330136 (ubap2l)
Ubiquitin system [BR:trn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    134330136 (ubap2l)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     134330136 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 UBA_8 GIP1_N CUE
Other DBs
NCBI-GeneID: 134330136
NCBI-ProteinID: XP_062867196
LinkDB
Position
2:complement(11476268..11536520)
AA seq 1219 aa
MMTSVGGSRNRANWEQTQTQSQSQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLVDI
TGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKETAQTDGCEEG
KENRERGGGGGERDVARRRGGAPRRGRGASRGREFRGQENGLDGVKAGGVAGRGTERGRR
GRGRGRVSLCTCSPAPPLSLNTTRPSPPPILSALTTHFCAATRRGGRFSAQGMGTFNPAD
YAEPAQTEESYAGESNWSNTGDLEPEDSARLEFPKEGTNNPRKFESAPGAWRTATEEWGT
EDWNEDLSETKIFTASSVATMPMPQENVTITAGQRIDLAVLLGKTPPSSSSETESAPLAV
SQPPSLSQGLVFNNSKQSVPLPQPSSSTSYNQHSVVSMLSKGYGEVGDSKGSTGGSTSGS
QFLEQYKTAQALAQLAAQHSQSGPPNTGPSSWESSPASLAQYDLKSQTEASVHSPFTKRQ
PYQPTSSSTPSSMMDTFLQDKPPTVTSLPSRPSSSASLAHAVSASKPPGTMTSQQMSSGP
AEPQASSPLPLQQHKLKQQKKRTSITTKIPSLAVEMPGSADISGLNLQFGALQFGSEPVL
PDYDTSAAATTTPGNVTQNSLYTSTNSEQAPTLPSAPQMEIYEQRAPQTRRYPPSVSSSP
QKDMKPKNGFSSIQTTQSLEAAAVSAKPSSDSAPSTLSNMASLADPISGPASLLTTSSQT
ALSGLGHDDPSSNSIAPSQHNSLSTQQNSLASSVRTANTSLLHSNIDGDSSLHSFSSVSA
VAPSLVPPSSSVSSSSAAPISYSAPVPPPSSVSAASAQSSLGQVSSLAMGLNSVTGVASI
VPPTAASSSVALAAAAPSLASSRSAAASGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQ
VYGYDDLQMLQTRIPLDYYSIPFATATTALTGREGSLTSNPYSAGDLTKFGRGDTSSPAP
ATTLAQAQQSQTQTHHTTQQPFLNPALPPGYSYTSLPYYPGMPGLPNTFQYGPAMFPVAP
ASSKQHGVNVGVNASATPFQQASGYGSHGYTTGYEDLGQASAGSGDFCKGGYGTAVAAAA
AVAAASAQNKPASSVSAPGVGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHAAAAPGASF
SVPSALGSGGPINPPAAAPYAPAPFMHILAHQQPHSQMLHHHLQQDAQSGSGQRSQNASI
QQKSQINKSVYNSYNWGGN
NT seq 3660 nt   +upstreamnt  +downstreamnt
atgatgacatcggtgggcggcagccggaaccgggccaactgggagcagacacagacacag
agccagtcacagcacaagcagaggcctcaggccactgccgagcagatccgactcgcgcag
atgatctcggaccacaacgacgctgactttgaagagaaggtcaagcagctggttgacatt
actggcaaggaccaagacgagtctatgatagcgctgcacgactgcaatggagatgtcaac
agagccatcaatgtgttgctggagggcagccctgacacggactcatgggagatggttgga
aagaagaagggagtgtcaggccagaaggaaactgcacagacagatggatgtgaagaaggg
aaggagaatcgagagagaggaggtggaggaggagagagggatgtagcacgtcgcagaggt
ggagctccgaggaggggtcgcggggccagccgtggtcgagagttccgtggtcaggagaat
ggtctggacggagttaaggcaggtggagtagcaggcaggggcactgagcgtggccggaga
ggaagaggcagggggagagttagtctctgcacatgttcacctgccccgcctctctcactg
aacacaactcggccctccccaccgccaattctttctgccctcacaacacatttctgtgcg
gctactagaagaggaggaaggttttcagctcagggcatgggtacatttaacccagcagac
tatgctgagccagcacagacagaagagagctatgctggagaaagcaattggagcaacacg
ggcgacctggaaccagaggacagtgcaagacttgaatttcctaaagaaggaacaaataat
cctcgcaagttcgagtctgctcctggtgcttggcgaactgctacggaggagtggggcact
gaggactggaatgaggatttatcagagaccaagatatttactgcctccagtgtggcaact
atgcccatgccacaggaaaatgtgaccataacagctggacaaaggattgatttagcggtg
