Trichomycterus rosablanca: 134330938
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Entry
134330938 CDS
T09921
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134330938 (ric1)
Membrane trafficking [BR:
trn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
134330938 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
134330938
NCBI-ProteinID:
XP_062868296
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All DBs
Position
16:complement(5351476..5392021)
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AA seq
1417 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSSEQPFHIQPSSQRFYFCVLSDTQLSIWFSRPSVLVVSYIESEK
AAAQFGFYQQAEWKPDDSMIAVAAANGYVLLFEIVGGADDKYLYEPVYPKGSTRVKLTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHMLHWDGVCNGRRAVNL
STIPFSLDLQSSRGGPCLALNGIYIREMEYCVTLDGFAVVADDGRLGFITPTANRFSTEH
LQGVWAADVTDGTCVAVNNKYRLMAFGCASGSVLVYMIDNTTGSMQLSHKLELSPKHYPD
IHNKTGPVKMIRWSPDCSVVMVTWLCGGLSLWSVFGAHLVCTLGEDFTCCSDGTHRDPLK
ISCMSWGAEGYHLWVISSTETDSDGSKGLQQASILQFQFIKSALTVNPCTSNQEQVLLHG
EDRLLMTCGDAAVQIHNQEQHAPRSTTHTQLSTLLGHKHWHVVQIHSTYLDTNWPIRFAA
IDSAGQCLVVAGRRGFAHYSLFSRKWKLFGNITQEQSMAVTGGLTWWNDFVVVACYNFID
QQEELRFYLRSSNLDNAFASVTKLHAETLLLNVFRNTVILFRTDCSICLYSVEKKQDSSS
VSVDLLQEVSMSRYIPHPALVVSVTLTSVRTETGITLKTPQQMCNAESILLNLAGQLIML
QRDRSGPQVRDKDSSANQKTLLPFSPPVVLAQCVENVWASSHSGCKKRHLVEALWLSCGE
SGMKVWLPLFPRRENRKPHSFLSRRIMLSFLLDIYPLAVLSEDALVLGAANETLFYDSSF
SHHKEGLGGNSNTKDGLRRSSSFSLSHESLETFFPYCMVERTSQIYLHHLLRQLLVRNLG
EQALLLAQSCSSLPYFSHVLELMVHVVLEEEATSREPIPDPLLPTVAKFLAEFPLFLRTI
VHCARKTEFNLWNYLFAAVGNPKDLFEECIMARDLDTAASYLIILQNMEAPAVSRQHATL
LFNTALEQGKWDLCRNMIRFLKAIGSGESETPPTTPTSQEPSSTGGFEFFRNRSISLSQS
AEVVSTGKFNLQKTFSMPSGPSTKGRESECPENMYIDMMLWRHARCLLEQIRLKDLGCFS
AQLGFELIGWLTRERTRVARVTDFVSALKCLHNDFLWPFPVLPAGSPLKNGRCRTVLSTR
LVASQSNDSLMNNDMEMTPPQVTSTNHNWLDGLKAQPKEIDSTSSHGAPQTQEAFLSPLI
NKTEECSIGSATDLTETSSMVDGDWTMVDENYSALSLSQSELEHISMELANKGPHKSQVQ
LRYLLHVFLEAGCLEWSVVIGLILRDVNVIKQVLGFLDCADSETVQNVQAGLIAIDQWAS
SNCLGYKAFLNLIAPELQKLCDVSVDQVQLDSFQPSVTKLADPVLPRVEEHRVGTTFNHP
MTLESPPGSPPRTIEENGEEETEEEAGEDGAYDCTLS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctgaccggctggccgcggaggcttctgtgcccgctcaagagctccgagcag
ccgtttcacatccagccgagctcccagcgcttctacttctgcgtgctgtcggatactcag
ctcagcatctggttcagcaggcccagtgttttagtcgtcagttatatcgagtcagagaaa
gcggctgctcagtttggattctatcagcaggcggaatggaaaccagacgactccatgata
gcggtggcggctgcgaatggatacgtgctgctgttcgagattgtcggaggtgcagatgac
aaatacctgtacgagcccgtctatccaaagggtagtacacgtgtaaagctcactccaggt
tataaggaggaacaatgtgctcctgctctcagtctggagatgaagaaaccggttgaccta
gaggcccctattaccagtctgcagtctctgcaggaagatctgctggtatgcacggctgat
ggttacctgcacatgctgcactgggacggagtgtgtaacggccggagagccgtcaacctc
agcactattccattctctctggacctgcagtcctcacggggtggtccgtgtttggctctg
aacggcatctacatcagagaaatggagtactgcgtgactttagatgggttcgccgttgtg
gccgacgatggacgactcggcttcatcacgccgaccgctaacagattctccactgagcac
ctgcagggcgtttgggcagcagatgtgacagacggcacttgtgtagcagtcaacaacaaa
tacagactcatggcgttcggctgtgcgagcggctctgtgttggtctacatgatagacaac
actacaggatcaatgcagctgtcccacaaactggagttaagccccaaacactacccagat
attcacaataaaactgggccagttaagatgatcagatggtctccagactgcagtgttgtc
atggtgacgtggctgtgtggaggcctttctctgtggagtgtgttcggagctcatctcgtc
tgcacactcggagaggactttacgtgctgttcagatggcacccacagggatccactaaag
atcagctgtatgagctggggggcagaaggttaccacctctgggtgattagcagcaccgag
