Trichomycterus rosablanca: 134330285
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Entry
134330285 CDS
T09921
Symbol
cica
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134330285 (cica)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134330285 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
134330285
NCBI-ProteinID:
XP_062867416
LinkDB
All DBs
Position
2:complement(12104054..12154823)
Genome browser
AA seq
2456 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRKGATDASPEEDKRDTEKKPRLLPSSPKRLISSNSDSSQ
DEPVTSRRTSEREGQKDGILDVSGDSQSFKSGGTQSDSNSSTASANNSPNPSSSRKTATF
KARVPKKKYTSEHYTGNHDNTSTFNTVSQSNSFTPQNGTGASTSQDSATGAAHTDTHNQT
SQLAVGSITGVIHNSVDTQVDRIEDGSSERNKTGMSSPQRCSSTDTASEHSADVDLTTQP
SDSHSKLQGAQAYVNSALPLESLPSAMSEALAKGLKNQRVLARVGTSDGQPSEREQTGVF
RAGVVREVSGEHSSVEVQLNGEKTLCKYPFQGSTNTVDLILDAAPPERAAVPIGTRVCVP
FGMGSEGSEGAPQWYREGLVTQVDSQLAVSSRYCVQLKSNLANEKEGKGSGEDGRDNNPQ
AVWVSRQSLRLLVPPWDLELPQPNEQSNEGRRVASGESKWDTREEMEVEPELCHFSMVHG
MSGPVFVRGMLHPGNASSLPPSSSTCAVSCAITSVLNITPDRDWECRQKEKEMELQRQLE
KDRERERVSLPAPEEDMEVSHFNMAKLREAGLTSVMGSKPLGMTSQHRPILSKPPDYLSP
RLSVVRGIGTPLAPHLALGTSSVLLGMDAAAAAVISSTQQLPLLPPSSSRSSLEKTSTSS
SHGASGGGSSSSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSREGCS
KESQRRGYCSRHLSMRTKEMEAGGGVGRDRSGASSTGTLTPDLRLGGRTSSEFDWDDTSR
DSSEASSRGGDSRPRLVLHSLLPQELPRDLSRFDFDECEAANMLVSLGSSRSGTPSFSPV
SNQSTFSPAPSPSQSPLFGFRPAHFSPITAPPSLTPRRSRHLSGTKLGTPGTERERHLSG
IMPTFQTNLTFTVPMSPSKRKLDAPPPPLPPDYAKSDPQLGDLGLGLSVAFRAVSPQSQP
TTPSSLSFSRPRSATSRPSSSAASTPPPMLVSPTPPSPLPQDPSPRRIVPLRDSPVIVRN
PDVPLAKFSDGPLSRRTGSRSREHSQQPYLAVGLQAPVPINRAATNGAVLLRNPAATLVL
VTSAPSLITVAAGHQTNSCQTTSSVSASGTATGTALASSMSVGRDRERKLGDHTDALGGQ
LPQPMACHPSPTALLPLILPAESPHPAPRKDIIIGRPGTVWTNVEPRSVPVFPWHSLVPF
LETNQSNSSTQPADGQALVNRSNEPQCGVALRSDGRAEHSAAERASPSFPPPTADNQPAD
RDGGDSETESDADDLFYSGASQDPSSSTGPRKRRTQSLSALPKDGDKKREKDHIRRPMNA
FMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPD
WKWCNKDRRKSLSEGRGTPGSKDARERSVSESTDTQSVPQGVDHKEAGSSWVSESERWSR
PLDKPTRPRAFSQSAAHSLERKVDRDHEKEGASSFRTYPLPSLERGASEDVTSDEERMVI
CEEGDDDAMEGSIDLKCKERVTDSDEENDPADETDGKKVICPISNSFSNKETMGNSESAK
NKATEVKIKQEAEAGGGPNEDQKQGGSGMAGDKAGLVHSQSLLSFVHSLNDTLSSDPRAL
TVLGNVRTAPTVVTNVVRPVASAPIAIASKPVEGVVAPGAATYDGKPKLLIAGGGSAGTG
AIAGGGYFSTSSPKPVGQGGLVTGLVLGEALRSPSTAMANNNTVPLPLLQPQLLPLTPHS
CGKQITQVQYILPTLPALANLNSPTAQQPQQPTGVLALPTASPTHVSLANRVSPGVGPGI
RYASAPAVGGGNPGGRVQAPSPVLQNKMLVPMTTVRPGSAPPQPISLVAPPLPVQNGVQP
GSKLIQIAPMPVVQTSMQPAGTVHPGASYPVSVATATVMTSGATSSQAVLLTSSPTRITY
VQPSPAVAAPLSLGSTTAVPSPQQAPPPHTPAFLSSPIATLGFTAIAPACPTLVHPIVAG
QPPLLAQVPPPNGSSHSSASGSNRQLVTAIYPAPSVTLTTGVVSMTTVSQSVASSVPFLT
SLSSPCMKTSLASSVQSHAQNHAEAYSEDTLKMESSKVHKEGTRKEAFSNTTLQTKESGT
