Trichomycterus rosablanca: 134330709
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Entry
134330709 CDS
T09921
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134330709 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134330709 (nfrkb)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
134330709 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
134330709
NCBI-ProteinID:
XP_062868013
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All DBs
Position
16:24880032..24897627
Genome browser
AA seq
1293 aa
AA seq
DB search
MDSLDHMLTDHLDSGMDSSNYVMEECMLGNCRVRIPEDFLEDPEIFFSVMSESTWSEVLT
DSQRQHLRQFLPHFSENNTSEQDQVISDLFNNQNFHFGNPLHLTQKLFRDGCFNPEVVKY
RQLCTKSQRKRQIYSLQQYYHNLLKQILVSRKELLDLAVRSGPELPVKRHYPLSSQKELR
DQRVRHRVNRILREVKTECGDTNLSSDDDDAGSWFAEPTSPSSPTPTISLRVLPSLSTQD
MKTIDKPELGEKDLKAMLRRHREKRKHQPDHPDLMTSDLHLGDVTSRVNIGRKGSSMALI
DLALPRKKLKEEKKKRKMRPIKTESDDGCDGPTPAASVPAALSETPNPLQSIKEEVIEES
QSSPNTVQEIAMSFFHLLEDIFKQDNMASSSQIEEKVQQWQGSPASALNPWFSVSPCWCE
LIVSALQFLAGESKSGSMVLPSGFTPYVEFRELSQQWKWIGSSQDTEKDLGALCGLWLES
KDQVVIKQEGEEAAELTPPAPRVWTDYVVRPSTGEERNVFQEQEQQRYDQPHKAFTFRMH
GFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEIC
ELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFER
IHQAQAAAAKARKALQQKPKPTPKPKSSNKEPVVKSGAAEAQSSVSESVSTPATILPPPP
STPTPSTPVTPKSTLPIVSTPTKAGVPDPVKSSPSVLLVSPPTMPQLGTLLSAAQVTPQT
SQQAPVQPAARVVSHSVSAGSLPQVRVVTAQPGLSTASAGQAATLIHHQTPHHIRLPVSV
AHSKGIAQAVVTLPLRSQSTGSPIQVQASRAQTSLSVPRLTSAVPVSKAQSSFPGSPATN
TPPPAVLQGITSQNIIKQVAITGQLGVKTQNTAGIPLTATNLRIQGKDVLRLPPSSITTD
AKGQTVLRITPDMMATLKLTPDILTSASSSTAKGISATLHVTPPQAPPSASSNPAPLAKA
ETLTAKPPQTLVPPGTATLVKATCDTAIRLMPALAVTMADPKARTFSTVTSSDSKLGSTT
IRIVPSLGVISQKQGQTVAVTTTCAKPGTASSGAATVTIATSGVAGGKGVTLATSAAGST
LSLGTAAATVRQVPVSATVVATQPGKLPTRITVPLSVLSQPLKSKSVVTTPILKGNISTN
ISNLGRNIILTSMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQSHS
VSSSPKSAVSTVVVSSAPSAPSALSTKTNPEPQ
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggattctttggatcatatgctgacagaccatttagactcaggcatggacagctctaat
tatgtaatggaggagtgcatgctgggaaactgcagagttcgtattcctgaagattttctg
gaagatccagagattttcttttctgttatgagtgaaagcacctggtctgaggttctaaca
gactcgcagagacaacatcttcgtcagtttctgccgcacttttcagagaataacacttca
gagcaggaccaggtcatcagtgacctcttcaacaaccagaacttccactttggaaatcct
cttcacctcacccagaaactcttcagagatggctgctttaacccagaagtggttaagtac
aggcaactctgtaccaaatcccaaagaaaacgacaaatctactcactccagcagtactac
cacaatctacttaagcaaatccttgtttctagaaaggagttgctggatctggctgttcga
agtggtcctgagctgccagtgaaacgtcactaccctctttcctcccaaaaagaattgcga
gaccagagggtcaggcacagggtaaaccggatactgcgagaggtaaaaactgagtgtggc
gacaccaacctatcctctgatgatgatgacgcgggatcttggtttgcagagcccacatcc
ccttcttctccaacaccaaccatttctctcagagttctgcccagtctctccacccaggac
atgaaaactatagataagccagaactgggagagaaggatttaaaagccatgctgagaaga
cacagagagaaacggaaacatcaaccagatcatcctgacttaatgacatctgaccttcac
ttaggcgatgtcacatcaagagtaaacatcggccgaaaaggatcaagcatggcactgata
gacctggccttgcctaggaagaagctgaaggaggagaaaaagaagcgaaaaatgaggccc
attaaaacagaatccgacgatggctgtgatggtccgacaccggcggcctctgtgcctgct
