Trichomycterus rosablanca: 134330199
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Entry
134330199 CDS
T09921
Symbol
lrfn4a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134330199 (lrfn4a)
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134330199 (lrfn4a)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
SALM family
134330199 (lrfn4a)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
134330199 (lrfn4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
fn3
Ig_2
LRR_9
LRRCT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
134330199
NCBI-ProteinID:
XP_062867289
LinkDB
All DBs
Position
16:complement(21876680..21882842)
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AA seq
871 aa
AA seq
DB search
MPSSGLLCPSSIKDLPLGTKYICPKRDSCLSFPLSLLWLSLLSYLLLGYCPGVFAGETWG
MVSICPFHCVCRNLSESLSTLCVNKGLLFVPSNIDRRTVELRLADNYILEVGGADFANMT
GLVDLTLSRNTIHNLRPLAFADLESLRSLHLDTNRLTVVGPQDLTGLLNLQHLFINNNQL
TDVSADAFDDFLLTLEDLDLSYNNLRRVPWEAIQNMASLSTLNLDHNLIDQIAEGSFSEL
YKLARLDMTSNRLQTLPPDPLFSRSQIGVVSPTPYNTIISLNFGGNPLHCNCELLWLRRL
IREDDMETCATPAHLAGRYFWSIPEEEFICEPPLITRNTNKLWVLEGQRATLKCRAHGDP
EPVIHWVSPDDRIVANTSRIRSYYNGTLDFLVTRARDDGAYTCIAINAAGESTTQVDLKI
IPLPHKGNGTVSFINARDPGASDISSGRGGSVGGIVTVKNVTGGDGKDENGGSHTGTEKV
VGVLDVTSNSAQVHWYKGRTSLPYLVWMYQIQYNSTADDALVYRILPSTSNSFMLKNLVS
GADYNLCVLAIFDDGISALANTKVLGCTQFSTKEDYPECRSLQAHFLGGTLTVMIGGVVV
VTLLVFTVAMMMRHRVCVDCRDYANQSGEFLPGKGVDVYAQTNGNNSVMMVALPNRLQAQ
QPRPVHTKAKNKEQKKNPGPGSSRGGDIDPTRKKQAQSFTPESEGVTYYYSPAKAALTLP
QPLKQDCKLKLRRSVDKGSVQGFRHSIASVATTQAGKSEGEGSSDLDCEGRQVLGAKRSC
SFDAGEITTTTCYSYAKRLSFIWTRRSQSLHSMLVQCASNTSTSSTASEQYSHVLMHGYL
QTHASNNSSNSNSNSNCSMAANPGDLEESVV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgccaagctctggactgttgtgcccatctagcataaaggatctaccactaggcacaaaa
tacatttgccccaaaagagattcctgcctttcattccctttgtctttgttatggttaagc
ctattgagctatttgctgcttggatactgtccaggtgtattcgctggagagacatggggc
atggtttctatttgccccttccattgtgtatgccggaacctatcagagtctctaagcaca
ctctgtgtgaacaaaggactgctcttcgtcccatccaatattgaccgccgtactgtggag
ctccgccttgctgacaactacatcctggaagtgggtggtgctgactttgccaacatgact
ggattagtggatctgacactttccaggaacacgatacataacctgcgtccattggccttt
gccgatttggaaagtctgcgatcactgcacctggacactaaccggttgacagtagtggga
cctcaggacttaacaggacttctcaaccttcagcatctctttatcaacaacaaccagctt
acagatgtctcagctgatgccttcgatgacttcctgctaacgctagaagacctggacctg
tcctacaacaaccttcgcagagtcccctgggaagcaattcagaacatggccagcttaagc
acactcaatttggatcataaccttatagaccagattgcagagggatctttcagtgagttg
tacaagcttgctaggctggatatgacctccaacaggttacagacacttcctcctgacccc
ctgttctcccgctcacagattggggtcgttagcccaacgccttacaacaccatcatcagc
ttaaattttggtgggaatcctcttcattgcaattgcgagttgttgtggctgcgaaggctg
attcgtgaggatgacatggagacctgtgccacacctgcacaccttgctggacgatacttt
tggtccatcccagaggaggagtttatatgcgagcctccactcatcacccgaaacaccaac
aagctgtgggtcctggaagggcagagggccaccctgaagtgccgtgctcatggtgaccca
gagccagtcatccactgggtctccccagatgatcgaatcgtggccaacaccagccgaata
cgctcgtattacaacggaactctggattttctggtaacacgtgctagagatgatggagct
tacacatgcattgctataaatgcggctggagagtcaaccacccaggtggacctaaagatt
atcccactgccccacaagggaaatggaacagtatcatttattaatgctagagatcctggt
gcttctgacatcagtagtggaagaggagggtctgtgggagggatagtaacagtaaagaat
gtgactggaggtgacgggaaggatgaaaatggtggtagtcacactggaactgagaaagtg
gtgggagttctggatgtgacttcaaactctgctcaggtgcactggtataaaggaagaact
tcattgccgtacttggtgtggatgtaccagattcagtacaatagcacagctgatgatgcc
ctcgtgtacagaattctgccgtctacgagtaacagtttcatgctgaaaaacctggtctca
ggtgcagactacaatctgtgtgtgttggccatttttgatgatggaatctcagccctggcc
aacacaaaagtattaggttgcacccagttcagcactaaagaggattatccagaatgtcga
tcactgcaggcgcacttcctaggtggcacgttaactgtgatgataggcggggtggtcgtg
gtaacgttgctggtcttcacggtggctatgatgatgcgacacagagtctgtgtcgactgt
cgtgactacgccaaccagtcgggtgagtttcttccagggaaaggggtggatgtttatgcc
caaactaacggaaataacagtgtcatgatggtggctttaccaaaccgcttacaagcccag
caaccaagaccagtacatacaaaagccaaaaataaagagcaaaaaaaaaatccagggccc
ggcagcagtcggggtggagatattgacccaacaaggaagaaacaagcacagtcatttaca
ccagaaagtgaaggagtaacatactactactcccctgccaaagctgcactcaccctgccc
caaccactgaagcaggactgcaagctgaagctgcgaaggtctgtggacaaaggtagcgtt
caaggatttaggcactccatagcctcagtggcaactactcaggcaggaaaaagtgaaggg
gagggaagctcagacctagattgtgaaggaaggcaagtgctgggagctaagcgcagctgc
tcttttgacgcgggcgagatcaccacaacaacgtgctacagctacgccaagcgactgagc
ttcatctggacccgccgcagccagtctcttcatagcatgctagtgcagtgcgcgtccaac
accagcacgtccagcacagccagcgagcaatacagtcatgtattaatgcacgggtatttg
caaacccacgcctccaacaactcctcaaactccaattctaactcaaactgtagcatggct
gcaaatcctggagacctggaggagagtgtggtctag
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