SASPTPHMHKGNGDQSPKVKVEHVPSGQELDEQIGKEDSSMEHDSDGDGGGACSSWVEST
VRERGREATPKSLVTDNHNKEEHGKEAARRDVSGLDLSRPPPQSDTPAVKKTKSRPPPLK
STTETVDKVLIDNYIDKRIAELPEFKPEELLPSPSLQNLATSPRAILSSYRKKRRNSTDL
DSVDDPSSPRRKSRRLSSCSSEPNTPKSAAKCEGDIFTFDRTGETEDILGELDRVPYSLR
RTLDQRRALVMQLFQEQGSLFPSAQATSAFQARYSETFPKKICLQLKIREVRQKIMQTAT
PGGSDVTGFGVATGVPDSAPGPSNPTARGEGWPELDEKGSEREEPKNETSESHELR
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccattaaaaaacaaggcagacggtcacctccatccacaagagccaagggaggg
aagagaaaaggggcgactgatgccagcccagaggaggacaaaagagacacagagaaaaag
cccagacttttaccgtcctctcctaagagactgatctcttcaaattctgactcctcacaa
gatgagccagtcacatccaggaggacttcagaaagagagggacaaaaagatggaatactg
gatgtatcaggggattctcagagcttcaagtcaggtggaacacagagcgacagtaacagc
agcacagccagtgccaataacagccccaatccctcatccagccgcaagacagccacattc
aaggcccgtgttcccaaaaagaagtatacttctgagcactatactggaaaccatgacaat
acaagcactttcaatactgtttcacagagcaacagctttacacctcaaaatggcacaggt
gcgagtactagtcaggacagtgccactggagctgcacacacagacactcacaatcaaacc
agccagctggctgtgggcagcatcacaggggtcattcacaacagcgtagacacacaggtg
gacagaatagaagacgggagcagtgagaggaacaagacgggcatgtctagccctcagcgg
tgctcctccacagacacagctagtgagcactcagccgatgtcgacctgacaacacagcca
tctgactcgcactccaagcttcaaggagcacaggcatatgttaattctgcacttccactg
gaaagcctaccgtctgcgatgtcagaagcacttgccaaaggtttaaaaaaccagagggtt
ctggccagagttggcacaagtgatgggcagccttctgaaagagaacagactggagttttc
cgtgctggtgtagtccgggaagtcagtggggaacacagtagtgtggaggtgcagctgaac
ggggagaaaaccttatgcaaatacccattccaagggtctaccaatacggtggacctgatt
ttggatgcagccccaccggagcgagcggctgtgcccataggaacacgtgtgtgtgtgccg
tttggaatggggagtgaaggtagcgagggggcaccacagtggtacagagaaggcctggtc
acccaagtggactcccaacttgcagtttcctctcgctactgtgtccagttaaagagtaat
ttagcaaatgaaaaggaggggaaaggatccggagaagacggaagagacaacaatcctcag
gcagtgtgggtatcgcggcagagcctacgcctcctggttccaccctgggacctggaattg
ccacaacccaatgagcaaagtaatgagggtcgaagagttgcgtcaggcgagagtaagtgg
gacacgagggaggagatggaagtggaaccagagctgtgtcattttagcatggtgcacgga
atgtctggtccagtgttcgttagagggatgctgcaccctggaaatgcatcttctttacct
ccgtcgtcctccacatgtgccgtcagctgtgccatcacttctgtccttaacataacacca
gacagagactgggaatgcagacaaaaggagaaagagatggagctgcaaaggcagttagaa
aaagacagagaaagggaaagggtttctttaccagctccagaagaagacatggaggtcagt
cattttaacatggccaaactcagggaggctggcctcacgtcagttatgggcagcaaacca
ttgggtatgacctctcagcatcgaccaattctctctaaaccaccagactacctcagccct
cgcctgtcagtggtacgaggcattggtaccccgttagcaccccacttggcccttggaacc
tcatctgttctcctgggcatggatgcagcagcagcggcagtcatctcttccacccaacag
ttgcctttactgcctccctcttcttctcgcagttcacttgaaaagacttccacttcaagc
tcccatggtgcatctggaggtggctcaagctcctcatcttcttcttcacgttcccgtaca
ccactcacagctgcccagcagaagtacaaaaagggggatgtggtgtgtactcctacaggc
atccggaaaaagtttaacgggaaacagtggcgacgcctgtgctcccgtgagggctgctcg
aaggagtcccagcgtcgtggttactgctcacgtcacctgtccatgcgcactaaagagatg
