Trichomycterus rosablanca: 134330947
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Entry
134330947 CDS
T09921
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134330947
04082 Neuroactive ligand signaling
134330947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134330947
Ion channels [BR:
trn04040
]
Ligand-gated channels
GABA-A
134330947
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
134330947
NCBI-ProteinID:
XP_062868316
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Position
16:complement(260878..302278)
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AA seq
524 aa
AA seq
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MGGHRRRRKWSGVHGGILVVMVAAVCSQSVNDPSNMAVVKETVDRLLKGYDIRLRPDFGG
PPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWV
PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLE
IESYGYTTDDIEFYWRGGDHAVTGVERIELPQFSIVEYNLISKNVVFSTGAYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGQGPQRQKRAAEKANKANNDRLRMDP
NKWLMGNVVQRNDALYARMKQRDGDARDAMWEPIFVDDAAIGLGDTKNKMDSHENILLTP
LELKNEMGPSELGLALGDPRGTMLAYDTSALQYRKAGLSRQHFGRNVLERHVAQKRSRLR
KRASQLKINIPDLTDVNSIDKWSRIIFPTVFSFFNVVYWLYYIN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggggtcacaggaggaggaggaagtggagcggggtgcacggtggcattctggtggtg
atggtggcggcggtctgttcacagagtgtgaatgaccccagtaacatggctgtggtgaag
gaaactgtggaccgactgctgaaaggatacgacatccgactccgacccgacttcggaggt
cctccggtgggagtggggatgaacattgacatcgccagtatcgacatggtatcagaagtg
aacatggattacaccctgacgatgtatttccagcaggcgtggcgagataagcgcctgtcg
tattcggagatccccctgaacctcacgctggataaccgggtggccgatcagctctgggtc
ccggatacgtacttcctcaacgacaagaagtcattcgtccacggggtgacggtgaagaac
aggatgatccggcttcaccccgacggcaccgtgctctacgggctcaggatcaccaccacg
gcggcgtgtatgatggacctgaggagatacccgctggacgaacagaactgcaccctggaa
atcgagagctacggctacaccacggacgatatcgagttctactggcggggtggagatcac
gccgttacgggggtggagaggatcgagctgcctcagttctccatcgtcgagtacaatctc
atctccaagaacgtggtcttctccacaggcgcgtacccccgcctgtccctcagcttcaaa
ctgaagaggaacatcggttacttcatcctgcagacctacatgccctccatcctgatcacc
atcctgtcctgggtctccttctggatcaactacgacgcctcggccgcccgcgtggcgtta
ggtatcacgacggtcctcaccatgaccaccatcaacacccacctgagagagacgctcccc
aagatcccctacgtcaaagccatcgacatgtacctgatgggctgcttcgtcttcgtcttc
ctggccctgctggagtacgcgctggtcaactacatcttcttcggtcaggggccgcagcgg
cagaaaagagccgccgagaaagctaacaaagctaacaacgacagactgaggatggatccc
aacaagtggttgatgggaaatgtagttcagagaaacgatgctctgtatgccagaatgaaa
cagagggacggtgacgctcgcgacgcgatgtgggaaccgatctttgtggacgatgcagcg
ataggactaggcgatacaaaaaataagatggactctcacgagaacatcctgctgacccct
ctggagctgaagaacgagatgggtccgtcagaactgggcctggctctgggcgacccgcgc
ggcaccatgctagcatacgacacctcggcgctgcagtaccgtaaggcgggactcagccgg
cagcacttcggccggaacgtgctggaacgccacgtggctcagaaacggagccggctgagg
aaacgggcgtcacagctgaagatcaacatccccgacctgaccgacgtcaactccatcgat
aagtggtccaggataatcttccccaccgtcttctccttcttcaacgtggtttactggctc
tattacatcaactag
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