acagacagtgatgggtcaaaagggttacaacaggcatcaatcctgcagtttcagttcatc
aagagtgcactcacagtcaatccctgtacgagtaatcaggagcaggtgctgctgcacggt
gaagatcggctgctgatgacctgcggagacgccgctgttcagatacacaatcaggagcag
catgcaccacggagcacgacgcacacacagctcagcactttactggggcacaaacactgg
catgtggtgcagattcacagcacgtatctggacactaactggccgatacggtttgcagct
atagactcagcaggtcagtgtctagtggtggcagggagacgtggatttgcacattattcc
ctgttcagcagaaaatggaaactgtttggaaacattacacaggaacagagtatggctgtg
acgggaggtcttacctggtggaatgactttgtcgtcgttgcctgttacaatttcattgac
cagcaggaggagctgaggttttatctccgctcttctaaccttgacaacgcctttgcaagc
gttacaaagctgcatgctgaaactttgctgctcaatgtgtttcggaacacagtcatcctg
tttcgcaccgactgctccatctgcctttatagcgtcgagaagaaacaggacagttcttca
gtgagtgtagatctactacaggaagtgtctatgtctcgctatattcctcatcctgctcta
gtagtttcagtcacactcacttcagtcagaaccgagactggaatcacgttaaaaactcca
cagcagatgtgtaatgcagaaagcattctgttaaatttggctggtcagctcatcatgctg
cagagagatcgatccggtccacaggtacgagataaggactcatcagccaatcagaaaaca
ctgctaccgttttcaccgcctgtggttctggctcaatgtgtggagaacgtttgggcctcc
agccattccggctgtaaaaagcgccaccttgttgaggctctatggctttcgtgtggcgag
tcagggatgaaggtgtggctccccctgttcccacgacgtgaaaatcgcaaacctcactcg
ttcctctcgcgccgcatcatgctttcattcctcttggacatctacccgctcgctgtactc
tctgaggatgcacttgttttgggtgctgctaacgaaacgctgttctatgactcttcattt
tctcaccataaggagggcctcggaggaaattccaacaccaaagacggactaaggcgcagt
tcatctttttctttgtcacatgagtcccttgagacgtttttcccatactgcatggtcgaa
cggacgtcccaaatctacctccaccacctccttcgtcagttgctggtaagaaatttgggc
gagcaggcgctgttgttggctcagtcgtgctcatcgctgccgtatttctcccatgtgctg
gaactgatggtgcatgtggtactagaggaggaggccacatctagggagcccattccggac
ccgctgctgcccactgtagccaagttcttggccgagttccccctgtttctgcgtaccatt
gtccactgtgccaggaagacagagtttaatctctggaactacctgtttgctgcggttggc
aaccctaaagatctgttcgaggagtgcatcatggcccgggatttggatacagctgcctcg
tacctcatcattctgcagaacatggaagctccagccgtgagtcgccagcacgctaccctc
ctcttcaacacggcactggaacagggaaagtgggatctctgccgtaacatgattagattc
ctcaaagctatcgggtcaggggaaagtgaaactccgcccaccacgcccaccagtcaggaa
ccaagttctacgggaggattcgagttcttcaggaatcgcagcatcagtctttctcagtca
gcagaagtggtttctacaggaaaatttaatttacagaaaaccttcagtatgccctcagga
ccctccacgaaaggtagggagagcgaatgtcctgagaacatgtacatcgacatgatgttg
tggcgacacgcacgctgtttgctcgagcagatccgtctgaaggaccttggctgtttctca
gctcagctgggcttcgagctgatcggatggttaacccgtgagcgcacgcgggttgctcgc
gttaccgacttcgtctcagcactcaaatgccttcataatgatttcctgtggcctttccct
gttctacctgccggctcacctttgaaaaacggacgctgtcggacagtgttaagtactcgc
ctggtcgcatctcagtcgaacgatagcttaatgaacaacgatatggagatgacgcctcct
caggtcacctcaaccaatcacaactggctggatggtctgaaagcacagccgaaggagatc
gattccacctcctcacacggagctccacagacccaggaagcttttctgtctcctcttatc
aataaaacggaggagtgcagtatcggttcggctacagatctaacagagacaagctccatg
gtggatggtgattggacgatggtggatgagaactactccgcactcagtcttagccagtca
gagctggagcacatttccatggagctggccaataagggtcctcacaagtctcaagtgcag
ctaaggtatttgcttcatgtgtttttggaggcgggctgtttggaatggagcgttgtgatt
ggtttgatccttcgtgacgtcaacgtcattaagcaagttttgggctttttggactgtgcc
gattctgaaaccgttcagaatgtacaagccgggctcatcgccatcgaccagtgggcctcc
tctaactgtctcggttataaggccttcctcaatctcattgctcccgagttgcaaaagctg
tgcgacgtctccgtggatcaggttcagctcgactccttccagccctccgtcaccaagttg
gctgatccggttctgccccgagtggaagagcatcgcgtgggtaccacttttaaccacccc
atgactctcgagagtccccccggctctccgcctcgcaccatcgaggaaaacggcgaggag
gaaacggaagaggaggcgggcgaggacggagcgtatgactgcacgttatcatga
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