gaggcaggaggcggggtgggcagagacaggagtggtgccagcagcacaggcacccttaca
cctgatctccgcctagggggtcgtaccagcagtgagtttgactgggatgatacatcacgg
gacagtagcgaagccagcagtcgtggaggagactcacgtcctcgtctcgtcttgcattcc
ctcttaccgcaagagctgccacgtgatctatcacgcttcgactttgatgagtgtgaggcg
gcaaacatgctggtgtctctcggtagctcacgttcaggcactccgtcattctcccctgtg
tctaatcagtcaactttctctcctgccccctctccttcacaatctccattatttggcttt
cgtccagctcactttagtcctatcacagcacctccatctcttacccctcgacgttcacgg
catctcagtggcaccaagctgggcactcctggcacagaacgggagcgccacttatctgga
attatgcctacctttcagaccaacctgacctttactgtacccatgagtcctagtaagcgc
aagttggatgccccgccacctccacttccacctgactacgctaagtccgacccccagctg
ggtgacttgggactaggtcttagtgtggcatttagggcagtgtcacctcaaagccagccg
accactccttcctctctttctttttcccgaccaaggagtgcgaccagtcgcccctcatca
tctgctgcatccaccccaccacctatgttagtttctcccacacccccttcacccctgcct
caggaccccagcccacgtcgcattgttcctctgcgggattcacctgtcattgtccgcaac
cctgacgtgccactggctaagttcagcgacggtcccttaagtcggagaacaggctcccgc
tccagagagcacagtcagcaaccttaccttgctgtgggactccaggctcctgtgcccatt
aacagagctgccactaatggtgcggtcttgctccgaaatcctgctgccaccttggttctg
gtgacttctgcaccatcactaattactgttgcagcagggcatcaaaccaactcatgccag
accacgagcagtgtgtctgcttctgggacagccactggtacagctttggcgagttcgatg
tcagtaggaagagacagagagagaaaactaggtgatcatacagatgcactcggtgggcag
ctgcctcaacctatggcttgccatccaagtcccactgctctactgcctctcatcctacca
gcggagtctccacatcctgccccccgcaaggatattatcataggacgacctggtacagtc
tggaccaatgtggaacctcgctcggtgccagtatttccctggcattcattagttcctttt
ttagagaccaaccaatcaaattcctccacccagcctgctgatggtcaagcacttgtgaac
agaagcaacgagccacaatgtggagtagcacttaggagtgatggccgtgccgagcattca
gctgcagagagagcgtcaccttctttccctccacccactgcagataaccaaccagcagac
agagatggaggagatagtgagacagagagtgatgctgatgatctgttttactcaggtgca
tcccaagacccttcttcctccactggtccgagaaagagacggacccaatcacttagtgcc
ctgcccaaagatggtgacaagaagagagaaaaggaccacattcggcggcctatgaacgca
ttcatgatcttcagcaagcgtcatcgtgctctggtgcaccagaggcacccgaaccaggac
aaccgcacagtcagtaagatcctgggtgagtggtggtatgctctgggtcccaaagagaag
cagaagtaccatgaccttgccttccaggttaaggaggctcacttcaaggctcaccctgac
tggaagtggtgtaacaaagacaggaggaaatctctgtctgagggtcgaggcactccaggt
tccaaagatgctcgagaacgaagtgtttctgaaagcacagacacccagtcagtgcctcag
ggggtggatcacaaggaagcaggatccagctgggtatcagagtcagagcgctggagcagg
ccactggacaagcctacaaggcctcgtgctttttcccagagtgcagcgcacagcttggag
aggaaagtcgatcgggatcatgagaaggagggagccagctcatttcggacttacccgctt
ccttccttggagcgtggggctagtgaggatgtaaccagtgatgaagagcgaatggtcatt
tgtgaggaaggagatgatgatgccatggagggctccatagatctgaagtgcaaagaaaga
gtgacagacagtgatgaagaaaatgaccctgcagatgagactgatggcaagaaagttatt
tgtcccatctcaaattctttctcaaacaaagagacaatgggcaacagcgagagcgcaaag
aataaagctacagaagtaaagataaagcaagaggcagaggctggaggaggaccaaatgaa
gatcaaaaacaaggaggcagtggaatggcgggagataaagcagggctggtccactctcaa
