Trichomycterus rosablanca: 134330554
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Entry
134330554 CDS
T09921
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134330554 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134330554 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134330554 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134330554 (vtnb)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134330554 (vtnb)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134330554 (vtnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
134330554
NCBI-ProteinID:
XP_062867805
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Position
16:complement(19106305..19115167)
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AA seq
445 aa
AA seq
DB search
MKFVVFLLLAVATAFAAEDSCDGRCQSGFDPTQKCQCDTMCKYYESCCVDFDTTCRTKIA
RGDTFEISEDLTLESNSTVNTNEYNNKDPAPDSNAEICSGQAFDAFLQMKNGSIYAFRGE
YFFELDEKAVMPGYPKLIKDVWGIPGPIDAAFTRINCEGKSYIFKGNKYWRFDGHVLDPG
YPRNISVGFDNIPDDVDAAIALPAVGHRKKEKAYFFTGSMYYQYEFKHQPSHEECNNMLK
SSPSVMFTHYTDVYCDFDLNDLFNLIFRGTPGHHTGPGFINIDWQGIKPPVDAAMLGRLY
VSDYREIPSSSSAPSVEKSRGRTRGGHRRKTKNKRVRVSRSTFWEDLGLDYEERYFGAQM
RNKKKHHSRRPSLFDYIYDSMESDETQNIGQIKGTPMQNVYFFQKDKYYRVDLKSKRIDY
ADPPYPRSIAKYWLGCKEEDLAEKR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtggtttttcttttgcttgcagtggcgacagcttttgcggcagaagattca
tgcgatggacgttgccagagtggttttgaccccacacaaaaatgccagtgtgatactatg
tgcaagtactatgaaagctgctgtgtggattttgacactacatgccgaacaaagattgcc
cgtggagacacatttgaaatttcagaggatctcaccctagaatcaaattcaacagtaaat
accaatgagtacaacaataaggacccagctccggactctaatgcagaaatttgcagcgga
caagcatttgatgcatttttgcagatgaagaatggatccatctacgccttcagaggtgaa
tacttctttgagctggatgaaaaggctgtgatgccaggctatcccaaactcataaaggat
gtgtggggcatccctggtcccatcgatgctgcctttactcgaatcaactgcgaagggaaa
tcttacatattcaagggtaacaagtactggcgtttcgatggtcatgtccttgatccaggt
tacccaagaaatatctcagtggggtttgacaacattccagatgatgttgatgctgcaatt
gctctacctgctgtgggccaccgcaaaaaagagaaagcgtacttctttacaggttctatg
tattaccagtacgagttcaagcaccagccgtctcatgaggagtgtaataatatgttaaag
tcctctccttctgttatgtttacccactacactgatgtgtactgtgacttcgacctaaat
gatttgtttaacctgatcttccgaggcacaccaggacaccatacaggcccaggttttata
aacatagactggcaaggaatcaaacccccagtagatgcagcaatgttgggccgactatat
gttagcgactatagagagataccttcttcctcatcagcaccttctgtagaaaaaagtcgt
ggaagaacccgaggtggtcacagaaggaaaaccaagaacaaaagagtcagagtcagccgc
tccaccttctgggaagatctagggttggattatgaggaaaggtattttggggctcaaatg
cgaaataagaaaaaacaccatagcagacgtccatctctttttgactacatctatgattcc
atggagtctgatgaaacacagaacatagggcagattaaaggaacgccaatgcaaaatgtc
tacttctttcagaaagataaatactacagagtggatctgaagtccaagaggattgattat
gcagaccctccctatccaagatccattgccaagtactggctgggatgtaaagaggaggac
ctggcagagaaaagataa
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