Trichomycterus rosablanca: 134330704
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Entry
134330704 CDS
T09921
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134330704 (ddx10)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134330704 (ddx10)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
Helicases
134330704 (ddx10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SNF2-rel_dom
PAS_11
Motif
Other DBs
NCBI-GeneID:
134330704
NCBI-ProteinID:
XP_062868007
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Position
16:complement(24977073..25024682)
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AA seq
843 aa
AA seq
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MRTKKGNEKKQDPVKNFEKWKKKYEKTKKLSKKPRRKTEWETERENIQKLVAKYAEINPK
EAVKFSDFPLSRKTLQGLMEAQYRQPTEIQRQTVGLALQGKDILGAAKTGSGKTLAFLIP
VLECLYRNQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDIKDESM
KIHRTNIIICTPGRLLQHMDENSSFHATDLHMLVLDEADRILDMGFADTLNAIIENLPKT
RQTLLFSATQTKSVKDLARLSLKDPEYVWVHEQAKFSTPATLEQSYVVCELHDKVNMLFS
FLKSHLQKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYNDFIRKKS
AVLFATDIAARGLDFPAVNWVLQFDCSEDANTYIHRVGRTARYKEGGEALLILLPSEEKG
MIAQLQEKKVPINKIQVNPEKLMCVHQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNK
DVFDVFQLKLSEYAMSLGLAVAPRVRFLNKAQKQREGAALEVSTAADSDSDDELKSFKAQ
LRLEKPSKSDSASEEEEEGEEDTDEEEESDDDEKVKPGELLGGTDDDDEDEDLRDMDLLT
VKRKNVFNVSDEDEELQDAISKNKKVSKASEAKKAQKKKFKLNTKKVFTEDGEIVQQWPP
LQRTVVSDEEDDEDIAGINVEAAKERLRREDQEFDKKEYSRRIKEKHREKRLKEKAERRE
ASKRAKEEKKRKAGGGEQDEDDEDDEEETVAYLSGADEDFDPSTLPGPDKVYRSEDEDEE
SNGPELAGRKRAHSSSEDDYDEEHWGAGRKKSKQHSSEAKPLDTGLSLVEDEELVLHLLG
NRS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcggactaaaaaaggaaacgagaagaaacaggaccccgttaaaaactttgaaaaatgg
aagaagaaatatgaaaagacgaagaagctgagcaaaaagccgaggagaaaaacggagtgg
gagacagagagagaaaacatacagaaactagtagcgaaatacgcagagataaatccaaaa
gaagctgtgaagttttcagattttccactttcaaggaaaactctacaaggtttgatggag
gctcagtatcggcagcctactgagatccagagacagaccgttggtttagctctgcagggg
aaggacatactgggtgctgccaagacgggttcagggaaaactttagcctttctcattcct
gtcctggagtgtttatatcgtaatcagtggacagctatggatggactgggtgctctcatc
atctctcccactagagagctggcttatcagacgtttgaggtgctgagaaaagtgggcaag
aatcacgagttctcagctggtctggtcattggtggaaaggacatcaaagacgagtcaatg
aagattcatcgcacaaatattatcatctgcactcctggacgtttgctgcagcacatggac
gagaattcttctttccacgccacagacctgcacatgctcgtactggatgaagcagacagg
attttggacatgggttttgcagacacacttaatgccattatagaaaaccttcccaaaacc
aggcagacgctgctgttctccgccacgcagaccaaatcagtgaaggacctcgccagactg
agcctgaaggaccccgagtatgtgtgggttcatgaacaggctaaattcagtacaccggct
actttggagcagagctatgtggtgtgcgagcttcatgacaaggtcaacatgctcttttca
tttttgaaaagtcacctgcagaagaagattattgtcttttttgcttgctgcaaagaggtg
cagtacctgttccgggtcttctgccggttacgacctggtatttcagtgctggcgctgcat
ggaaagcagcagcagatgaaaagggtggaggtctacaacgacttcattcgcaaaaaatct
gctgtgctgtttgctacagatatcgctgcaagaggccttgacttcccggctgtgaactgg
gttcttcagtttgactgttctgaggatgccaacacatacatccacagagtcgggagaaca
gccaggtataaggagggaggagaggctctgctcatacttttgccctcagaggaaaaaggc
atgattgctcagctacaggagaaaaaagttcctatcaacaaaatccaggtgaacccagag
aagctgatgtgtgtgcaccagaagctcgaggcctttttggcacaagagaaggagcagaag
gagcgagctcaaaggtgttttgtgtcctaccttcgttctgtctatctgatgaagaacaaa
gacgtctttgatgttttccagctcaagctctcagaatacgccatgtctctgggtctggcc
gttgccccacgggtacgtttcctgaataaagcccagaaacaaagggagggggcagcgctg
gaggtcagcactgcagcggattcagactccgatgatgagctcaagagctttaaggcccaa
ctcagattagaaaagcccagtaaatctgactctgcgtctgaagaagaggaggagggggag
gaggatacggatgaagaagaggagagtgatgatgacgagaaggtgaaacctggagaactg
cttgggggcactgatgatgatgatgaggatgaagacctgagggatatggatctgctgaca
gtcaagcgcaaaaatgtttttaacgtcagcgatgaagatgaagaattacaggatgccata
tccaagaacaaaaaagtttccaaggcctcagaggcgaagaaagcacaaaagaagaaattc
aagctgaacaccaagaaagtcttcacagaggatggagagattgtgcagcagtggcctcca
ctacagaggaccgtggtgtcggatgaagaggacgacgaggacatcgcaggtatcaatgtg
gaggcggcaaaggagcggttgcgcagggaggatcaggagtttgacaagaaggaatacagc
aggaggattaaagaaaaacacagggagaaaaggctgaaggagaaggcagagcgaagagaa
gccagcaaacgggccaaagaggagaagaaaaggaaagctggtggtggtgagcaggatgag
gatgatgaagacgacgaggaagaaacggtggcatacttgtcaggtgctgatgaagatttt
gaccccagtactctgcctggtcctgataaagtgtacagatcagaggatgaagatgaggaa
agtaacggtccagagcttgccggacgaaagagggcacacagcagcagtgaagatgactac
gatgaagaacactggggggcagggagaaagaaatccaagcagcacagctcagaagccaaa
cctctggacactggactctctctggtggaggatgaagagttggtgttgcatctgctgggc
aaccgaagctag
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