Trichomycterus rosablanca: 134330417
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Entry
134330417 CDS
T09921
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
trn
Trichomycterus rosablanca
Pathway
trn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134330417 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134330417 (uimc1)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
134330417 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
DUF5847
Motif
Other DBs
NCBI-GeneID:
134330417
NCBI-ProteinID:
XP_062867614
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All DBs
Position
16:complement(17951787..17972026)
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AA seq
927 aa
AA seq
DB search
MPRRKLTTSVYEKRRKVRRTDNDEDAVVITDSENEEEEDNAFKVSSRESRSEERKRRAQI
KDMTEEEMLDLAMRISKQEATSATQREELEDADIKKAIAESLHASHDQAPETNSSKVKPH
QDPDTVPAHLRRKLSFTSKIGKHCRSADEDTNRAVSGVEHIREESPLPPMPDLSPPSSAV
PSAASQESDCHTDLNQKEYNTDSPDDEPVESSSQLLSSPVFHRKRLNRDLPSTSKALRTL
PCTSESSLSLTCPDQSQFTQQQSTSSPKSPVFARTDPKERSRLRDTASHCTASNSFTDNV
CKPEDTCKGSSSHKSLCRVVRDSGKRLSLSGKALPLADDSAPEDLDVKQESDEPKHKKHD
STWETNLTNTSEREDSKSMNEFTSHMVLHLSDEDKDGDAENELIVSPSPVFPQQCVSRTG
QPKLSPTQPCSPSTDFDITDTPSHTTQDSVKKKGTPKPSQQTDQPEASVAETVACGSRLA
SSVAGKGEGLVSYYWGVPFCPKGQSPDEYTQVILTQLEVYEKSLKEARRQLLRKAEWGLP
VSPCPAERSFGRRLKRHRAPQLLEEEEEERNEGKKEKRKAVECDGMEGMRTSTEELENAQ
SETYVVVSSPEAHEENVQKSPSLFVQQESRNTVKHSRKSSPKDASDDTPIQQSDEHTYDV
HNGSFDVENTVCPETQMTEDNTPELMVTSPTQPQSRTESKVMEVDEREERPAEAEEIMEQ
EEHMSESEPPQGQSEMECPICSCLFPLSKIEMHAAYCDGTVNVQDQEESNSQATVRRTRK
IHLAMKEVSSSEKLEQQEKCYLCQKMCSSKEYDQHVDQCLKKKDVKANQGNGLLSALNRT
EERHLDDDDAAGPSNTAPRNSRGLAGRSVVDETSESTDSQASGFKISSSPIKSFTPISEV
TDCLIDFSKQYSARNDQRAERKRKFKR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaggaaactaaccacaagtgtctatgaaaaacgtagaaaagttcgtcgaaca
gataatgacgaagacgctgttgttatcaccgattctgaaaacgaagaggaagaagacaat
gcttttaaagtgtcatccagagaatcccgatcggaggagagaaaaaggagagcacagata
aaagacatgacagaggaagagatgctggacttggctatgagaatcagtaagcaagaagcc
acaagtgctactcagagagaggaactggaagatgccgacattaaaaaagccattgcagaa
agtcttcatgccagtcatgaccaagctccagaaacaaacagctctaaggtaaagcctcat
caggacccagacaccgtgccagcccacttgagacgcaagctgtctttcactagcaagatt
gggaagcactgcaggagtgctgatgaagataccaatagagcagtgagtggtgtggaacac
attcgggaggagagtccgctgccaccaatgcctgatctgtcacctccaagttcggctgta
ccttctgcagcttctcaagaatctgattgccacacagatctaaatcaaaaggagtataat
acagactctccagacgatgagcctgtagagagcagctctcagctcctgagttctcctgtt
tttcacagaaagagactaaaccgggacctgccaagcaccagcaaagccttacggactctc
ccatgtacctctgagagttctctcagtttaacctgtcccgatcaatcccagtttactcag
cagcagagcacatcttctcccaaaagccctgtttttgctaggactgacccgaaagaaagg
tctagattaagggacacagccagccactgcactgcttcaaacagctttacagacaatgtt
tgcaaacctgaggacacatgcaaaggatcttcaagccataaaagcttatgccgtgtggtc
agagattctggcaaacgactttcactcagtggaaaagctctgccattagccgatgattca
gcacctgaagatttggatgtgaaacaggagtctgacgagccaaaacataaaaagcatgat
tccacttgggaaaccaacctgaccaacacatctgagagagaagacagcaaatcgatgaac
gagttcaccagtcacatggtcctacatttgtctgatgaggataaagatggtgacgcagag
aatgaactgattgtttcgccaagtcctgtcttcccccagcagtgtgtttcacgcacaggc
cagccaaaactctctccaactcaaccctgctccccatccacagacttcgacatcactgac
acaccaagccacaccacacaagactcagttaaaaagaaagggacccccaaaccctctcag
caaactgaccaaccagaagcttcggttgcggaaaccgttgcctgcggctctagacttgca
tcatcagtggcgggaaaaggagaaggtctcgtatcctattactggggtgttccattctgc
cccaaaggacaaagcccagacgaatacacgcaggtcatcctcacccaactggaggtgtat
gagaagagcctgaaagaggcccggcgccagctgctgcgcaaggctgaatggggtcttcca
gtgtccccatgcccagcagaacgatcatttggtaggagattaaagcgccacagagctcct
cagcttttagaggaggaggaagaagaacgaaacgaagggaaaaaagagaaaaggaaagca
gtagaatgtgatggaatggaagggatgaggacttccacagaggaacttgaaaatgctcag
agtgagacatatgtggttgtttcatctcctgaagcacatgaagaaaatgtgcaaaaatca
ccttcgctgtttgtccagcaggagtctcggaacactgttaaacattccagaaagtctagt
cctaaagatgcttctgatgacactccgatccagcagtctgatgagcacacgtatgacgtt
cacaacggaagtttcgatgtggagaacacagtgtgtccagaaacacagatgactgaagac
aacacaccagagctgatggtgaccagtccaacacagccacagtctcggacagaaagtaag
gtgatggaggtggatgaaagagaggagcgacctgctgaagctgaggaaataatggagcag
gaggagcacatgagtgagtctgaacctcctcaaggccaatcagagatggagtgtcccatc
tgctcctgcctttttcctctcagtaagattgagatgcacgctgcctactgtgatgggaca
gtgaatgtacaggaccaggaggaaagcaattcacaagcaacagttcgacggacaaggaaa
atacatttagcaatgaaagaggtttcaagttctgagaaattagagcagcaagagaaatgc
tatttgtgtcaaaaaatgtgctcaagtaaggagtacgaccagcatgtggaccagtgcctt
aagaaaaaagacgtcaaagccaatcagggaaatggcttgttatctgccctgaatcggaca
gaagagagacatctagatgatgatgatgcagcaggaccatccaatactgcacctagaaac
agtcgtggccttgcaggtcgttcagtggtagatgaaaccagtgaaagcacagactctcaa
gcttcaggttttaagatcagctcctctcctatcaaatccttcacacccatctctgaagtt
acagactgtctcatagacttcagtaagcagtactcagccaggaacgaccagagagccgaa
agaaagaggaaatttaagagatag
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