Trichomycterus rosablanca: 134330287
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Entry
134330287 CDS
T09921
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134330287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134330287
Transporters [BR:
trn02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
134330287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_3
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
134330287
NCBI-ProteinID:
XP_062867415
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All DBs
Position
16:1813416..1838787
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AA seq
729 aa
AA seq
DB search
MDDTYGERTSLSRGARDIAKEAKRHAAKKVNKVIDRASDEYSGRTYHRFDNDEEDEGGDD
ERYHYQDGEAQQHEDDEGSSDATEGHDDEDEIYEGEYQGVPNKDAQGGVALGRPVADGTK
DRRELQKEREAEEEELAQQYELIIQECGHGRFQWQLFFVLGLALMSDGVEVFVVGFVLPS
AETDMCVPNSGAGWLGSVVYLGMMFGAFFWGGLSDKVGRRQCLLVCMSVNGFFAFLSSFV
QGYSTFLFCRMLSGFGIGGTVPIVFSYFAEFLAREKRGEHLSWLCMFWMIGGIYASAMAW
AIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVSLTLMPESPRFYLEKGKHDEAWM
VLKQIHDTNMRARGEPEKVFTVNRIKIPKQLDEFVEMQSESANPAAKVLFRIRSELRGIW
LTFLRCWDYPVKDNTMKLAIVWFSLSFGFYGLSVWFPDVIKHLQADEYAARVKIHNNERI
EDFTFNFTLENQVHSNGAFINDRFISMKFKSVTFKNSVFQNCYFEDVTSVGTYFKNCTFL
DTFLYNTDIDDSKLIGTSVINSTFAHNKTGCQITFDDDYSAYWVYFINFLGTLAVLPGNI
VSALLMDKVGRLSMLGGSMVLSGISCFFLWFGTSESMMIAMLCLYNGLSISAWNSLDVVT
AELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAVPILLASCVLVGGGLVGLRL
PDTRSNVLM
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacgtacggggagagaacgtctctgagccgaggcgctcgcgacatcgccaaa
gaggccaaacggcacgcggccaaaaaagtcaacaaggtgatagaccgggcctcggacgaa
tactccggccgcacctatcaccgtttcgacaacgacgaagaagacgagggcggcgatgat
gagcgttaccactaccaggacggtgaggcgcagcagcacgaggacgacgaaggctcgagc
gatgcgacagaaggccatgacgatgaagatgagatctatgagggcgagtaccagggtgtg
cccaacaaagacgctcaaggcggggtggcgctcgggcgcccggtcgctgacgggacgaag
gaccggcgagagctgcagaaggaacgggaggcggaggaagaggagctagcacaacagtac
gaactgatcattcaggagtgcggacacgggcggttccagtggcagctcttcttcgtgctg
ggtttggccctcatgtccgacggtgtggaggtttttgtggtcggatttgtgctgcccagt
gccgagacggacatgtgtgtgcccaactctggggccggctggctaggtagcgtggtgtac
ctgggcatgatgtttggagcgtttttttggggcggcctgtcggataaggtgggccgaaga
cagtgcctgctggtgtgcatgtcggtcaacggcttcttcgccttcctgtcctcgttcgtg
cagggttacagcacgttcctcttctgcaggatgctctccgggttcgggatcggcggcact
gtacccatcgtgttctcatactttgctgagttcctggcgagggagaagcgtggcgagcac
ctgagctggctctgcatgttctggatgataggcggcatttatgcctcggccatggcctgg
gccatcatcccgcactacggatggagcttcagcatgggttctgcgtatcagttccacagc
tggagagtgtttgtggtggtctgtgccctgccgtgcgtctctgcagtcgtctcgctcaca
ttaatgcccgagagtccacgtttctacctggagaaggggaagcatgatgaggcatggatg
gtgctgaaacaaatccatgataccaatatgcgtgcacgtggagagcctgagaaagtcttt
accgtgaaccgaataaagataccaaagcagttggacgagtttgtagagatgcagtcggag
tcggcgaaccctgcggctaaagttctcttcaggattaggagtgaacttcgtggaatctgg
ttaacgtttttgagatgctgggattatcctgtgaaagacaacacaatgaaattggctata
gtgtggttctctctgtcttttgggttctacggtttgtccgtgtggtttcctgatgttata
aagcacctgcaggcggacgaatacgcggcgagggtgaagatccacaacaacgagcgcatc
gaagacttcaccttcaacttcacactggagaaccaggtgcattctaacggggccttcatc
aacgacaggttcatcagtatgaagtttaaatcggttaccttcaaaaactccgtctttcag
aactgctacttcgaggacgtcacttcggtcgggacatacttcaaaaactgcacctttctg
gatacgttcctctataatacagatatcgacgactccaaactgatcgggacgtctgtgata
aacagcacatttgcacacaataagaccggctgccagatcaccttcgacgatgactacagt
gcttactgggtgtacttcatcaacttcttgggtaccctggctgtgttgccaggcaacatc
gtctccgctctgctgatggataaagttgggaggttgagcatgctcggaggctcgatggtg
ctgtcgggtatcagctgtttcttcctgtggttcggtaccagtgagtcgatgatgatcgcc
atgctttgtctctataacggtctcagcatatccgcctggaactctctggacgtggtcacg
gctgagctctaccctactgataggaggggcaccgggttcggcttttgtaacgccatgtgt
aagctggcggccgtgttgggtaacctgatcttcggctccttggtgggcatcactaaggcc
gtccctattctcctggcgtcgtgtgtgctggtgggcggtggccttgtgggacttcggctc
ccggacacgcgttccaacgtcctaatgtga
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