Trichomycterus rosablanca: 134330772
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Entry
134330772 CDS
T09921
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
trn
Trichomycterus rosablanca
Pathway
trn03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
trn04514
Cell adhesion molecule (CAM) interaction
trn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
134330772 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134330772 (ncam1a)
04517 IgSF CAM signaling
134330772 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134330772 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134330772 (ncam1a)
04090 CD molecules [BR:
trn04090
]
134330772 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134330772 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
134330772 (ncam1a)
04091 Lectins [BR:
trn04091
]
134330772 (ncam1a)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
134330772 (ncam1a)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
NCAM1/2
134330772 (ncam1a)
CD molecules [BR:
trn04090
]
Proteins
134330772 (ncam1a)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134330772 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
Others
134330772 (ncam1a)
Lectins [BR:
trn04091
]
I-type lectins (Siglecs)
134330772 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
C2-set_3
V-set_CD47
C1-set
Ig_PDGFR_d4
Arylsulfotran_N
Sp38
VEGFR1-3_N_Ig-like
Yos9_DD
Motif
Other DBs
NCBI-GeneID:
134330772
NCBI-ProteinID:
XP_062868092
LinkDB
All DBs
Position
16:26116284..26504740
Genome browser
AA seq
978 aa
AA seq
DB search
MLQIRILICTVLLLPHAASLQVEITPAYGEISVGESKFFSCNVIGDVTGIEWFTPNGDKV
QENRQDVTVSNNDNSESTLIIYSATVDNAGIYKCVARYKDKEAQATVNINIYQKLTFVNA
PSPQEFNEGDDADIVCDIVSSPPPTVNWKYNNIKIQPEKDVRFEVPGNNHLQIHGIKKTD
EGNYTCEGRIMARGEIALRIIKVVVNVLPSIRTRHTELNATADIGQAVTLACYADGFPEP
TVTWLRNNVVLMADEKYSLNDDGSELTIKDVTKVDEEDYTCIARNKAGEKQKEISLKVFV
QPKITFLENRTASELEEQAVLTCEATGDPTPSIVWSFGRRVFSEGEQSLDSNVVVRSDAR
ISSLTLKHVQFTYAGQYLCTARNPIGQDIQSMYLEVRYAPKIQGTVSVFTWEGNAANLSC
EVLAHPSASVVWTREGQQLPALNATNVKIYNTPIASYLEVTPESQSDFGAYNCSATNAIG
SDSKEFVLIPADVPSAPVIDRVVPYPSTAMVEFDEPEANGGVPVLKYKVEWRRENQDWTS
KVYEAEEGQTYITIVGLKPETKYEVRMSAINGKGEGESCATESFQTQPVREPNPPKLEAR
QESIGNKLRINWIKQDDGGSPIKQYLVRFRPKHRSDWMQEMSLPNGSEFVVLRGLEWNTE
YEVHVVAENQQGRSQPGVLSFRTSEEPTVTPDLVASDSGLGTGAIVGILLVVFILLLICV
DVTCYCLNKCGLLMCIAVNFCGKAGPATKAKDIEEGKAAFSKDESKEPIVEVRTEEECTS
NHEGGAPTEPNETTPLTDPEHAADTTATVVDLLPSLTTNSEQVTDSPASKSTTLNSSTTP
GLEPNAPKASTTSPTSTPADTPLVDLSDGLSSKVSQPSGTPNSVPPSSNPKAPAAKNTTD
GVQNPAVQVDGKTLASDADQVKNAVDSNSTSAPVNRDNGKIVEDGKIKAPETEVKTPVAE
VKAVPNEAPQTNSNESKA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatacggattctcatctgcaccgtgctgctgcttccacatgcagcctcactg
caggtggagatcacaccagcctatggagaaatcagcgttggagaatccaagttcttttct
tgtaacgtgattggtgatgttacgggtatagaatggttcacccctaatggagataaggtg
caggaaaacagacaggacgtcactgtgagcaataacgacaactccgagtccacgcttatc
