Trichomycterus rosablanca: 134330186
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Entry
134330186 CDS
T09921
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134330186 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134330186 (cadm1a)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
Nectin family
134330186 (cadm1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
Syndecan
DUF3439
Motif
Other DBs
NCBI-GeneID:
134330186
NCBI-ProteinID:
XP_062867270
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Position
16:complement(25477621..25934951)
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AA seq
437 aa
AA seq
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MANAASGALASLLLLSTIAAAVLQGAAQYPVQSQNLVTDNVSVVEGETATISCRIKNNDD
SVIQLLNPNRQTIYFKDVRPLKDARFQLVNFSDNELRVALSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREEIVSEGNETEFICTAMGSKPAANIKWMKGDKELQGRSK
VEDTFDRMYTVTSWLRFTVTKEDDGVPVVCIVDHPAVKEFQAQKYLEVQYKPEVKIEFPK
GLTREGENLELTCRAKGKPQPQQVNWIKVDDDVPSHAVISGADLYIENLNKSYNGTYRCV
ASNSVGESFDDYTLYVYDAHTTTPIPTTATTTMYTTTSLPGITQDAAPSTEPAAHDSRAG
AGAQRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAII
NAEGGHNNSDEKKEYYI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcggccagcggagctctcgcaagccttctgcttttatccacgattgcggca
gctgttctccaaggagcagctcagtacccagtccaaagccagaacctggtgacagacaac
gtgtcggtggtggagggagaaacggccacgatcagctgtcgaattaaaaacaacgacgac
tccgtcatccagcttctgaaccccaacagacagaccatctacttcaaagacgtcagaccc
ctgaaggacgctcgctttcagctggtcaacttctcagacaacgagctgcgcgtggctctg
tccaacgtttctctctcggatgagggccgatacgtgtgccagctctacacggacccgccg
caggaggcctacgccgacatcactgtgctgatcccacctggcaacccaatcatcgagtca
cgggaggagatcgtgagcgagggcaatgagacagagtttatctgcacagcgatgggcagc
aaacccgctgccaacatcaaatggatgaagggcgataaagagctgcaagggaggtctaaa
gtggaggacacattcgacaggatgtacacggtgaccagctggttaaggtttacagtcaca
aaggaggacgacggcgtgcccgtggtctgcattgtggatcatccggcggttaaggaattc
caggctcaaaaatacctggaagttcagtataaaccagaggtgaagattgagtttccgaaa
ggcctgaccagagagggagagaacctggagctgacatgcagggccaaaggcaaaccacaa
cctcagcaggtgaactggataaaggtggacgacgacgtgccatcacacgccgttatctcc
ggcgcagatctctacattgaaaatctcaacaaatcctacaacggtacttaccgctgcgtg
gcctccaactcggtgggtgaatccttcgacgattacaccctctacgtgtacgatgcccac
accaccacccctatacccacaacagccaccaccaccatgtacaccactacatctctccca
ggcatcacccaagacgccgcgcccagcaccgaacccgctgcacacgactcaagagcagga
gcaggagctcagagggcagtggaccatgctgttatcggaggagtggtggctgtcgtggtc
tttgccatgctttgtcttcttatcattttgggacgatactttgcaagacacaaaggtacc
tacttcacacatgaagcgaaaggggcagatgatgcagccgatgctgatacagccatcatc
aacgctgaaggtggacacaacaactcggatgaaaagaaggaatactatatctga
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