Trichomycterus rosablanca: 134330514
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Entry
134330514 CDS
T09921
Symbol
hnf1bb
Name
(RefSeq) hepatocyte nuclear factor 1-beta-B isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134330514 (hnf1bb)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134330514 (hnf1bb)
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Motif
Pfam:
HNF-1_N
HNF-1B_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134330514
NCBI-ProteinID:
XP_062867747
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Position
16:19023294..19037323
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AA seq
523 aa
AA seq
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MFTDMVSQLTALQQELLNALLDSGLTKELLVQALHDLDPRPPSFPIKTEKPLSPASANGG
SDSDSKPVYLTLQGRGSKVSGDEGSDSGEDFDTPPILRELQSLNTEEAHEQRAMVERMLA
EDPWRAARTIKSYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTTKRAALYTWYVQK
QREIDRQFDCVQGSDPSDSGSQDQVLFFFPEFHHGGQNSGAVTGSQADDGVPGSKRVRRN
RFKWGPASQDILYKAYERQKNPSKEEREALVEECNRAECVQRGVSPSKAHGLGSNLVTEV
RVYNWFANRRKEEAFRQKLAMDTYPVHGLNPLLSSTNSHHHHSSPDTKLRYSQQGSSDVT
STTIGHLGNSQSVLQQVSPSGLDSCHSLLSPEAKMISASGGVLPPVSTLTNIHSLSQSSH
HHQQAQSLIMTFAAQSLGAPPSQNVPIINSVSGLTALQPMHFSHSPGLTPLTTAHPSQQS
YTHSELYSPKQEPPQYSHVSRFSPMETSTISLGSSKQCPLQAW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgacatggtgtctcagttaacggctcttcagcaggagttactaaacgcattg
ctggactcgggactcaccaaggagctgctggttcaggcgctgcatgatctagacccgcgt
ccccccagcttccctatcaaaaccgagaaacctttatctcctgccagcgcaaacggtggc
agcgattcggattcgaagccggtgtatctgaccctgcagggcagagggagtaaagtgtcc
ggggatgagggctcagattccggggaggacttcgacacgccgcccatcctgagagaactg
cagtcgcttaacaccgaggaggcgcatgaacagcgcgccatggtggagcgcatgctggct
gaggatccgtggcgagcagcacgcaccattaaaagctacatgcagcaacacaacattcct
cagcgtgaagtggtggatgtgacaggcttaaaccagtctcatctttctcaacacttgaat
aaaggaacacctatgaaaacaaccaaacgtgcagcactgtacacctggtatgtccagaaa
caacgagaaattgaccgccagtttgactgtgttcagggctccgatccaagtgattcaggc
agtcaggatcaggtcctgttttttttcccagaattccaccatggtgggcagaactctggt
gctgtgactggatcacaggcagacgatggcgtgccgggttccaagagagtgagacggaac
cgcttcaaatgggggccagcttctcaggatatcctgtacaaggcctatgagagacaaaag
aaccccagcaaagaggagagagaggcactggtggaggaatgcaacagggctgagtgtgta
cagaggggagtatcaccctctaaagctcatggtctcggctccaacctagttacagaggtt
cgcgtctataactggtttgctaacagacgtaaggaggaggctttccgacagaagctggcc
atggatacgtatccagttcatggtctgaaccccttgctgtcttccacaaacagccatcac
caccacagcagcccagacacaaaacttagatacagccagcagggaagcagtgatgtcaca
tcaacaaccattggccatcttggcaatagccagtcagtgctgcagcaggtgtctccgtct
ggcctggattcctgtcacagccttctgtcacctgaagccaagatgatctcagcttcaggt
ggagtcttgcccccagtaagcactttgaccaatattcacagtctgtcccagtcctctcac
catcaccagcaagcccagagtctgatcatgacgtttgctgctcagagcttgggtgccccc
ccatctcagaatgttcccatcattaacagcgtatctggcttgacagcgctacagccaatg
catttttcgcatagccccggactcacgccgcttaccaccgcacacccctcccagcagtcc
tacacacacagtgagttgtactcgcccaagcaggaacctcctcagtactcacatgtttcc
cgattctcccccatggaaaccagtacaatctctttaggctccagcaagcagtgtccattg
caggcttggtga
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