Trichomycterus rosablanca: 134331149
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Entry
134331149 CDS
T09921
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134331149 (lingo3a)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134331149 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
V-set
LRR_9
Ig_6
LRRNT
Motif
Other DBs
NCBI-GeneID:
134331149
NCBI-ProteinID:
XP_062868506
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Position
17:complement(15052121..15053993)
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AA seq
606 aa
AA seq
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MAIWDCLGLLGLLLLHIAVLICQGQSCPEFCDCVPQKKSVMCQNKLLSSVPNEIPTDTEL
LNLRGNSLRWVEHRDLAAYVFLEELDLSENLISVLEPSAFSSLKNLRVLCLRTNQLKLVP
MGAFSNLANLTILDLSENKLVILLDFTFQDLHSLQKLEVGDNDLVYISNKAFLGLISLRE
LTIERCNLTSVSAQSLFYLRGLVILRLRYLNIALLEEHSFRKLGGLRGLEIDHWPYLAYI
SPYSFQGLNLSWLSITNSNITTIPTSALRTLIHLTSLNLSYNSISVIESWALRDLVRLKE
LHLVGTNLVSVQPYGLGGLQQIRLLNLSNNRLVTLEEASFHSVNNLETLRIDGNPLSCDC
RLIWMLQHHKTTLNFDGKSPVCAAPVEVQGKAFSSFSDSTLFEHFTCQRPKIRNRKLQQV
SAREGQVISFFCQAEGEPTPVIFWISPQRRRITTKSTGRIIVHPEGTLEIRYAQVTDSGT
YICIASNAGGNDTYFATLTVSGLPLDAAPRANRTYYVDDLNDTNLNDTRVFLKFTLDLKT
IMVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNLSVEYSFRKMDGPTMSGGQGGARK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgggattgcttaggactgctgggccttcttctgctacatattgcagtgctc
atatgccaaggccaaagctgtccagaattctgtgactgtgtaccacagaagaagtctgtg
atgtgccagaacaagctcctaagttctgttccaaatgaaattccaactgacactgaactg
ctaaaccttagaggcaatagtttgcgctgggtggagcacagggatttggcagcctatgta
tttctggaagagttagatctaagtgagaatcttatcagtgtgctggagcccagtgctttt
tccagcctaaagaatctacgtgtattatgcttacgaactaaccagttaaaactagtgcca
atgggtgccttttcaaatcttgccaatctaaccattttggaccttagtgaaaataaattg
gtcatcttgctagacttcacttttcaggatctgcatagcctccaaaaattagaggtgggt
gacaatgacttggtgtatatttcaaataaggcattcctgggcttaattagtcttagggag
cttactattgagaggtgcaacctgacctcagtctcagcccagtcacttttttaccttcgt
ggcttggttattctgcgactacgctaccttaacattgccttgttagaggaacattccttt
cggaaactaggtggactgcggggcctagagatagaccactggccatatctagcgtacatc
tccccatatagttttcagggtcttaatttgtcctggctgtccattaccaatagcaacata
accacaatccccactagtgcccttcgtactctcattcatttaaccagtctaaacctctca
tacaattctatctctgtgattgaatcttgggccttgcgtgacttggttcgtttgaaggaa
cttcaccttgttggcaccaacttggtttctgtgcagccttatggccttggaggtttgcaa
cagatacgtctgctcaacctgtctaacaatagattggtaacactagaggaggcctcgttc
cactctgtcaacaacctggaaactcttagaattgatggtaaccctctttcctgtgactgc
cgtcttatttggatgttgcagcaccacaagaccacacttaattttgatggtaagtcacca
gtttgtgcagcaccagttgaggtgcagggtaaagcattcagttccttctctgactcgacc
ctctttgaacatttcacctgccaacgaccaaagatccgcaaccgaaaactgcaacaagta
tctgcacgtgagggtcaggttatatcatttttctgtcaagcagaaggagaaccaacccca
gtaatcttctggatttcacctcagcgacgccgcattaccactaaaagcactggtcgcatc
attgtgcacccggaaggcacattagaaattcgctatgcccaagtaacagacagtggaacc
tacatctgtattgccagcaatgcagggggtaatgacacatattttgccactttaacagtt
agtggactgcccctagatgcagctcctagagcaaatcgcacctactatgttgatgacctt
aatgacacaaacctaaatgacacacgtgtcttcctaaagtttacgttagaccttaagacc
attatggtctctacagccatgggctgcataatgtttttgggtgtagtccttttttgcttc
atactactgtttgtatggagtcgtggacgtggtcagcacaagaacaacctctcagtagaa
tactccttcagaaaaatggatggccccacaatgagtggaggtcaaggaggtgctagaaag
tttaacatgaagatgatataa
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