ctactgggaaaaacgcctccctcgtcctcatctgagacggagtctgctccactggcggtc
tcacagcctccatctctatcccagggactggttttcaacaactccaaacagtctgtcccg
cttccccagccttcctccagcacctcatataatcagcacagcgtggtgagcatgcttagt
aagggttatggtgaagtgggagactccaaaggcagcactggaggctccaccagtggctct
cagttcctggagcagtacaagacagcacaggctctggctcagctagctgcgcaacattct
cagagtggcccgcccaacacgggcccttccagctgggagtccagtcctgcttcactggca
cagtatgatctaaaatctcagacagaagcgtccgtgcacagtcctttcaccaaacgtcag
ccttaccaaccaacctcctcttccacgccatcctccatgatggacaccttcctgcaggac
aaacctcctaccgtcacctccctgccctctcggcccagctcctcggcctctctggcccat
gccgtctccgcttcaaagccgccgggcaccatgacgagccagcagatgtcttcgggtccc
gccgagcctcaggcttccagtccccttcctcttcagcagcataagctcaaacaacagaag
aagaggacttccatcaccaccaagatcccttctttggctgtagagatgccaggttcagca
gacatctctggtcttaacctacaatttggagcattacagtttggatctgagcctgtcctg
cccgattatgacacctcagcagcagccactaccacacccggcaatgtgactcagaatagc
ctctatacaagcaccaacagtgagcaggctccaactctgcccagtgcacctcagatggaa
atctacgagcagagagcgccccagacgagacgctaccctccatcggtctcttcgtcgcca
cagaaagacatgaagcccaagaatgggttcagctcaatacagacaacgcagtctttggaa
gctgctgcagtctccgcgaagccatcgtctgactctgcaccctccactttgtcaaacatg
gcttccttggcagacccaatctcaggtccagcctctctgctgacaacatccagtcagaca
gctctttctggtctcggacatgatgacccctcatctaattctattgccccctcacagcac
aattccctttccacacaacagaacagtttggcttcttcagtccgtacagccaacacaagt
ttactgcattcaaatattgatggagactccagcctgcactcattctcctcagtgtcagct
gtggctccctcattggtccctccatcctcttcagtctcatcatcatcagcagcccccatc
tcctacagcgcccctgttcctcctccttcctcggtcagtgccgcctccgctcagtccagt
ctggggcaggtcagcagtctggctatgggtttgaacagtgtcactggagttgcttcaata
gtcccaccgactgcagcttcatcctcggttgcattagccgctgctgcaccttcattggct
tcatcccgcagtgctgctgcctcagggaaagcacctccaaatctgcctcccggagtccct
cctctgctgcccaatccttacatcatggctcctggcttacttcatgcatacccgcctcaa
gtgtacggctatgatgatctgcagatgctccagaccagaatacctctggattactacagc
attccatttgctactgcaaccacagcactgactggcagggaaggcagtttgaccagcaac
ccatattccgcgggtgacctgacaaagtttggtcgtggtgacacatcatctccagctcca
gccaccacgcttgctcaggcccagcagagtcaaacccaaactcaccacaccacacagcaa
cccttcctaaaccctgcattaccccctggttatagctacacaagtctgccatactatcca
ggaatgccaggtctgcccaacacgtttcagtatggtccagcgatgtttccggtcgcacct
gcatcctccaaacagcatggtgtaaatgttggggtcaatgcttcagccacacctttccaa
caggctagtggatatggatcccatggatacactactggctatgaggatttgggccaggct
tcagcagggagcggggatttctgtaagggcggctatggcactgctgtggctgctgccgcc
gccgtcgctgctgcttctgcacaaaacaaaccagccagctcggtgtccgcgcccggagtt
ggagtctctgtgacgtccagcaacactggtgttcctgatatttcaggatctgtttacaca
aagacacagtcttttgaaaagcagggtttccatgcagcggctgcaccaggcgcctcattc
agcgttccttctgcacttggcagcggcggacccatcaaccctccggctgccgcgccctat
gccccagcgccctttatgcacatacttgctcatcagcagccccactcacagatgctgcac
caccacttacagcaggatgctcagagtggctctggacaacgaagtcagaatgcttccatt
caacagaagtcccagatcaacaaatctgtttacaacagctacaactggggaggcaattga

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