Trichomycterus rosablanca: 134330345
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Entry
134330345 CDS
T09921
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04120
Ubiquitin mediated proteolysis
trn04144
Endocytosis
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134330345 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134330345 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
134330345 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134330345 (nedd4l)
04121 Ubiquitin system [BR:
trn04121
]
134330345 (nedd4l)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134330345 (nedd4l)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134330345 (nedd4l)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
HECT type E3
134330345 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
134330345
NCBI-ProteinID:
XP_062867497
LinkDB
All DBs
Position
16:complement(751650..797791)
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AA seq
1193 aa
AA seq
DB search
MSRRLRLYFGSSRSNTAPELLEDPEEDADARADRPAAMRYQTHLRNFPVKDDDAVSDAFL
KRSSSMFIPQLQSQPEPRPTKSSSVQISLQRSATPQGDSEPEEPPPEYVQDPAPAYTEPE
FCPSYGRYAPLADSAHPKRRVFCVRPYDLHNGASSGFSIRQSSPTEPPGVRQFRIIPYGP
DGHNGARRWSVQPSGPRRLVLQLQQDRDRDASDPKAARAPRCPRIRLERSTSQPLLTRQV
PSRPGSMPNLHAPISETDAEGEDGARRCTFRIRKEPNPGQPRFKIYFSQGGERRADPALD
GNPGEGFTWNGPKASSGHDRLKTGRFHLGQTRDDFLGQVDVPLNHLPTEDPAMERPYTFK
DFLLRPRSHKSRVKGYLRLKMAYLPKNGAPEEEAGEIREEAEGWEVESVDHGGSQRSQQL
LPPLPPGWEEKVDNLGRTYYVNHNNRTTQWKRPSTVDVASDTENDNQLRQINQEAHRVFR
SRRHISEDLENEHLDPRELDDSLPLQSWDPITEEDFSGMSEAMSGPTPLATPVHQFSAPE
FSEEISMRLSLTPSSNGETPGTSSGGSLLSSRLRSSSMTDGVSDQAQTPSPMSLPSGWEE
RKDSKGRTYYVNHNNRSTTWTRPILQLTEDGISSSAGAVGGAPPTTPSSSSGHLSEPQMR
RPRSLSSPTVTLSTPPEGANSVPLPRVVKDTLSNPQSPQPSPYSSPKSQHKAAQSFLPPG
WEMRISPNGRPFFIDHNSKMTTWEDPRLKYPVHLRTKAALDPGDLGPLPPGWEERVHADG
RTFYIDHNTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKL
HRSSIFEESYRRIMSLKRPDVLKSRLWIEFESEKGLDYGGVAREWFFLISKEMFNPYYGL
FEYSATDNYTLQINSNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLGK
PITLNDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNE
NKKEYIDLVIQWRFVNRVQKQMNAFLEGFTELIQIDLIKIFDENELELLMCGLGDVDVND
WRQHTVYKNSYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGP
QLFTIEQWGTPDKLPRAHTCFNRLDLPAYESFEDLREKLLMAVENAQGFEGVD
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccggctgcgcctgtacttcggatccagccggagcaacacggctcccgagctg
ctggaggatccggaggaggacgccgacgcccgcgccgacaggccggcagccatgcgctac
cagacgcatctgcgcaactttccggtcaaggacgacgacgccgtgtcggacgctttccta
aaacggagctcgtccatgttcatcccgcagctccagagccaacccgagcccaggcccacc
aagagctcctccgtgcagatttccctacagcgctcggctacgccgcagggagattcagaa
ccggaggaacctccaccggaatacgtccaggatccggcgccggcctacaccgaaccagag
ttctgcccgagttacggtcgctatgcaccgttagcggattctgcccatcccaagcggcgt
gttttctgcgtacggccgtacgatctgcacaacggcgcctcctcaggattctccatccga
cagtccagtcctacagaacccccgggcgtccggcagttccggatcatcccgtacggcccg
gacggtcataacggcgcccgccgctggtccgtccaaccgtccggcccacgcaggctggtc
ctccagctccagcaggacagagaccgcgacgccagcgatcccaaagcggcccgcgccccg
aggtgtccccggatccgcctcgagaggagcacgtctcagcccctgctgaccagacaggtg
