Trichomycterus rosablanca: 134330781
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Entry
134330781 CDS
T09921
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134330781 (exd1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134330781 (exd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
134330781
NCBI-ProteinID:
XP_062868105
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Position
16:30077482..30081845
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AA seq
523 aa
AA seq
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MGSLDDYQFLDSFKRKRIKLTTRLSSFVGVVQRINLNKTLILEQVEELQTGTRLPGAKLF
FGHEILNVEFPSSSKAPDLETEQGDASGVGALPVSEYQPYRRRLMEEDEDDEQWVNYVVV
DEFHEKFGPALMHIRRQQVIGIGADGVGAFHQERLCWLQVATKNKVYLFDILILGARAFK
NGLSAILDSEKILKVVHDCRGIAGCLMAQFEVNLVNVFDTQVADVVHFYNLTGGFLPDRV
STLQEVVSSHLKIPAQSLSSLKIKEQLGMEDKEVWYARPCPAPLLKVMALSVIHLQPLRL
VLLDVLMSDYTNLVDCYLRSAQDEPVRTENIGRTLLELPKELRELETIKKARQTQALNYY
QVTQDGLLKRHGANSGSDPDLQKRAPNPDLDGPSEHGGHFFTSLGSGSVSESFPITTAGP
GRLDRHHANQGSELGLQNPKLDGPPGQSLGRLRLPEGKEITSATAAVPGLGRGLTLPVPA
VVPVQGSAPHKTEDMEGVAQRNLLMPGTHPFPTIGRGLFQRPL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttagatgattaccagtttctggacagctttaagaggaagcgcatcaaactg
accaccaggttgagcagttttgtgggcgtggtgcagcgcattaacctgaacaagaccctc
atcctggagcaggtggaggagcttcagactggcaccagactacccggtgcaaagctcttc
ttcggtcatgagatcctcaacgtggagttcccttcatcttctaaagcaccagacctggag
actgagcagggcgatgccagtggcgtgggcgcactgcctgtgtcagagtaccagccctac
aggaggaggctgatggaggaggatgaagatgatgagcagtgggtgaactacgtggtggtt
gatgagttccatgagaagttcggccccgccctgatgcacatccgcaggcagcaggtgatc
gggatcggtgcagacggagtgggagcgttccaccaagagagactgtgctggctgcaagtg
gccaccaagaacaaggtgtacctcttcgacatcctgatactcggcgcccgggcgttcaag
aacggactctccgccatcctggacagcgagaagattctgaaggtggtccacgattgtcgt
ggcatcgctggctgcctgatggcacagttcgaggtgaacctggtgaacgtcttcgatacg
caggtcgccgatgtcgtgcatttctacaacctgaccgggggtttcctcccagaccgggtg
agcaccctccaagaggtggtcagctcccatctaaagatacctgctcaaagtctgtcctct
ctgaagatcaaagagcagcttgggatggaggataaggaggtgtggtacgcccggccctgc
cctgctccgctgctcaaggtcatggcactgtcggtgatccacctgcagcctctgcgcttg
gtgcttctggacgttctcatgtcagactacacgaatctcgtggattgctacctgaggagc
gcccaggatgaacccgtacgcacggagaacatcgggagaactctactggagctgcccaag
gagctgcgagagctagagaccatcaagaaggcgcgccaaacccaagctttgaactattac
caagttacacaggatgggcttctgaagcggcacggtgccaactcgggttcagatccagat
cttcagaagcgggcgcccaatcctgatctggatggaccttcggaacatggtgggcatttt
ttcacatctttgggaagcggtagtgtatcagagagcttcccgattaccacagctggacca
ggacgtctcgatcggcaccatgccaaccaaggttcagagctaggtctgcaaaatcccaaa
ctggatggaccaccaggacagtctttgggacgattgaggctaccggagggtaaagagatc
acgtctgccaccgcggcggtgccaggattgggcagagggctgacactcccagtgccagca
gtggtgcccgttcaaggaagtgccccacacaagacagaagacatggaaggtgtggcccag
aggaacctcctcatgcctggcacccatccattcccaactatagggcggggactcttccaa
agaccgctgtag
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