KEGG   Trichomycterus rosablanca: 134330141
Entry
134330141         CDS       T09921                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
trn  Trichomycterus rosablanca
Pathway
trn03082  ATP-dependent chromatin remodeling
trn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    134330141
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    134330141
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:trn01009]
    134330141
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trn03021]
    134330141
   03036 Chromosome and associated proteins [BR:trn03036]
    134330141
Protein phosphatases and associated proteins [BR:trn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     134330141
Transcription machinery [BR:trn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     134330141
    SWI/SNF complex
     134330141
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    134330141
   PBAF complex
    134330141
   SWI/SNF complex
    134330141
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 134330141
NCBI-ProteinID: XP_062867204
LinkDB
Position
16:complement(2425800..2437858)
AA seq 373 aa
MALSKTFGQKPIKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
AASSHDHGYTTLATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQSEVLVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTDS
ILDEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPENFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRIRRFANTASAW
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcgttgagtaaaacgttcggtcagaagccgattaaatttcaactagaagaagatgga
gatttttacatgataggttcagaggttggaaactacctgcgtatgttcagaggctcacta
tataagaggtatccgtcactgtggcgcagacttgcgtcggtcgaggagaggaaaaagatt
gcagcatcatcacacgatcatggttacacaactttagccaccagtgtgactctgctgaaa
gcatctgagtgtgaggagatcttcgagggcaatgatgaaaagtacaaggcggtgtccatc
agcacagaacctccagcctacctcagggagcagaaggccaagagaaacagtcaatgggtt
cccacgctccccaacagttctcaccacctggacgctgtgccttgctctaccaccatcaac
cgaaatcgcatggggcgtgacaagaaacggaccttccccctgtgctttgatgaccacgac
ccagcagtgattcacgagaacgcctctcagtcagaggttctggttcctatcagattggac
atggagattgacggccagaagctcagagatgcttttacctggaacatgaatgagaaactg
atgactcccgagatgtttgctgaaatcctgtgtgacgatttggacctgaaccctctgact
ttcgtcccggccatcgcctcagccatccggcagcagatcgagtcgtaccccacagacagc
atcctggatgagcaaaccgaccagagggtcatcatcaagctgaacatccacgtgggtaac
atttccctggtggaccagtttgagtgggacatgtcggagaaggaaaactctccggagaac
tttgcgctgaagctgtgctccgagctcggcctcgggggagagttcgtcacgaccatcgcc
tacagcatccgcggtcagctcagctggcaccagaggacgtacgccttcagtgagaacccc
ttacctacagtagagattgccattcggaacacaggtgatgctgatcagtggtgccctctg
ttggagacgctgacagacgcagagatggaaaagaaaatcagagaccaggacagaaacaca
aggcgtatcaggaggtttgccaacactgcgtccgcctggtaa

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