ccctcccgtccgggatccatgcccaatttacacgctcccatttccgaaacggacgccgag
ggcgaagacggagctcgacgttgtacgttcaggatcagaaaagagccgaaccccgggcag
cccaggttcaagatctatttcagccaagggggcgagcgcagggccgaccccgcgctggat
ggtaatcctggcgaaggatttacatggaacggcccaaaggcctcttccggtcacgatcga
ctcaagaccgggcgtttccacctgggccagacgagggacgacttcctggggcaggtggac
gtccctctgaaccacttgccgacggaggacccagcgatggagcggccgtacaccttcaag
gacttcctcctgagacccagaagtcacaagtcgagggtgaaaggttacctgaggttaaag
atggcttacctgcccaagaatggagctccggaggaggaagctggtgagatcagggaggaa
gccgaggggtgggaggtggaatctgtggatcacggcgggtctcagcgctctcagcagctt
ctgccgccgttaccgccgggctgggaggagaaggtggacaatctgggcaggacgtactac
gtcaatcacaacaaccggaccacgcagtggaaacgacccagcacggttgacgtggcgtcg
gacaccgagaacgacaaccagctgcgtcagatcaaccaggaggctcaccgcgtgttccgc
tccagacggcacatcagtgaggacctggagaacgagcacctggaccccagagagctggac
gattccctccctttgcagtcctgggacccaatcaccgaagaggatttctccgggatgagc
gaggccatgtccggccccacccccttggccacacccgttcatcagttcagcgctccggag
ttttcggaggagatcagcatgaggctctcactcacgcccagcagcaacggagaaacgccc
ggaaccagcagcggtgggtccctcctctcgtccagactgcgctcctccagtatgacggac
ggtgtgagcgatcaggctcagactccctctccaatgtctctaccctcaggctgggaggag
agaaaggacagtaaaggcagaacgtattacgtcaatcacaacaatcgcagcaccacatgg
actcgtccgattctccagctcactgaggacggaataagttcctctgcaggagccgtaggg
ggcgccccgcccaccacgccgtcgtcatccagcggacaccttagcgaaccccaaatgaga
cgacctcgtagccttagctcccccaccgtcaccctctctactcctccagagggagccaat
agcgtgccgcttcctcgggtggtgaaggacaccctgtcgaaccctcagtcgccccagccg
tcaccctacagctcccccaaatctcaacacaaggcggctcagagcttcctgccgccgggg
tgggagatgaggatctcccccaacggacggccgttcttcatcgaccataacagcaagatg
acgacctgggaggatcctcgtttgaagtacccggttcacctgaggactaaagcagcgctg
gaccctggagacctcggcccactgcctccgggatgggaggagcgagtccatgcagacgga
agaacgttctacatcgaccacaacaccaaaaacacacagtgggaagatcctcgcctccag
agtcccgccatcacaggaccggctgtgccgtactcacgagagttcaaacagaagtacgat
tacttcaggaagaagttaaagaagccggcggacatcccgaaccgcttcgagatgaagctc
cacaggagcagtatctttgaggagtcgtaccggaggatcatgtccctcaagagacccgac
gtgctcaagtcgcgcctctggatcgagttcgagtcggagaaggggctggactacggcggc
gtggccagggagtggttcttcctcatctccaaggagatgttcaacccttattatggtctg
ttcgagtactcggccacggataactacacactccagatcaactcgaactcgggcctgtgt
aacgaggatcacctctcctacttcaagttcatcgggcgggtagcgggcatggccgtgtat
cacggcaagctgctggacggtttcttcatccgacctttttataagatgatgctgggaaaa
cccatcacgctgaacgacatggagtctgtggacagcgaatactacaactctttgaagtgg
atcctggagaacgaccccaccgagctggatctgcggttctgtatcgacgaggacaatttc
ggccagacgtaccaggtggatctgaagcccagcggctcagacatggtcgtcaccaacgag
aacaagaaggaatatatcgacctggtgatccagtggaggtttgtgaacagggtgcagaaa
cagatgaacgcgttcttagagggattcacagagctcatccagatcgacctaatcaagatc
ttcgatgagaacgagttggagttgctgatgtgcggtttgggcgacgttgatgtcaacgac
tggaggcaacacaccgtctacaaaaacagctactgccccaatcaccccgtcatccagtgg
ttctggaaggctgtgttgttgatggatgctgagaaaaggattcggctgctgcagttcgtc
acaggaacatccagagttcccatgaacggttttgccgagctctacggttcgaacgggccg
cagttgtttaccatcgagcagtgggggacaccggacaaactcccccgcgctcacacatgt
tttaacaggttggacctcccggcgtacgagtccttcgaggatctgagggagaagctgctc
atggctgtggagaacgcgcagggcttcgagggcgtcgactaa
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integrated database retrieval system
