Trichomycterus rosablanca: 134330422
Help
Entry
134330422 CDS
T09921
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134330422 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134330422 (ctdp1)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
134330422 (ctdp1)
Protein phosphatases and associated proteins [BR:
trn01009
]
HAD phosphatases
Fcp/Scp phosphatases
134330422 (ctdp1)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134330422 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
Biotin_lipoyl
BRCT
PTCB-BRCT
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
134330422
NCBI-ProteinID:
XP_062867624
LinkDB
All DBs
Position
2:13924648..14012015
Genome browser
AA seq
866 aa
AA seq
DB search
MEDLSDSGGGSSAHLGPVVQVTEVRLPLVPCPMRLVEWKVKPGALVNVDSVVAVCVAIPT
KSESGSEERGRTKNLPERKVKSDRAGVVRELCYELGQIISSGDVIAKIEECSHPIVMKGL
CAECGLDLTQLQSRNGKQQVPVSTAMVSIVHSVPELMVSSEQAEQLGREDQKRLHRNRKL
VLMVDLDQTLIHTTEQHCQRLSSKGIFHFRLGRGEPMLHTRLRPYCKEFLEKISKMYELH
VFTLGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDD
REDVWKFAPNLVTVKKYVYFKGTGDINAPPGSPEVQMAKKTTGNFSSQPVESSDSSKTLG
HDEKHSSGKPGFQAIENEEQLSKTRTLKQTKLDKHDCSIKSVEGNETEEALFNKKESLSD
LDNSCADKKEAETESQNSENSGVNMGEESLDHSMVDEEEENDTDQDDHLIYLEEILTRIH
KEYFLRYESYIQGECTEVPDIRKIVPELKSKTLSGTTIVFSGLYPTNYPMERTRESYHAK
TLGAIIGKSLVLDAKDPSCTTHLIAARAGTEKVRQAQACKHLHVVNPDWLWECLERWERV
EEKLFPLKESYNKSQRSNSPIAFPDVQEIFPAPVMHPVLIQSKVSRTPEVRTYDAVTGKL
IRRTAHHLSCKQPQSTPVTHSRHEEHFNLRHSGSQQQGNLNSSGPEDEQPGLSRRKRQPS
MSETLPLYTLCKEDLDSMDKEVNDILGEESDNESDEKGHDVRVRGEDEDQSNISSVITIP
GDHQQALGTFVEDTRLTLFSDDISLTEKMPRGHKRKLQEAKKDEDVDDNDVQLTSQHSKD
SNEDEGSSSEADEMAAALEAELNDFM
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggaggacctttccgattccggtggcggcagttcagcacatctagggccagtggtacaa
gtgactgaggttcgcttaccactagtaccctgccctatgcgcttggtggagtggaaagta
aaacctggagcattggttaacgttgattctgttgtcgcagtatgtgtagcgattcccacg
aagtcagagtctggatcagaagaacgaggccgaacaaaaaatctacctgagaggaaggta
aaatcagaccgagctggagttgtgagagaactgtgttacgagctcgggcagatcatatct
tctggagatgttattgcaaaaatagaagaatgcagtcatcccatagtaatgaagggtctg
tgtgctgaatgtggtctggatttaactcagctacagagcagaaatggaaagcagcaggta
cctgtctctacagcaatggtttccattgtacacagtgttcctgagttaatggtcagctca
gagcaggcggagcagcttggcagggaagaccagaagaggctccacagaaataggaagtta
gtgctcatggtggatctcgaccagactttaattcacaccacagaacaacactgccaacgc
ttgtcaagcaaaggaatcttccattttcgattgggaaggggtgagcccatgctgcacaca
cgtcttagaccgtattgcaaagagtttttggagaagatttccaagatgtatgaactgcat
gtcttcacacttggaagtcgcctttatgcacatactattgcaggttttttggatccagaa
aagaaacttttttcacacaggattctttcaagagatgagtgcattgacccattctctaaa
acaggaaatctaagaaatttgtttccttgtggtgattccatggtgtgcatcattgacgat
agagaagatgtttggaagtttgctcctaaccttgtaacagtgaaaaaatatgtctacttc
aagggaacaggtgacattaatgccccacctggatcaccagaggtgcaaatggccaaaaaa
actacaggtaacttttctagccaacctgtagagagctcagactcatccaaaacattggga
cacgacgagaagcacagttctggtaaaccaggatttcaagctattgaaaatgaagaacag
ctctcaaaaactagaacgctcaaacaaacaaaattagataagcacgactgcagtataaaa
tcagttgaaggaaatgaaacagaagaagctctgtttaataaaaaggagagtctttctgac
cttgataacagctgtgctgacaagaaagaagcagagactgagtctcaaaatagtgaaaat
tcaggtgtcaatatgggggaggagtctttagatcacagtatggttgatgaggaagaggaa
aatgacactgaccaggatgatcatttaatttaccttgaagagatcttgacacgtattcac
aaagaatattttttgcgctacgagtcctacatccaaggggaatgtactgaggtgccagac
attcgaaaaattgtcccggagttaaagagcaagaccttgtcaggcaccaccattgtgttc
agtggtttataccccacaaactatcccatggagcgaacacgagagagttaccatgccaag
acactgggtgccattattggtaagagtctggtcctggatgccaaagatccctcctgcacc
acccatcttattgctgcacgtgcaggaacagagaaggtccggcaagcccaggcctgtaag
catctgcatgtggtgaatccagattggctgtgggaatgtttggagcgttgggaaagagta
gaagagaagctgtttccacttaaagagagctacaacaaatcacagagaagtaacagccca
atagcatttcctgatgttcaagaaatcttcccagcaccagtgatgcatcctgttctcatt
cagagcaaagtttctagaaccccagaagtgcgcacgtatgatgctgtaactggaaaattg
attcgccgaaccgcccatcatctttcctgcaaacagcctcaaagcacacctgtgacacac
tccaggcatgaagaacatttcaatttaaggcattcaggttcacagcagcaaggcaactta
aacagctcaggtccagaagatgagcagcctggattatcacgcaggaagaggcagccaagt
atgtctgaaacgctgccgctctacacactctgcaaggaggaccttgacagtatggacaaa
gaggtgaatgacattcttggagaggaaagtgataatgaaagtgacgaaaaaggacacgat
gtaagagtcaggggagaagatgaagatcagtcaaatataagcagcgtgattactattcca
ggggatcaccagcaggccctgggtacattcgtcgaggacacacggctaacactatttagt
gatgacatcagtctgactgagaaaatgccaagggggcacaaaaggaaactacaggaagcg
aaaaaggacgaagatgttgatgacaatgatgtacagttgactagtcagcacagtaaggat
tctaatgaggatgagggtagtagctcagaagcagatgagatggctgctgccctggaggca
gaattaaacgactttatgtga
DBGET
integrated database retrieval system
