Trichomycterus rosablanca: 134330496
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Entry
134330496 CDS
T09921
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b
KO
K09444
interferon regulatory factor 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134330496 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134330496 (irf1b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134330496 (irf1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
134330496
NCBI-ProteinID:
XP_062867725
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All DBs
Position
16:10771126..10774183
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AA seq
309 aa
AA seq
DB search
MPVSRMRMRPWLESKIDSNTIAGLVWVDKEKKMFSIPWKHAARHGWEMDKDACLFKQWAI
HTGKFKPGISEPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCAAVRVYRMLQVVKNKAK
RSSKSQDGRRRRKVPKVKKIDADETSTEEHLYTHDHEDRITQENTVDSTENLNTASPTFD
VPDCSGYEEEIGPDSTNDLYSGRFQVSPLHTTDYEEKAIVELTQQLELDSLQWLQSNSSG
KGFLGNEVTMTESYHSPASQWSDNSGEELELRFYTELIPGLPSEDLLSYTDAWNNNQHTT
GLPQISCLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtcaagaatgcgcatgcgaccctggctggagagcaagattgactccaacaca
atcgctggacttgtttgggttgacaaggagaaaaagatgttctccattccctggaagcat
gctgcacgccatggatgggagatggacaaggatgcatgtctgttcaaacagtgggcaata
cacacaggcaaattcaagccaggaattagtgagccagaccccaaaacatggaaagccaac
ttccgctgtgccatgaattcactgccggacattgaagaagtaaaggacaaaagtatcaac
aaaggatgtgcagccgtgcgtgtctaccgtatgcttcaggttgtcaaaaacaaggccaag
aggtcatcaaagagtcaggatggaagaaggaggagaaaggtaccaaaagtaaaaaaaatt
gatgcagacgagacatcaactgaagaacatctttacactcatgaccatgaagacagaatc
actcaggaaaataccgtagacagcactgaaaatctgaacacagcaagccctacttttgat
gttcctgactgctccggttatgaagaagaaattggccctgacagcacaaacgatctctac
tctggcaggttccaggtttcaccacttcacacgacagactatgaggaaaaagctattgtt
gagctcacacaacaattggagcttgacagtttacagtggctacaaagcaatagcagtgga
aaggggttcctgggcaatgaagtaaccatgacagaatcataccacagtccagcgagtcaa
tggagtgacaactcaggagaggagctcgagctacgtttttataccgaactgatccctggc
ctgcccagcgaagacctgctcagctacacagatgcatggaataacaaccagcacacaact
ggccttccacaaatcagctgtctcctttga
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integrated database retrieval system
