Trichomycterus rosablanca: 134330463
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Entry
134330463 CDS
T09921
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134330463 (rnf180b)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134330463 (rnf180b)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134330463 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
134330463
NCBI-ProteinID:
XP_062867677
LinkDB
All DBs
Position
16:28598263..28611650
Genome browser
AA seq
430 aa
AA seq
DB search
MACSYTAGASGRVGIREELSILRCRRCRRCVLDSTCLLSGLDDLMAECTVWHVDHDASPD
WILTVIDQVHWTVGKLNCQHCGARLGGFNFLNRSKCPCGRDTSVHLSKSRVDLGFKRPVH
PSRPGVAAGRAECKDKVLRAPADENFPQTQATRCSNPPLLPHAPHIPTDEELQLLRTAAP
QELGEEPRSHASVAEHNGPEPTGRLENVESGLRASPRRTGTQEQEPQSEFSSGSVLTMTK
REKNRMKSLRRKQRKKERWMQRQLEEKEQDEDGNLTGSDDDQKEGYTCAVCLDVYYKPYM
CQPCSHVFCEPCLRTLAKNRSDRTPCPLCRTLVSHVLFQEELHRRVSTYFPRDYRSRKKT
FQNANYSKWPLPNCPKHLHMLWGLHRPGASAGRWQLAFRAWILEGLDVGRWLDWIITVII
VSWVLLYIIM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttcttatacggccggagcatcgggccgtgtaggaattcgagaggaactttcg
atccttcggtgcaggagatgcagaagatgtgttttagactcgacatgcctgctttctgga
ttagatgatttgatggccgaatgtacggtgtggcacgtggatcatgatgcatcacctgac
tggatcctgacagttatagatcaggtgcactggacagtagggaaactgaactgtcagcac
tgtggagctcgtctgggaggtttcaattttctcaaccgttccaaatgcccctgcggacgc
gatacgagcgtgcatcttagcaaaagcagagtcgatctgggtttcaagcgtcccgtccac
ccgagcagaccgggcgtggctgctggacgtgcagagtgtaaagacaaagtgctcagagcg
ccggcagacgagaactttccacagacacaagccactcggtgcagtaaccctcccttattg
ccacacgcgcctcacattccaacagatgaggaactgcagcttctgaggacggcggctcct
caggagttaggtgaagaaccacggagccacgcgtccgtcgcggaacataacggacccgag
ccaacaggacgtctggagaacgtagagagtggactgagggcatcgcctcggcgcacagga
acgcaggaacaggaaccacagagcgagttcagctccggatcagtgctgacgatgaccaag
agggagaagaatcgcatgaagagccttagaaggaagcagaggaagaaagagcgctggatg
cagagacagctggaggagaaggaacaggatgaagacgggaatctgacgggcagtgacgat
gaccagaaggaaggctatacctgcgccgtgtgtctggacgtctactacaagccgtacatg
tgccagccctgcagccatgtgttctgtgagccctgtctgaggactctggccaagaaccgg
tcggacagaaccccctgcccgctgtgcaggaccctcgtatcgcacgtcctcttccaagaa
gagcttcaccggagagtcagcacttacttccccagagattaccgctccagaaagaagacg
ttccagaacgccaactattccaaatggcctctgcccaactgtccaaagcacctgcacatg
ttatgggggttgcatagacccggagcctctgctggacggtggcagctcgcgtttagagct
tggatactggaaggactggacgtgggaagatggctggactggattattactgttattatt
gtcagctgggtgctgctctacattatcatgtga
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