tcacttctatcatttgttcatagcctaaatgacactctctcatctgatccaagagcatta
acggtgctggggaatgtccggacagcccccactgtagtgacaaatgtggttcgacctgtt
gctagtgctcccattgccattgccagcaaacctgttgaaggggttgtggctcctggagcg
gcaacctacgatgggaagcccaagctcctgattgctgggggaggatcagcaggaactggg
gccattgcaggaggtgggtacttttctacctcctcccctaaacctgttggacaagggggt
ttagtgacaggtttagtacttggagaagcattacggagtcctagtaccgcaatggctaac
aacaatactgttcctctgcctttgcttcaaccccagttgctcccacttactccccatagc
tgtggaaaacaaatcacccaggtgcagtacatccttccgactctgccagccctagccaac
ctaaacagccccaccgcacagcaaccccagcagccaactggtgttctagctctgcccact
gcctcgcctacacacgtatcccttgctaacagagtgtctccaggggttggtccagggata
agatatgcctcagcgccagcagtgggagggggcaaccctggaggaagagttcaagcacca
tctccagtcttacaaaacaagatgttagttcctatgacaacagtacggccaggctccgca
cctccgcagcctatttcccttgtggccccgccacttcctgtccaaaatggggtgcaacca
ggaagtaagctcattcagattgcacctatgccggtcgtccaaacaagcatgcagcctgct
ggaactgtacatcccggagcctcctacccggtctctgtggcaaccgcaactgtcatgacg
tcgggtgccacgtcctcccaggcagtgctattgacttcatcccctacaaggattacttac
gttcaaccatcccctgctgttgctgcccctttgtctctggggtccacaactgcagtcccc
tctccccagcaagccccgccccctcatacaccagcatttctatcatcgcctatagccacg
cttggcttcactgccatcgcgcctgcttgtccgacgttggtgcacccaatagtggcaggc
cagcctcccctcctggcccaggttccaccccccaatggttcttctcactcctcggcctcg
ggatccaatcgccagctagtgactgccatttatccagccccaagtgtcaccctgacgaca
ggagtggtttctatgacgactgtttctcaaagtgtggctagctctgtgccattcctgaca
tccctctcatcaccttgcatgaagacatcactagcatcaagtgtgcagtcacatgctcaa
aatcatgcagaggcttattcagaggacactttgaagatggagagctctaaagtacataaa
gaaggaacacggaaagaagctttttcaaacacaacccttcagactaaagaatcaggaaca
tctgctagtccgaccccacacatgcataaaggaaatggagatcagtcacccaaagtcaaa
gttgagcatgttccctcaggacaggagttggatgagcagattggaaaggaggacagcagc
atggagcatgacagtgatggagatggtggaggagcttgctcttcttgggtggagagtaca
gtgagagagagaggacgagaagcaacacccaaaagtctggtcactgataaccacaataaa
gaggaacatggtaaagaggctgcccgaagagacgtgtctgggttggacttgtctcggcct
ccacctcaaagtgacactccagcagtaaaaaagaccaagtcccgtcctccgccactcaag
agcaccactgaaactgtagacaaagtgctgatcgataactacattgataagcgcatagct
gagctgcccgagtttaagccagaggaattgctaccctctcccagcctgcagaatctggcc
acatctccccgagccatactcagcagctatcgcaagaaaaggaggaactcaacagatctt
gactctgttgatgatcccagctctccaaggagaaagagtcgtcgcctgtccagctgtagc
tcagaacccaacacgcccaagagcgctgccaagtgtgagggagacatattcacctttgac
agaaccggagagacagaggacattttaggcgagctggaccgtgtgccatactccctgcgt
cgcacattggatcagcgccgggcccttgtcatgcaactctttcaggagcaaggctccctc
tttccttcagcccaggctacatcagctttccaggctcgctactctgaaacctttccaaaa
aaaatctgtttacagttgaagattcgtgaagtgaggcagaagatcatgcagacagccaca
cccggaggctcagatgttacagggtttggagtggcaaccggtgtcccagactctgcacca
ggaccatccaatcctacggccagaggcgaaggctggccagaattggatgagaaaggctca
gaacgggaagagcctaagaatgagacgagtgagtcgcacgagctgagataa
DBGET
integrated database retrieval system
