Trichomycterus rosablanca: 134330153
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Entry
134330153 CDS
T09921
Symbol
atg4a
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04136
Autophagy - other
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134330153 (atg4a)
04136 Autophagy - other
134330153 (atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134330153 (atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134330153 (atg4a)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134330153 (atg4a)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
134330153 (atg4a)
Membrane trafficking [BR:
trn04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
134330153 (atg4a)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134330153 (atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
PH
TGase_elicitor
Motif
Other DBs
NCBI-GeneID:
134330153
NCBI-ProteinID:
XP_062867224
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All DBs
Position
16:15108374..15120554
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AA seq
430 aa
AA seq
DB search
MEKTHTVLAKYENQINVFSEFLEDLPDTDEPVWILGQCYSVKTEKSELLNDVHSRLWFTY
RKKFCPIGGTGPSSDTGWGCMLRCGQMILAQALICSHLGREWRWECEGRQPAEYQRTLQC
FLDRKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNSLAVYVSMDNTV
VIEDIKKQCKQAHQAAQPKEVSSSAESSSGHRLAEDVGLCQAQSPLSLLHVQHSQQSQDW
RPLLLLIPLRMGINNINPVYIQALKECFKMPQSCGVLGGKPNLAYYFIGFIDDELIYLDP
HTTQSAVDSETGCIIDDQSYHCQRSPHRMKITSLDPSVALGFFCKSEEDFNSWCNQVQQE
ILKKRNLRMFELVEKHPSHWPPFVPPTKPEVQTTGAGSQWVQAGIPKQEWKSVIGHLTRS
LSKRGNVAFL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagactcacacagttttggccaagtatgaaaaccagatcaacgtgttctctgaa
ttcctagaagacttaccagatacagatgaaccggtgtggatactggggcaatgttacagt
gttaaaacagaaaagtctgaacttctcaatgatgtgcattcccggctgtggttcacatac
aggaaaaagttttgccctataggaggaacaggcccgtcgtcagacacaggctggggctgc
atgctgcgctgcgggcagatgatactggcacaggccctaatttgcagtcacctaggaaga
gaatggcggtgggaatgcgagggacgtcagccagcagagtatcagcgcacccttcaatgc
tttctggacagaaaagatagctgttattcaattcatcaaatggctcagatgggagtgggt
gagggcaaatctgttggagaatggtatggtccgaacacagtggcacaagtcttaaagaag
cttgccttgtttgatgactggaattccttagctgtatatgtgtcaatggataacacagtg
gtgattgaagatataaagaagcaatgcaaacaggcacaccaggcagcacagcccaaagaa
gtttcctcatcggccgagtcttcatcagggcacaggttggcagaagacgtagggctgtgc
caggctcagagcccactgtctcttttacatgtccagcattcccagcaatcccaggactgg
agacccctgctgctgcttattccactccggatgggcatcaacaacatcaaccctgtctac
atccaggcccttaaggagtgtttcaagatgcctcagtcctgtggagtactagggggaaag
cctaacctagcttattattttattggattcatagatgatgagctgatctatttggaccct
cacaccactcagtcagctgtggactcagagacaggttgcatcatagatgatcagagttac
cactgccaaagaagcccacatcgcatgaaaatcaccagcctggacccatcggtagcactg
ggctttttctgcaagagtgaggaagactttaacagctggtgcaatcaggtccagcaggag
atcctgaagaaacgaaacttacggatgtttgagctggtggagaagcatccatctcactgg
ccaccgttcgttcctccgactaaacctgaggtgcagaccacaggtgcaggttcacagtgg
gtccaagcaggaatacctaaacaagaatggaaatcagtcatagggcatcttacacgctca
ctcagcaaaagaggcaatgtagcttttttataa
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