gccctctctgaaactcccaaccctcttcagagcattaaggaagaagttatagaggaatca
cagagcagccctaatactgtgcaggaaatagccatgagcttctttcatctactggaagat
atctttaaacaggataacatggcatcctcttcccagatcgaggagaaggtgcagcaatgg
cagggctctcctgcaagtgccctgaacccatggttctctgtgtccccctgctggtgtgag
ttgatagtttctgctcttcaattcctagcaggggaaagtaagtctggctccatggtgctg
cccagtggcttcactccttatgtagaattcagagagctcagtcagcagtggaaatggata
ggatccagtcaggatacagagaaagatctcggtgcactttgtggcctctggctggagtca
aaggaccaagtggtaattaagcaggaaggtgaggaagctgctgaactgactcctccagct
cccagagtatggactgattatgtggtcagacccagcactggtgaggagcggaacgtcttt
caggagcaggagcagcagcgctatgatcagcctcacaaagccttcaccttccgaatgcat
ggcttcgagtctgtggtggggccggtcaagggagtttttgataaggagacttcactgaat
aaagcccgagagcactcacttctgcgctctgacaggccagcctatgtcaccatcctctct
ctggtgcgcgatgcagctgcccgtctgcctaatggtgaaggtacccgagctgagatctgt
gagctgctgaaggattctcagttcctggcacctgatgtcaccagtgcccaggtgaacact
gttgtaagtggagctcttgaccgtctgcactatgagaaggacccatgtgtgaaatatgac
attgggcgcaagctctggatttacctgcacagagaccggagtcaggaggagtttgagagg
atccaccaggctcaagcagctgccgccaaggcacgaaaagcccttcagcagaaacccaaa
cccacccccaaacctaagtccagcaacaaggaaccagtcgtcaaaagcggagctgcagag
gcccaaagttcggtgtctgagagtgtttctacacctgctacaatcctacctccaccccct
agcaccccaacaccaagcacccctgtgacccctaaatccacactacctattgtgtctaca
ccaaccaaagccggagtgccagatccagtcaaatccagcccaagtgtcctgctggtgtct
cctcccaccatgcctcagctcggcactctactatctgctgctcaagtgactccacagacc
tctcagcaggccccagttcagcctgcagctcgagtagtgtcacactcagtgtcagcgggc
tctctgcctcaggtacgggtggttactgctcagcctggtctttccactgcatcagcagga
caagcagccacactgatccaccaccagaccccccaccatatcaggctgccagtcagtgtt
gcacacagcaagggcatcgcacaggctgtggtgactctgccactgagaagccagtccaca
ggaagtccaattcaggttcaggcctcacgagctcagaccagtctctctgtaccacgcctg
acctctgctgtgccagtcagtaaagctcagagcagttttccaggaagcccagctaccaac
acacccccacctgcagtgctgcaggggatcactagtcagaacatcatcaaacaggttgcc
attactggtcagctaggtgtgaagacccagaatacagcgggcattccgctgaccgccacc
aacctgcgcattcaaggcaaagacgtgctccgcctgcccccgtcctccatcactactgat
gctaaaggtcaaaccgtgctccgcatcaccccagacatgatggcaactctgaaactcaca
cctgacatactcaccagcgccagcagctccaccgctaaaggcatctccgccaccctgcac
gtaaccccaccgcaggctcctccttctgcctcctccaaccctgcccccttggccaaagca
gagaccttgactgccaaaccccctcaaaccttggtgccacctggcactgccacactggtc
aaggccacatgtgacactgccattcgactcatgcccgccctggctgtcactatggcagac
cccaaggcccgcaccttctccacagtcacttcgtctgactccaagcttggcagcacaacc
attcgcattgtgccaagtctgggtgtgatatcacagaaacaggggcagaccgttgctgtc
accaccacatgcgccaagcctggtacagcttcctcaggggcagctacggttaccattgca
acaagtggggtagcaggaggtaaaggggtgacactggccacttccgcagcagggtcgact
ctttcactgggaactgccgcagccacagtcagacaagtgcctgtcagcgcaactgtagta
gccacgcagccggggaagttacctacaaggatcacagtgcctctttcagtccttagccag
cctctgaaaagcaagagtgtggtgactacaccaatactgaaaggaaacatcagtaccaat
atcagtaatctgggcaggaatattattctcaccagcatgccagcaggcaccaaactgatt
gctggaaataagccggtcagcttcgttacagctcagcagttacagcagctgcagcagcag
ggtcaggccactcaggtgcgcatccagactgttccagcccagcaactgcagtcgcactca
gtatccagctcgcctaaatccgcagtgtccacagtggtggtgtccagtgccccctctgcc
ccctcagccctgtccaccaaaacaaaccctgagccacagtga
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