atctacagtgccaccgtggacaacgctggcatctacaagtgcgttgccagatataaggac
aaggaggcccaagccacggtcaacataaacatctaccaaaagctgaccttcgtgaatgcc
ccgtcacctcaggagttcaacgagggcgatgatgccgacatcgtgtgtgacatcgtcagc
tctccaccacccacagtcaactggaaatacaacaacataaagattcagcctgagaaagac
gtgcgcttcgaggtgcccggcaacaaccacctccagatccacggcatcaaaaagactgat
gagggcaactacacctgcgaggggcgcatcatggcacggggagagatcgcccttcggatc
atcaaggtcgtcgtcaacgttctgcccagtatcagaacccgtcacactgagctcaatgcc
accgcagacatcgggcaggccgtgacactggcgtgctacgcggacggtttcccagagccg
acggtcacgtggttgcggaataacgtcgtgctgatggccgatgagaaatacagcctgaac
gacgatggctccgagctgacgattaaagacgtgacgaaggtggatgaggaagattatacc
tgtattgcaagaaataaagccggagaaaagcagaaggagatcagcctaaaggtgttcgtg
caacccaaaatcacgttcctggaaaacaggacggcgtccgagctggaggagcaggcggtc
ctgacctgcgaggctacaggcgaccccacacccagcatcgtgtggagcttcggacggcgc
gtcttcagcgaaggagagcagagtttggacagtaacgtggtggtgcgcagcgatgcccgg
atctcctcactgactctgaagcatgtgcagttcacgtacgccggccagtacctctgcacc
gcacgcaaccccatcggacaggatattcagagcatgtacctggaagtacgctacgctcct
aagatccagggtacagtgtccgtcttcacctgggaggggaatgccgccaacctctcgtgc
gaggtactggcccacccgtcagcttcggttgtgtggacccgcgagggccagcagctgcct
gcgctcaacgcgacaaacgttaagatctacaacacccccatcgccagctatctggaggtc
acccctgaatcccagagtgacttcggtgcctacaactgctcagccaccaacgccatcggt
tcagattccaaggagtttgttctgatcccagcagacgtgccatcagctcccgttatcgat
cgcgtggtcccttaccccagcacagccatggtggagttcgatgagccagaggccaacgga
ggagttcctgttctcaagtacaaggtcgaatggaggagggagaaccaggactggacgagc
aaagtgtacgaagcagaagagggtcagacctacatcaccatcgtggggctcaaaccggag
accaaatacgaggtcaggatgtccgctatcaacggcaagggtgaaggagaaagctgtgcc
acagagagcttccagacacaacctgtcagggaaccaaatcctcctaaactggaagccaga
caggagtccataggcaacaagctgaggatcaactggatcaagcaggatgacggtggttca
ccaatcaaacagtatctggtgcgctttagacctaaacaccgctcggactggatgcaggag
atgagcctccctaatggcagcgagtttgtggtgctgagaggtttggagtggaacacagag
tacgaggttcacgtggtggcagaaaaccagcagggccgctcgcagccaggcgtcctttcc
ttcaggacctcagaagagcccaccgtcaccccagacttagtggccagtgattcagggctg
gggacaggtgccatcgtgggcatactccttgtggtcttcatccttctgctcatttgtgtg
gacgtaacctgctactgcctcaacaagtgcggtctgctgatgtgcattgctgtaaatttt
tgcggaaaagccggacctgccaccaaagccaaggacatcgaagagggcaaggcagctttc
tcgaaggacgagtcgaaagagcccatagtcgaggtgagaacagaggaggagtgcacgtcc
aaccatgagggaggagcaccaactgaacccaatgagaccacgccgctcaccgaccctgag
catgctgcagacaccaccgccacggtggtggatttgctcccctcactaaccactaactca
gagcaagtcactgacagtcctgctagcaaaagcactacccttaactccagcaccaccccc
gggctcgaacccaatgcccctaaagccagcacgacctctcctacctccacacctgccgac
acccctctggtagacctgagcgatgggctttcctccaaggtttctcagccctcaggaacc
ccgaattcggtccccccgtcgtctaatcccaaagcccctgcagccaaaaatacaacagat
ggagttcagaatccagccgtacaggtagacggaaaaaccctcgcgtcagacgctgatcag
gtcaagaacgccgtcgactccaactcaaccagtgcaccggtcaaccgggacaatgggaag
atcgttgaagacgggaagattaaagcacctgagacggaggtgaaaacgcccgtggccgag
gtgaaagcagtcccaaacgaagcaccgcagacaaacagcaacgagagcaaagcatga
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